c6h2orf68 (c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309)


Basic Information

Item Value
gene id c6h2orf68
gene name c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 19759596 ~ 19763524 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU84494
TGAACgtaagctagctaacgttatacaTGCTAGCTGAACTAGCATTTAGCTAGGTTGTTAGGAGATAATGGATTTGAAACACAGAGTGAATTTGAAGGGTGGTAAGTTACATTTGTTTAAGCCAGTTCAAATTACACTGTAGTGGTAGCTACTTGTTGATCTGCCTATGTGTGACTGGTCCGACATGTGAATAAAATCTCAcgcactttcatctggcttctACAAGTAGCATTGGTTAGCTCTATGTggttggctaacgttacctgctaaGCTAACGTCGCACACACGTTAGAAGTAAACAAACGTACCTCGGTCTTCGTTGTCATCATCGTCCACTTCAACCTCTCTTTCTCGTTTCAGAGAAACCATCGTAACAGGATGACTATGATAAAGAGGTGAAGCAAGCAAAAGAGGTGAAGCAAGCTAAAGAGCTTCAGCGGCGGAGGCACACCACAACCCCTAGACGACCCCGTCGACCTGATATTCAAGTGTACCATCCTCGACGCAGACATGGATCAGAGCCGGGGGCCAGTGCTGAGGCTGAAGAGTCTAATGAGAGTGGGTCGAGCACAGAGACGGAGACCCATGGTACTGAACTCTTCTGGCTTGACTATCAGGCAGACTCTGGTACCATTACCTCCTTCCTTGTGCACAAGGAGGATAATCCTGAGAAGGTGGTGGAACGTGTCACAGAGAACAATATCCTAGATTCAGCCATGAGGGCAGCTCTAGAGGCTCGACTTCAAAAGGAAATTGACAAAAGACGAGACAAACGCTGAGTGATATTCTCAAATAGTAGATTATGATGACAGAGGGGCTACACGCAAAGAGGAGCAAGACTTCATTTGCAGTTCTACACTCCTAGAAAGCATCAATGCTGTTGACAGTGTAAAAGGAGGACTCTGGGATCATGAACAGTGACTGTCAGAAGAGATCCAACTTGATGAGCCACAAATAATCCGTCTTCTGTTTTCTAAGGAGAAGGAACAGCACTTATCAAAGACAGTATAGTTGGGAGTTGACTGTCATGTTTACTACATTTTACTCCCCGTGGATTGTTACCTCATACCCTCATTCATAACTTTAAGGACACGTTGTGAGAGAGCACTGTTAACCATCCTCCTCTGTTGAACATGTCCTGTGTTTCTTGTGTTTACAAAGATCTAGTTTTTTATAAACAAGATTTTGACTTTTCTTGGAAAAATGCTGTGAAGGGAACATCAGTCTATCAGCGATTCTATGTTTAGAAATGTGAGAATTTAGTTTGGTTTCTTTTTGAGTTGGAGTTTAGTGGATGTCcatgatgtgtttgtgtggaaactgtgtttcattgttttcagtattctaatttattttagattgttgaaatacttttatttttgatactgtaatattttgagGACACAACTCAGTATATGTATAAAatgacacatatatatataaaggc
>TU84495
TCTGGATGAGACCAATCATTAGCGTCATTAGCTCACAGATACTGTCACCGCATTTAAGCTGTTTGTTAAAATGGACATGTTAAGAGACGAAGAAGTGCATGAGCTGAAATACAAACCTGGGGGCCGCTTGGATATGAGCCATGGCTTCCTGCACCATATCCGGAGGAACCAGATTGCTAGGTTATTTCCTCAACTAGCTACcgttagctaatgctagtagctagcCTACAAGCTAGTTCACAATATCTAGAGCTTCaaccacactttttttttaatagaagtCAGTCTGGTGGTAAAGGAAGGTTCAGTAGCAGGGCAGGTACAATTATATACAGCTTATTTTACGTTAAAAGTGAAACTATAAAGAAAGGTCGCACAGGCTGCCAAAGTTATCATTTGTTTAGGATACTGCTGGAGGCAAAACaacataacgttagctaaaaaagGTCCAGGTTTGTCAGTGTTGCATGCTGTTATCAGATGTAAGTCAGCGTTTACCCTCACAGAACAGGCGATTCGGCTGGACATGTTTTTCAGACAGGACCTCCGTAAGATGAAGAAATAAAAGGATGACTATGATAAAGAGGTGAAGCAAGCAAAAGAGGTGAAGCAAGCTAAAGAGCTTCAGCGGCGGAGGCACACCACAACCCCTAGACGACCCCGTCGACCTGATATTCAAGTGTACCATCCTCGACGCAGACATGGATCAGAGCCGGGGGCCAGTGCTGAGGCTGAAGAGTCTAATGAGAGTGGGTCGAGCACAGAGACGGAGACCCATGGTACTGAACTCTTCTGGCTTGACTATCAGGCAGACTCTGGTACCATTACCTCCTTCCTTGTGCACAAGGAGGATAATCCTGAGAAGGTGGTGGAACGTGTCACAGAGAACAATATCCTAGATTCAGCCATGAGGGCAGCTCTAGAGGCTCGACTTCAAAAGGAAATTGACAAAAGACGAGACAAACGCTGAGTGATATTCTCAAATAGTAGATTATGATGACAGAGGGGCTACACGCAAAGAGGAGCAAGACTTCATTTGCAGTTCTACACTCCTAGAAAGCATCAATGCTGTTGACAGTGTAAAAGGAGGACTCTGGGATCATGAACAGTGACTGTCAGAAGAGATCCAACTTGATGAGCCACAAATAATCCGTCTTCTGTTTTCTAAGGAGAAGGAACAGCACTTATCAAAGACAGTATAGTTGGGAGTTGACTGTCATGTTTACTACATTTTACTCCCCGTGGATTGTTACCTCATACCCTCATTCATAACTTTAAGGACACGTTGTGAGAGAGCACTGTTAACCATCCTCCTCTGTTGAACATGTCCTGTGTTTCTTGTGTTTACAAAGATCTAGTTTTTTATAAACAAGATTTTGACTTTTCTTGGAAAAATGCTGTGAAGGGAACATCAGTCTATCAGCGATTCTATGTTTAGAAATGTGAGAATTTAGTTTGGTTTCTTTTTGAGTTGGAGTTTAGTGGATGTCcatgatgtgtttgtgtggaaactgtgtttcattgttttcagtattctaatttattttagattgttgaaatacttttatttttgatactgtaatattttgagGACACAACTCAGTATATGTATAAAatgacacatatatatataaaggc
>XM_039803001.1
TACTGTCACCGCATTTAAGCTGTTTGTTAAAATGGACATGTTAAGAGACGAAGAAGTGCATGAGCTGAAATACAAACCTGGGGGCCGCTTGGATATGAGCCATGGCTTCCTGCACCATATCCGGAGGAACCAGATTGCTAGGGATGACTATGATAAAGAGGTGAAGCAAGCAAAAGAGGTGAAGCAAGCTAAAGAGCTTCAGCGGCGGAGGCACACCACAACCCCTAGACGACCCCGTCGACCTGATATTCAAGTGTACCATCCTCGACGCAGACATGGATCAGAGCCGGGGGCCAGTGCTGAGGCTGAAGAGTCTAATGAGAGTGGGTCGAGCACAGAGACGGAGACCCATGGTACTGAACTCTTCTGGCTTGACTATCAGGCAGACTCTGGTACCATTACCTCCTTCCTTGTGCACAAGGAGGATAATCCTGAGAAGGTGGTGGAACGTGTCACAGAGAACAATATCCTAGATTCAGCCATGAGGGCAGCTCTAGAGGCTCGACTTCAAAAGGAAATTGACAAAAGACGAGACAAACGCTGAGTGATATTCTCAAATAGTAGATTATGATGACAGAGGGGCTACACGCAAAGAGGAGCAAGACTTCATTTGCAGTTCTACACTCCTAGAAAGCATCAATGCTGTTGACAGTGTAAAAGGAGGACTCTGGGATCATGAACAGTGACTGTCAGAAGAGATCCAACTTGATGAGCCACAAATAATCCGTCTTCTGTTTTCTAAGGAGAAGGAACAGCACTTATCAAAGACAGTATAGTTGGGAGTTGACTGTCATGTTTACTACATTTTACTCCCCGTGGATTGTTACCTCATACCCTCATTCATAACTTTAAGGACACGTTGTGAGAGAGCACTGTTAACCATCCTCCTCTGTTGAACATGTCCTGTGTTTCTTGTGTTTACAAAGATCTAGTTTTTTATAAACAAGATTTTGACTTTTCTTGGAAAAATGCTGTGAAGGGAACATCAGTCTATCAGCGATTCTATGTTTAGAAATGTGAGAATTTAGTTTGGTTTCTTTTTGAGTTGGAGTTTAGTGGATGTCcatgatgtgtttgtgtggaaactgtgtttcattgttttcagtattctaatttattttagattgttgaaatacttttatttttgatactgtaatattttgagGACACAACTCAGTATATGTATAAAatgacacatatatatataaaggcaTTTATGACTGTCCAAATGTGTCATAAAATGATATGCTGTTAAAACACTCAAATCGGGGAATAACTTTGATCACTTCTATCCTGAAATATACATATTGGTGGGAATATAGAATTGAAAAATACTTACTGAAGAACAGCAAAATACTGTATCACTTTAAACTGAGTGATCGAAGTGTTTCACATCATGTCCTCAGCAGGTGGCAGTATGAATCAGCTTTTCAGACTGCATGCCATCTTCTGTGtctaaactctttttttttttttatcataagtCAAAGCAGTGGATAGTAGCACTGTGTTACAAGAATACAAGACAAATAGCCAAACTGTAATTTTCTATACACAAGAAATGAACAGCTATTCTCAATCCTTCTGAAATGTCACTTCTGTGGGCAAGGACACTTCAGGTACTACTTGTTGAACTTGCATCATTTTTTACTCAAAAGGTAGAAATAAACTGGAGAGCTAAA
>XM_039803002.1
ACCAGACAAGACTGAATCAGCTGCAGAGCTATAGGGGAGGACAAGACTAACTAACTTTTAGCACTAACATTGGCTATGCACATTTAACAATCTTGCCTGTTTATGGTGTCAAGGGATGACTATGATAAAGAGGTGAAGCAAGCAAAAGAGGTGAAGCAAGCTAAAGAGCTTCAGCGGCGGAGGCACACCACAACCCCTAGACGACCCCGTCGACCTGATATTCAAGTGTACCATCCTCGACGCAGACATGGATCAGAGCCGGGGGCCAGTGCTGAGGCTGAAGAGTCTAATGAGAGTGGGTCGAGCACAGAGACGGAGACCCATGGTACTGAACTCTTCTGGCTTGACTATCAGGCAGACTCTGGTACCATTACCTCCTTCCTTGTGCACAAGGAGGATAATCCTGAGAAGGTGGTGGAACGTGTCACAGAGAACAATATCCTAGATTCAGCCATGAGGGCAGCTCTAGAGGCTCGACTTCAAAAGGAAATTGACAAAAGACGAGACAAACGCTGAGTGATATTCTCAAATAGTAGATTATGATGACAGAGGGGCTACACGCAAAGAGGAGCAAGACTTCATTTGCAGTTCTACACTCCTAGAAAGCATCAATGCTGTTGACAGTGTAAAAGGAGGACTCTGGGATCATGAACAGTGACTGTCAGAAGAGATCCAACTTGATGAGCCACAAATAATCCGTCTTCTGTTTTCTAAGGAGAAGGAACAGCACTTATCAAAGACAGTATAGTTGGGAGTTGACTGTCATGTTTACTACATTTTACTCCCCGTGGATTGTTACCTCATACCCTCATTCATAACTTTAAGGACACGTTGTGAGAGAGCACTGTTAACCATCCTCCTCTGTTGAACATGTCCTGTGTTTCTTGTGTTTACAAAGATCTAGTTTTTTATAAACAAGATTTTGACTTTTCTTGGAAAAATGCTGTGAAGGGAACATCAGTCTATCAGCGATTCTATGTTTAGAAATGTGAGAATTTAGTTTGGTTTCTTTTTGAGTTGGAGTTTAGTGGATGTCcatgatgtgtttgtgtggaaactgtgtttcattgttttcagtattctaatttattttagattgttgaaatacttttatttttgatactgtaatattttgagGACACAACTCAGTATATGTATAAAatgacacatatatatataaaggcaTTTATGACTGTCCAAATGTGTCATAAAATGATATGCTGTTAAAACACTCAAATCGGGGAATAACTTTGATCACTTCTATCCTGAAATATACATATTGGTGGGAATATAGAATTGAAAAATACTTACTGAAGAACAGCAAAATACTGTATCACTTTAAACTGAGTGATCGAAGTGTTTCACATCATGTCCTCAGCAGGTGGCAGTATGAATCAGCTTTTCAGACTGCATGCCATCTTCTGTGtctaaactctttttttttttttatcataagtCAAAGCAGTGGATAGTAGCACTGTGTTACAAGAATACAAGACAAATAGCCAAACTGTAATTTTCTATACACAAGAAATGAACAGCTATTCTCAATCCTTCTGAAATGTCACTTCTGTGGGCAAGGACACTTCAGGTACTACTTGTTGAACTTGCATCATTTTTTACTCAAAAGGTAGAAATAAACTGGAGAGCTAAA

