rasl10a (rasl10a)


Basic Information

Item Value
gene id rasl10a
gene name rasl10a
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 19430401 ~ 19448950 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU84360
tgaaagtcctgtgtgttaACGCCCACCCATCAACTCATCCACCCCATCCACCTCCCGGCCAGCAGCGTTTTTATACAGCAGCAATCAATGTGGAGTGGCTGGATTTGCGCTGCAGAGGTGTGCGCAATGCCAACGCCTACATCCTGGTGTACGACATCTGCTGCGTGGAGAGCTTTGAATATGTCAAGATGATCAGACAGCAGATAGTGGAGCACAGGGAAGGCAGCAGTAGTGAGGTGCCGATCCTGGTGGTGGGCAACAAGAGAGATCTGCAGCGGCAGCGCTTCATGCCTCGCAGGGCGGTGTCAGTCCTGGTGAAGAAGACCTGGAAGTGTGGTTACGTGGAGTGCTCTGCCAAGTATAACTGGCACATAATCCTTCTCTTCAAAGAGCTGCTGGGCATCGCCGTGGCACGGGGCATGCGCCAGAACCACACCTCCATCCGTCTGCAGGGGGCGCTACAGAGGAACCGCTGCACCATCATGTGACCCAGAGAGCTCCCGCCACCCTCTCACCTCAGGAGTGGAGCGGCAGTGGAGAAAAAAGGACTTTTGATCTAAATGGCTGGAAAAATACCCTGTGGCCTGCTGCTTTACTGAGCTGATAGGTTTATTAGTCTTGCGCTGTAAAAGACACTCAAATTTCACACGTGATCATCCGACCACTTCCTAGTCAGATCCTGCCAAATGTGTTAATGCAAGGAAGGAGGTAGGAGAGAGAGCAAGTGAAAACCAATACGACTAGCATAGCACAGTTATTTTTTCTCTCATCAACTATACAGTTACTCATTTGAGGCTTTGCTTCCCAAAATACCCAACCGCAGGTCTCTTTGAGGGTTGTCTTGTGGCTGTAGCTGGGCCTGACAGGGTGGAAGCTGTGTTAGTGAGACTCAAAACGGAGAGGCAGCAATATCATCGAGTCTTCCTTTTGAATTTGTCATATTCAGTAAGGTCAAGAGCAGACGCTCATATCTGACATATTTGGATTTGTTTGATGGTTAATGGTTAACAAGATAGTATAATACAGAGCAAAAGAATAGTTAATGCTTTACTTCTGGGGGTATTATCTTGAAATAGATATGATtagattgtgttttattttagattCTGAGAAGTAGCCtgcattttttcccccatttcAACCTTGGCTTACAGTGAGAGATGTTTGTTCAGGCAAAGGAGGTTTTAAGGTTGTCTAGCAGCAGAAAATGCTGCAGTCCCTATCGTGATGTACTGTGTGGCTTTCATCTGCTCCCTCCTCTCATTCAGTGTCTGTTTACGTTAAATCCAGGAAACAGGGGACCTGCAGGAGGCTGCAGAGCCTGAAACAAACCCCTGTATGGTTGTTGTCATGTggatgtttatatgtgtgtgtttgtgtgtgtgagagagagagagagagagtaagaaaGCAAGACAGAGAGGCAGGTTTGAAAGCTGACATTCAGGCAAGCAAAGGACAGACAGCACGATAAGAGATGTAGATGTAGAAGCGTTGGATTAGGAAGGAGCAATAAAATCTCACAGGGACAACTGTATGACTATATGTACCAccatattatataaaaaatgccTCACATATAAGTAGACGTAATCTACTTGTGCTCATATATCCTGCAGAAATAAAGAAGCAGAGCttaaagctgtggtaggcaCTTTATTTTTGCTGTTGTTGGGCAAGTAttccataataatctttcagcatattgtaatttgAGTGGtatgagagaaaactagacttctgcacaTTCTCTTGGCTCTGTTTCCAGGCTTCAGGATATCTAGCTGTCACGGGTGACTTTggtcaatcacaggtcattGAAGAGAGATAGAGCATTCCCATTGGCtgctcagtgcatgcattgccCTTGCGACaaaaaggggagagggagagctgcTGGAAGAGATTTCATTCTACTTCCAATTCTGCCATTTTTTTGCATTCTACCCACTGCAGTTTTGAAGGGGCTGTCCTTGATATTGAGAATTATAGCAGCAGACAAATATTTGccatgtaaagatatagtggagtaatgtgtcctgagcagagaattaAGTCAcactatctctgtgtgtgttgtaaagagtttctgtgttctttgtttttgtaGCCGGTTCGACCACATGtgcatgttagtgcatgtgGCCGGGAAAAAACATAGGTGTTTCACGAATTGAGGAATGGTCTGTGAGAGCTGTGTGGAAGCAATCCCAGCccgctgttgtttttttcagtatttcaaGTACAGCCCCTTTGATGACTTCCACAAAAACACCCCATGAGTGCATCACAGGGAACCTTAATAAAGCTTTCATATCAGTATCTGAATAGTATCTAATTGGTAATGTTGTGAGATTAACagttgcttttttatttaattaggcCTAGATACAGTAGGTAGTTTGTGAACAtggctgcactgaaagtaagcAGACCTATTGTATATAAGAGTGATTCATGGAGTAATTGATTTGCATGCTTTTGTTGGTAGAGCCAACAGGTCAGGGTTTAATTGCACTGATGTGAAAATTTGATATTGTGTTTAATTTTTGTAATACAGTACATGGTTTTCTGACACTGTAATGAGCAGCTGAGTGGAGTGAATGTGGTCGTTTTTCACTGGCACGTGAGAGCACAAGCTCATGATCTCTCCAAGATGTAGTGTTGGACCCTTCAATCAGGCAGATggctgtgtttgttttattcttgtacaaaaaaagaaatatgtagCAGCAACTGTGTGTAGCATGAGTTCTCATCAGTTTGTCTGTGTGCGTTTCCAAATAAAAAGGGCTACCGTTTTTTATCAGAAACATa
>XM_039803079.1
aaagagagagagagaaagagaaagcagtCTTCACCAGCTCATGTCTCTCCAAcgacgcgcgcacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagtgctcGTTAATAGGCTCCAGATGCCTTTACAGAAAACGCGCGTGTGCATGCTGTGTGGATTGACTTTTCTCTTTTGAATCACGCAGATGTGAATCCATCTTCCTGTCATCGACAAAACAACACGATTATGGCGTTGTGTGCAATTTCAGAACACGTGGGAAGCGTATAGGCTGGCGGCTGTGCGCCCGTCCTCCCTGTGATAGAGAAGCGCGGCGGTGGTGCATCGGTGGAAATGAGTGAGAGGTGCAGAGGAGACATTCAATGAAGACCGCGAGGGCTCCTGTGCGTTTTGGGCAAGGTCAGAGTCTAGCCTGTATGAGATTATGCCCATGCGGGAACAACAAGGAATGACTTTTACGCTTCCTCACGAGGGAAGAGGTCGCCTGGGGATGTCCCCTAAAAAccaagagttttttttctctgtgttggaTCGAAGAGGCAGCGAAAATCCCTCCATCTGCATGATCATGGTTGAGCTTTAGTTTTGACAACCTTCAAGCTGCATGGCTTTCTTTTCTCACTCAGCCCGGAGATAAAGTTTCTTCGCTTTGCCCGACTGGTGGGGGATTTATTCGGCCACCGACTCGTTTCATTGCACCCAGTTAAGGTGATTTAGAGGCTGCTGGTTCAAACAAGGGGGGTGGGGGCAACGGTGGATTAAATTCCATCAGAGCAGCATCAAAACAGCGGCGGCCAGCTGTGTTTCTGGACGGTCACATCTGTTGTTGTCgtcgctgtccatggtgctgaactcGTGCTCCAGGAATGGTGGAGACGCTGAGTATCGCAGTCATCGGCGCTCCCGGAGTGGGGAAAACTTCTATAATCCGCCAGTTCATCTATAACGATTTCTCGGAGGTGTACACACCGACCAGGACCAGATATGTGTACAGACCCTCCGTCATCCTCAACGGGAACATGTATGACCTGAAGATTTTGGACGTCCCGCCAATCTCCTCCTTTCCATCCAGCTCCAGTCAGGAGTGGCTGGATTTGCGCTGCAGAGGTGTGCGCAATGCCAACGCCTACATCCTGGTGTACGACATCTGCTGCGTGGAGAGCTTTGAATATGTCAAGATGATCAGACAGCAGATAGTGGAGCACAGGGAAGGCAGCAGTAGTGAGGTGCCGATCCTGGTGGTGGGCAACAAGAGAGATCTGCAGCGGCAGCGCTTCATGCCTCGCAGGGCGGTGTCAGTCCTGGTGAAGAAGACCTGGAAGTGTGGTTACGTGGAGTGCTCTGCCAAGTATAACTGGCACATAATCCTTCTCTTCAAAGAGCTGCTGGGCATCGCCGTGGCACGGGGCATGCGCCAGAACCACACCTCCATCCGTCTGCAGGGGGCGCTACAGAGGAACCGCTGCACCATCATGTGACCCAGAGAGCTCCCGCCACCCTCTCACCTCAGGAGTGGAGCGGCAGTGGAGAAAAAAGGACTTTTGATCTAAATGGCTGGAAAAATACCCTGTGGCCTGCTGCTTTACTGAGCTGATAGGTTTATTAGTCTTGCGCTGTAAAAGACACTCAAATTTCACACGTGATCATCCGACCACTTCCTAGTCAGATCCTGCCAAATGTGTTAATGCAAGGAAGGAGGTAGGAGAGAGAGCAAGTGAAAACCAATACGACTAGCATAGCACAGTTATTTTTTCTCTCATCAACTATACAGTTACTCATTTGAGGCTTTGCTTCCCAAAATACCCAACCGCAGGTCTCTTTGAGGGTTGTCTTGTGGCTGTAGCTGGGCCTGACAGGGTGGAAGCTGTGTTAGTGAGACTCAAAACGGAGAGGCAGCAATATCATCGAGTCTTCCTTTTGAATTTGTCATATTCAGTAAGGTCAAGAGCAGACGCTCATATCTGACATATTTGGATTTGTTTGATGGTTAATGGTTAACAAGATAGTATAATACAGAGCAAAAGAATAGTTAATGCTTTACTTCTGGGGGTATTATCTTGAAATAGATATGATtagattgtgttttattttagattCTGAGAAGTAGCCtgcattttttcccccatttcAACCTTGGCTTACAGTGAGAGATGTTTGTTCAGGCAAAGGAGGTTTTAAGGTTGTCTAGCAGCAGAAAATGCTGCAGTCCCTATCGTGATGTACTGTGTGGCTTTCATCTGCTCCCTCCTCTCATTCAGTGTCTGTTTACGTTAAATCCAGGAAACAGGGGACCTGCAGGAGGCTGCAGAGCCTGAAACAAACCCCTGTATGGTTGTTGTCATGTggatgtttatatgtgtgtgtttgtgtgtgtgagagagagagagagagagtaagaaaGCAAGACAGAGAGGCAGGTTTGAAAGCTGACATTCAGGCAAGCAAAGGACAGACAGCACGATAAGAGATGTAGATGTAGAAGCGTTGGATTAGGAAGGAGCAATAAAATCTCACAGGGACAACTGTATGACTATATGTACCAccatattatataaaaaatgccTCACATATAAGTAGACGTAATCTACTTGTGCTCATATATCCTGCAGAAATAAAGAAGCAGAGCttaaagctgtggtaggcaCTTTATTTTTGCTGTTGTTGGGCAAGTAttccataataatctttcagcatattgtaatttgAGTGGtatgagagaaaactagacttctgcacaTTCTCTTGGCTCTGTTTCCAGGCTTCAGGATATCTAGCTGTCACGGGTGACTTTggtcaatcacaggtcattGAAGAGAGATAGAGCATTCCCATTGGCtgctcagtgcatgcattgccCTTGCGACaaaaaggggagagggagagctgcTGGAAGAGATTTCATTCTACTTCCAATTCTGCCATTTTTTTGCATTCTACCCACTGCAGTTTTGAAGGGGCTGTCCTTGATATTGAGAATTATAGCAGCAGACAAATATTTGccatgtaaagatatagtggagtaatgtgtcctgagcagagaattaAGTCAcactatctctgtgtgtgttgtaaagagtttctgtgttctttgtttttgtaGCCGGTTCGACCACATGtgcatgttagtgcatgtgGCCGGGAAAAAACATAGGTGTTTCACGAATTGAGGAATGGTCTGTGAGAGCTGTGTGGAAGCAATCCCAGCccgctgttgtttttttcagtatttcaaGTACAGCCCCTTTGATGACTTCCACAAAAACACCCCATGAGTGCATCACAGGGAACCTTAATAAAGCTTTCATATCAGTATCTGAATAGTATCTAATTGGTAATGTTGTGAGATTAACagttgcttttttatttaattaggcCTAGATACAGTAGGTAGTTTGTGAACAtggctgcactgaaagtaagcAGACCTATTGTATATAAGAGTGATTCATGGAGTAATTGATTTGCATGCTTTTGTTGGTAGAGCCAACAGGTCAGGGTTTAATTGCACTGATGTGAAAATTTGATATTGTGTTTAATTTTTGTAATACAGTACATGGTTTTCTGACACTGTAATGAGCAGCTGAGTGGAGTGAATGTGGTCGTTTTTCACTGGCACGTGAGAGCACAAGCTCATGATCTCTCCAAGATGTAGTGTTGGACCCTTCAATCAGGCAGATggctgtgtttgttttattcttgtacaaaaaaagaaatatgtagCAGCAACTGTGTGTAGCATGAGTTCTCATCAGTTTGTCTGTGTGCGTTTCCAAATAAAAAGGGCTACCGTTTTTTATCAGAAA

