G63468


Basic Information

Item Value
gene id G63468
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 20646192 ~ 20647497 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU85070
GCTCGTCAATGCTGGTGCTGGGTGCATGAGAATGAACCAGCAGCGATCTGAGATTTTGTCCCAATTTTCAGATTGGACAACAAGGAACTTTGAAAATCTTGATttcagactctttttttttttccccagtgtgCATCTTTCACTACACAATGATGAAGAATGTTTTTCTGTGCTCGCTCCATCTGAACTGACAGCATATATTTAAGTATGTGTGTATCAGTTTTTAACTCTTTTGTGATTAGGATCACAAAGATCAAACCTAATGCATTCTTTCCTTGAGCCAGATAAAAGATATTTTCTGCCATTGAATAGATTTCAGCCCACCTGATTGCATTACAGATTTGAGACCACCAGTTATAACTTGTGCAGTATTTGAAGTGCAGTGTGGAATGTAGAATTTGGTTTTATCTgttttttctttgatttctaagatttttaagattgtttttacCTGGTCAACAACTTTTAACAGCTTCTGATTTAATTAAGTGTATCTGTTTTTGCTTCAATAGAATGATAGATACAGATCACTGTGTAAAACCAGCTAACATATTTTGTTAAGAGAAATAACCTTCTTGATGAGGAGACAGATGATGAGGTCAGAGAAGGACAtgaatttcttttataaattatgATTTTAGTTCTTACAACTTTTGCTAATGTCTATATTTTTGTTCAGTAACTTTTATAGTGATATTCACACATTTTTAAGGTGTGAAGGGGTGgactgttaggttgtaaaaagttaaaaccatgcttatgttttgaaaacattgtttaatgGGGCCAGCAGCTAAATCTAATCAAGTAactacactaatcagcatttgtctggctcacaccaGGTCATATCAGTCATTTAGCATACAGGAGAAAGCTCCTTGTCTCCACACATGGAGATCTATTGTATCTGTTTTTGGGGAGCCACCCCCTGTTGGGCCAGACTTGTTTAGAACAAAAAATGTGTATCTCTGTAAACGTGAATATAATCAGCACTACCATGATAattgacctttgtctgtgacctggagttaatctaatcagaggtgtgtccttaatcTGAGAGACCTCTGACCAATAGGGAAAGATTTAATTTGAGGAACCACCCAGGTGTAGGGAATAAATGTGGAATCCAGGGAAGGTCTCGgggcttcaatctgtgaccccgcaagggaagcattttgaagaccactgtttacagtgtattgttttgttatgtcgcatggctgctaactgtgacccgacaggggaagcatgttttgcagtctgctgctggcagtgttttatgttttatgattgattgtgt
>TU85071
CTGAGATTTTGTCCCAATTTTCAGATTGGACAACAAGGAACTTTGAAAATCTTGATttcagactctttttttttttccccagtgtgCATCTTTCACTACACAATGATGAAGAATGTTTTTCTGTGCTCGCTCCATCTGAACTGACAGCATATATTTAAGTATGTGTGTATCAGTTTTTAACTCTTTTGTGATTAGGATCACAAAGATCAAACCTAATGCATTCTTTCCTTGAGCCAGATAAAAGATATTTTCTGCCATTGAATAGATTTCAGCCCACCTGATTGCATTACAGATTTGAGACCACCAGTTATAACTTGTGCAGTATTTGAAGTGCAGTGTGGAATGTAGAATTTGGTTTTATCTgttttttctttgatttctaagatttttaagattgtttttacCTGGTCAACAACTTTTAACAGCTTCTGATTTAATTAAGTGTATCTGTTTTTGCTTCAATAGAATGATAGATACAGATCACTGTGTAAAACCAGCTAACATATTTTGTTAAGAGAAATAACCTTCTTGATGAGGAGACAGATGATGAGGTCAGAGAAGGACAtgaatttcttttataaattatgATTTTAGTTCTTACAACTTTTGCTAATGTCTATATTTTTGTTCAGTAACTTTTATAGTGATATTCACACATTTTTAAGGTGTGAAGGGGTGgactgttaggttgtaaaaagttaaaaccatgcttatgttttgaaaacattgtttaatgGGGCCAGCAGCTAAATCTAATCAAGTAactacactaatcagcatttgtctggctcacaccaGGTCATATCAGTCATTTAGCATACAGGAGAAAGCTCCTTGTCTCCACACATGGAGATCTATTGTATCTGTTTTTGGGGAGCCACCCCCTGTTGGGCCAGACTTGTTTAGAACAAAAAATGTGTATCTCTGTAAACGTGAATATAATCAGCACTACCATGATAattgacctttgtctgtgacctggagttaatctaatcagaggtgtgtccttaatcTGAGAGACCTCTGACCAATAGGGAAAGATTTAATTTGAGGAACCACCCAGGTGTAGGGAATAAATGTGGAATCCAGGGAAGGTCTCGgggcttcaatctgtgaccccgcaagggaagcattttgaagaccactgtttacagtgtattgttttgttatgtcgcatggctgctaactgtgacccgacaggggaagcatgttttgcagtctgctgctggcagtgttttatgttttatgattgattgtgt

