G63087


Basic Information

Item Value
gene id G63087
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 19780965 ~ 19832327 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU84504
ATGTTATGTACATAAGTTTGTTTTGTTGCACCTTTGATCAATATGTTTTCACTTATTctgatatataaaaatataagaaACAATAGATTACAATGTAATTACCCATTTTTCAAGCAATGACAATACATATGAAAAGACtcaggaaacacacagacagcacaatTTGAAAGGGAGTATATTTTTTCTTTGGACAGTGTTGCACTAGTTTTTAGGTTAAAGAACAAAGCAAGCAACCCCTAAAACCCTTTTGCTTCATTCATCAGATGATTTCACAGAGATAAACAATTTTCATATGCCATCAGTTAGTATATCACAGGCttgctatttttttatttcattcacaATTACACAACAACCGGTAGACTAAACAATCTACACTTCAGACAATAAAAGCAAAATTTTATCTGGATTTACTAAAATGGCAAACTGGAGAAATCAGACACTCTCTTCATAGTTGCTTTTAAAGCAAGAAAATAATTATCAATATTCTGTAATATCCATTGAAATAATGCTCCCTCACTGGCCAGCAGAATTCAGGCTCATTTAACAgttaaataagaaaataaatacataatttaagTAAAATAATCTTTGTGGCATAGATTGTCTCCTATTATGTTTTCTACCATACTTAATATTTGTCCTTTACGTACATATTTCTTCTATTTTAGCCACTTCATTATAAAACAATAACATTCTGTAGACACAGCATTTTTTTCCATTAACATTTCACATTAGATAGTCACTGGTCATGACTGCAGAACTGAccatacttacttacttaaattACTTAAAGCAGGACACAGTCATACAATCTTAATCTCTTTTTAAACAAGTTACTCTAAACAAATGTCCAttagatttttcattttcaaaaacaataaaaatacatgaaTGCACTATGAAATTAGTCAAACAATTTCAGATTACTGCATAAGCATAATTGCCCTGCATTTTCTTCACCTAACACTTACACTGAAGTAAAATTTTTATACTGTCCTTACCAAGTTTTTCTAACAATTTTCACAGCCACAATTATAACAAATAGGAgtcaaaaacagcactttacGGCACAAAAATCACAGTACcggaatgtacagtatgtccagCAGCAAACCATGCAAACACAGTCACACCCCCTtcactgccacacacacacacacacacacacacacacacacacacacacacacacacaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84504 True 1204 lncRNA 0.32 2 19780965 19832327

Neighbor

gene id symbol gene type direction distance location
sftpbb sftpb coding upstream 26988 19749201 ~ 19753977 (+)
spaw NA coding upstream 233679 19544329 ~ 19547286 (+)
dguok LOC104941578,LOC108234509,LOC102204634,LOC103375338 coding upstream 236700 19540250 ~ 19544265 (+)
tcn2 NA coding upstream 240931 19536302 ~ 19540034 (+)
si:ch211-102c2.8 NA coding upstream 248642 19518176 ~ 19532323 (+)
mthfd2 mthfd2,LOC103363193 coding downstream 50883 19883210 ~ 19887470 (+)
arl6ip4 arl6ip4,LOC102787162 coding downstream 56923 19889250 ~ 19891659 (+)
mtrfr clg12h12orf65,LOC102787453,LOC102198566,LOC102302482,LOC104962307 coding downstream 109146 19941473 ~ 19942849 (+)
kmt5ab LOC102787754 coding downstream 111501 19943828 ~ 19948469 (+)
LOC120560983 NA coding downstream 151508 19983835 ~ 19984968 (+)
G63076 LOC103376870 non-coding upstream 33496 19746949 ~ 19747469 (+)
G63068 LOC103148513,LOC106959092,LOC106925485,LOC102232144 non-coding upstream 63490 19716498 ~ 19717475 (+)
G63029 NA non-coding upstream 124469 19656232 ~ 19656496 (+)
G63015 LOC107394186,LOC104941583 non-coding upstream 147323 19575561 ~ 19633642 (+)
G63016 NA non-coding upstream 196492 19581972 ~ 19584473 (+)
G63128 NA non-coding downstream 40774 19873101 ~ 19875144 (+)
G63189 NA non-coding downstream 182677 20015004 ~ 20015249 (+)
G63190 NA non-coding downstream 183905 20016232 ~ 20016661 (+)
G63192 NA non-coding downstream 185790 20018117 ~ 20018412 (+)
G63202 NA non-coding downstream 192586 20024913 ~ 20025748 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other upstream 17441 19759596 ~ 19763524 (+)
rasl10a rasl10a other upstream 332015 19430401 ~ 19448950 (+)
tmem119a LOC103353570,LOC104946818 other upstream 699311 19076561 ~ 19081654 (+)
mvk mvk,LOC102798305 other upstream 1038566 18737518 ~ 18742399 (+)
acacb acacb other upstream 1095502 18661157 ~ 18685463 (+)
vps13a vps13a other downstream 568620 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 641324 20473651 ~ 20490586 (+)
G63480 rbm19 other downstream 844090 20676417 ~ 20677916 (+)
LOC120560787 NA other downstream 1756549 21588876 ~ 21599289 (+)
G63905 NA other downstream 3097572 22929899 ~ 22930205 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G999284 LOC106580349 non-coding NC_048575.1 CM023229.2 59000591 ~ 59003372 (-)