G63005 (LOC104920315,LOC103374896,LOC100704901)


Basic Information

Item Value
gene id G63005
gene name LOC104920315,LOC103374896,LOC100704901
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 19549410 ~ 19554906 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU84387
CAATCAATGCATACTATAGAATACAAACGACAAAAAGAGTGTTTGTTTCAATGGTGTttgctttaatgctttaaatACAAACCGTGTGAAAATCTGTTTCAAAAATTTCATCAACACAATTATGTTTTACATTCCCTGTATGACACTTCAGGTGAATACCCTTTTTTTTAAGAGCACGGTCGACAAATTATATTGTATCTTAAACATTTCAAGGCAATATCTGAACAGAGGTGTCAGGAACTGTGTGGAAATAAAGCACATCAAGTTAAAAACCCTTTTGGAATGGTTTAAATTCAGCAAacttaatttttctttttcccctaTTGATATTAATTTTCATTAACTTATACCATTTCTTAGGGATGAGGCTTTGTTGGTGTTAAGTACTTCTCAGGGTTGATTTTAAACTTGTAGCCAGTAGAGGAAGGCACACCTTGTCATACATAAATCAGGTTTAAGCCTTGAAGATGACAGAAAAAGTTTCATTACAGATTTGTTCTTGGCAAAACAAGCAAATGATACTGATAAAGACAGACTTTAAAACACTAAGACACTGGAGATACTGAAGGTGAACCTCTGCCTTAATGGAACGGATGATGGGAAATAAGAATGTGCTCCTGAGCCGGTCTTCACAGCTTCTTGTTGGTAAGTCTGACATCTTGACACTCGTTCCAGGTCCTCCTAGATGTCCATTTCAAACTGTGAGTCATCACCAGTGCTGCTGCTATCAGGTGCAGTGATATTGTTGTTGAGTAGTTCTCCATTATGAGCCTTCTGATCTGTGTCTTTGGAGGGAGGACTTGTCACCCCTGGAATTTTGGGCAGACCTTTTGGAGGAGTCTTGGCCACGGGAGAGCTGCGACAACCCAGCAGGAACTTTCGGTCGTAGATGATCCTGGTACCACCCGGGGTTGTGCTGAACAGGGTCCCTCCGGGAGTAGTGGAGTAGTCGTGGGGCATGTGCGCCGCGTCGTTAATGGTCACCCTCCTGGTCGACGGGATGGCCTTGGCAGTGGTCTTCTGGCAGTCAGTGGACATCTTGTCTCAACTATAATAACTAAAACTAGCTAACTAAATAGTACGAACCAGGCGGAAAGTCTTAGTTTTACAAAACAACAAAGCCACACCGCGCTTGTGTTTGGCTCAACAGAATGGCTAGTTTcggataaataaaaataaatacctcTTAATCATAAGTGCAAATGATGAAATGTAGTATCGTCACATTACAACACGCAGTCTCACACACTTGTGTACCGGTTCTTTCTTTAAAAGGACCCAGGTACACGTTCCTCTGCTTTCCCTCACCCTCTAGTATGCACACAGACAGGCTGAGGCTGCAGGGGAAA

Function

NR:

description
PREDICTED: eukaryotic translation initiation factor 4E-binding protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84387 True 1349 lncRNA 0.42 3 19549410 19554906

Neighbor

gene id symbol gene type direction distance location
spaw NA coding upstream 2124 19544329 ~ 19547286 (+)
dguok LOC104941578,LOC108234509,LOC102204634,LOC103375338 coding upstream 5145 19540250 ~ 19544265 (+)
tcn2 NA coding upstream 9376 19536302 ~ 19540034 (+)
si:ch211-102c2.8 NA coding upstream 17087 19518176 ~ 19532323 (+)
osbp2b LOC104966002,LOC107394196,LOC103353525 coding upstream 44866 19454248 ~ 19504544 (+)
sftpbb sftpb coding downstream 194295 19749201 ~ 19753977 (+)
selenom selenom,LOC100701119,LOC101070319,LOC101478641 coding downstream 245216 19800122 ~ 19806542 (+)
mthfd2 mthfd2,LOC103363193 coding downstream 328304 19883210 ~ 19887470 (+)
arl6ip4 arl6ip4,LOC102787162 coding downstream 334344 19889250 ~ 19891659 (+)
mtrfr clg12h12orf65,LOC102787453,LOC102198566,LOC102302482,LOC104962307 coding downstream 386567 19941473 ~ 19942849 (+)
LOC120560789 NA non-coding upstream 395826 19151533 ~ 19153584 (+)
G62836 NA non-coding upstream 462548 19084934 ~ 19086862 (+)
G62796 NA non-coding upstream 566787 18966083 ~ 18982623 (+)
G62755 NA non-coding upstream 684603 18864575 ~ 18864807 (+)
G62741 NA non-coding upstream 776302 18772755 ~ 18773108 (+)
G63007 NA non-coding downstream 477 19555383 ~ 19562350 (+)
G63015 LOC107394186,LOC104941583 non-coding downstream 20655 19575561 ~ 19633642 (+)
G63016 NA non-coding downstream 27066 19581972 ~ 19584473 (+)
G63029 NA non-coding downstream 101326 19656232 ~ 19656496 (+)
G63068 LOC103148513,LOC106959092,LOC106925485,LOC102232144 non-coding downstream 161592 19716498 ~ 19717475 (+)
rasl10a rasl10a other upstream 100460 19430401 ~ 19448950 (+)
tmem119a LOC103353570,LOC104946818 other upstream 467756 19076561 ~ 19081654 (+)
mvk mvk,LOC102798305 other upstream 807011 18737518 ~ 18742399 (+)
acacb acacb other upstream 863947 18661157 ~ 18685463 (+)
tpcn1 tpcn1 other upstream 1074679 18441347 ~ 18474731 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 204690 19759596 ~ 19763524 (+)
vps13a vps13a other downstream 846041 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 918745 20473651 ~ 20490586 (+)
G63480 rbm19 other downstream 1121511 20676417 ~ 20677916 (+)
LOC120560787 NA other downstream 2033970 21588876 ~ 21599289 (+)

Expression


Co-expression Network