Function

symbol description
rasl10a Predicted to enable GTP binding activity and GTPase activity. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Orthologous to several human genes including RASL10B (RAS like family 10 member B).

NR:

description
ras-like protein family member 10B

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07851 RASL10B; Ras-like protein family member 10B

RNA

RNA id representative length rna type GC content exon number start site end site
TU84360 False 2817 TUCP 0.44 3 19434907 19448950
XM_039803079.1 True 3844 mRNA 0.46 3 19430401 19448946

Neighbor

gene id symbol gene type direction distance location
ap1b1 ap1b1,LOC102786025 coding upstream 2684 19399883 ~ 19427717 (+)
gas2l1 gas2l1 coding upstream 31148 19376194 ~ 19399253 (+)
ewsr1b ewsr1,LOC102785556 coding upstream 57792 19364006 ~ 19372609 (+)
emid1 emid1 coding upstream 73255 19298555 ~ 19357146 (+)
dnah10 dnah10 coding upstream 133727 19269536 ~ 19296674 (+)
osbp2b LOC104966002,LOC107394196,LOC103353525 coding downstream 5298 19454248 ~ 19504544 (+)
si:ch211-102c2.8 NA coding downstream 69226 19518176 ~ 19532323 (+)
tcn2 NA coding downstream 87352 19536302 ~ 19540034 (+)
dguok LOC104941578,LOC108234509,LOC102204634,LOC103375338 coding downstream 91300 19540250 ~ 19544265 (+)
spaw NA coding downstream 95379 19544329 ~ 19547286 (+)
LOC120560789 NA non-coding upstream 276817 19151533 ~ 19153584 (+)
G62836 NA non-coding upstream 343539 19084934 ~ 19086862 (+)
G62796 NA non-coding upstream 447778 18966083 ~ 18982623 (+)
G62755 NA non-coding upstream 565594 18864575 ~ 18864807 (+)
G62741 NA non-coding upstream 657293 18772755 ~ 18773108 (+)
G63005 LOC104920315,LOC103374896,LOC100704901 non-coding downstream 100460 19549410 ~ 19554906 (+)
G63007 NA non-coding downstream 106433 19555383 ~ 19562350 (+)
G63015 LOC107394186,LOC104941583 non-coding downstream 126611 19575561 ~ 19633642 (+)
G63016 NA non-coding downstream 133022 19581972 ~ 19584473 (+)
G63029 NA non-coding downstream 207282 19656232 ~ 19656496 (+)
tmem119a LOC103353570,LOC104946818 other upstream 348747 19076561 ~ 19081654 (+)
mvk mvk,LOC102798305 other upstream 688002 18737518 ~ 18742399 (+)
acacb acacb other upstream 744938 18661157 ~ 18685463 (+)
tpcn1 tpcn1 other upstream 955670 18441347 ~ 18474731 (+)
tbx5b tbx5,LOC103470367 other upstream 1010811 18407348 ~ 18419590 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 310646 19759596 ~ 19763524 (+)
vps13a vps13a other downstream 951997 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 1024701 20473651 ~ 20490586 (+)
G63480 rbm19 other downstream 1227467 20676417 ~ 20677916 (+)
LOC120560787 NA other downstream 2139926 21588876 ~ 21599289 (+)

Expression


Co-expression Network