Function

GO:

id name namespace
GO:0050877 nervous system process biological_process
GO:0050953 sensory perception of light stimulus biological_process
GO:0007600 sensory perception biological_process
GO:0007601 visual perception biological_process

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU85070 True 1306 lncRNA 0.38 1 20646192 20647497
TU85071 False 1259 lncRNA 0.37 1 20646239 20647497

Neighbor

gene id symbol gene type direction distance location
stpg2 NA coding upstream 94373 20499130 ~ 20551819 (+)
LOC120560324 NA coding upstream 245200 20397583 ~ 20400992 (+)
LOC120560540 NA coding upstream 250075 20394843 ~ 20396117 (+)
foxb2 foxb2 coding upstream 264701 20353242 ~ 20381491 (+)
LOC120560539 NA coding upstream 318289 20312561 ~ 20327903 (+)
si:ch73-72b7.1 unc5c,LOC102797243,LOC102309063,LOC102212007 coding downstream 202489 20849986 ~ 21049849 (+)
LOC120560913 gdnf,LOC103362940,LOC102209597,LOC101471543,LOC102304722,LOC106526208 coding downstream 630905 21278402 ~ 21282508 (+)
LOC120561163 lmbrd2 coding downstream 746276 21393773 ~ 21403390 (+)
golm1 golm1 coding downstream 756466 21403963 ~ 21410730 (+)
agtpbp1 agtpbp1 coding downstream 780846 21428343 ~ 21458347 (+)
G63465 NA non-coding upstream 2920 20642917 ~ 20643272 (+)
G63460 NA non-coding upstream 5090 20640758 ~ 20641102 (+)
G63457 NA non-coding upstream 8834 20635589 ~ 20637358 (+)
G63451 NA non-coding upstream 80050 20565668 ~ 20566142 (+)
LOC120560275 NA non-coding upstream 81747 20558340 ~ 20564445 (+)
G63471 NA non-coding downstream 13343 20660840 ~ 20661157 (+)
G63511 NA non-coding downstream 517319 21164816 ~ 21222651 (+)
G63545 nipbl,LOC104950412 non-coding downstream 665256 21312753 ~ 21314091 (+)
G63576 NA non-coding downstream 698870 21346367 ~ 21347517 (+)
G63627 NA non-coding downstream 832283 21479780 ~ 21484666 (+)
wdr31 wdr31,LOC102796061 other upstream 155606 20473651 ~ 20490586 (+)
vps13a vps13a other upstream 204099 20400947 ~ 20442093 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other upstream 882668 19759596 ~ 19763524 (+)
rasl10a rasl10a other upstream 1197242 19430401 ~ 19448950 (+)
tmem119a LOC103353570,LOC104946818 other upstream 1564538 19076561 ~ 19081654 (+)
G63480 rbm19 other downstream 28920 20676417 ~ 20677916 (+)
LOC120560787 NA other downstream 941379 21588876 ~ 21599289 (+)
G63905 NA other downstream 2282402 22929899 ~ 22930205 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other downstream 2840470 23487967 ~ 23562285 (+)
G64108 NA other downstream 3045165 23692662 ~ 23693291 (+)

Expression


Co-expression Network