Function

NR:

description
PREDICTED: UPF0561 protein C2orf68 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84494 False 1447 lncRNA 0.42 4 19759812 19763054
TU84495 False 1638 lncRNA 0.42 4 19760754 19763054
XM_039803001.1 True 1682 mRNA 0.40 4 19760793 19763524
XM_039803002.1 False 1654 mRNA 0.40 4 19759596 19763524

Neighbor

gene id symbol gene type direction distance location
sftpbb sftpb coding upstream 5619 19749201 ~ 19753977 (+)
spaw NA coding upstream 212310 19544329 ~ 19547286 (+)
dguok LOC104941578,LOC108234509,LOC102204634,LOC103375338 coding upstream 215331 19540250 ~ 19544265 (+)
tcn2 NA coding upstream 219562 19536302 ~ 19540034 (+)
si:ch211-102c2.8 NA coding upstream 227273 19518176 ~ 19532323 (+)
selenom selenom,LOC100701119,LOC101070319,LOC101478641 coding downstream 36598 19800122 ~ 19806542 (+)
mthfd2 mthfd2,LOC103363193 coding downstream 119686 19883210 ~ 19887470 (+)
arl6ip4 arl6ip4,LOC102787162 coding downstream 125726 19889250 ~ 19891659 (+)
mtrfr clg12h12orf65,LOC102787453,LOC102198566,LOC102302482,LOC104962307 coding downstream 177949 19941473 ~ 19942849 (+)
kmt5ab LOC102787754 coding downstream 180304 19943828 ~ 19948469 (+)
G63076 LOC103376870 non-coding upstream 12127 19746949 ~ 19747469 (+)
G63068 LOC103148513,LOC106959092,LOC106925485,LOC102232144 non-coding upstream 42121 19716498 ~ 19717475 (+)
G63029 NA non-coding upstream 103100 19656232 ~ 19656496 (+)
G63015 LOC107394186,LOC104941583 non-coding upstream 125954 19575561 ~ 19633642 (+)
G63016 NA non-coding upstream 175123 19581972 ~ 19584473 (+)
G63087 NA non-coding downstream 17441 19780965 ~ 19832327 (+)
G63128 NA non-coding downstream 109577 19873101 ~ 19875144 (+)
G63189 NA non-coding downstream 251480 20015004 ~ 20015249 (+)
G63190 NA non-coding downstream 252708 20016232 ~ 20016661 (+)
G63192 NA non-coding downstream 254593 20018117 ~ 20018412 (+)
rasl10a rasl10a other upstream 310646 19430401 ~ 19448950 (+)
tmem119a LOC103353570,LOC104946818 other upstream 677942 19076561 ~ 19081654 (+)
mvk mvk,LOC102798305 other upstream 1017197 18737518 ~ 18742399 (+)
acacb acacb other upstream 1074133 18661157 ~ 18685463 (+)
tpcn1 tpcn1 other upstream 1284865 18441347 ~ 18474731 (+)
vps13a vps13a other downstream 637423 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 710127 20473651 ~ 20490586 (+)
G63480 rbm19 other downstream 912893 20676417 ~ 20677916 (+)
LOC120560787 NA other downstream 1825352 21588876 ~ 21599289 (+)
G63905 NA other downstream 3166375 22929899 ~ 22930205 (+)

Expression


Co-expression Network