G63576


Basic Information

Item Value
gene id G63576
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 21346367 ~ 21347517 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU85205
TTCAAgtcaaatcaattttatttaagCTAAATATCACAAATCATAAATCTGCCTCAAGGGCCATTACAATCTGTATAGTGTATGACACCCTCTGTCCTTTTTGACCCTTGATTCGGAAAAGGAAAAACTcccctcccccaaaaaaaacaaaaaaccaaaaaacattaCAGTAACAGGATAAAAGTAGAAGAAGCCTCAGGAAGAGCAAGTGAGGAGGACTCCCTCTCCCAGGACAGACGGACATACAGATGTCTGGTGTACAGAATAGACCAACTAAGTAAAACTATATTAAGTATACCATTAGGATGACAAAATTATAGATAGGATgtaaacatgaataatatggatcTGGGATGAGGAAACCTCAAATGAGGATTAAACAagtatttaaaacatttaaaaacatctaCTCATCAGCACTAGCTATTTTAAAGGCTAAGCTTACGACATAATGATAAATACacaactagtgtgtgtgtgtgtgtgtctgcagcagTCATATGTGAATTCATGAGAGAAACATTCATATCGAGAGAGACACACCAGCAACTGTAAACAAAGGAACTATTCCATTTCCTCAAATGTGTAAAGGAAAACCCTTTGGTCCTTTAAATCAGCCAGTTTTGCATTTGGAACTGGGAACTAGAGTGATTATTAGTTTTGTCATTACGGTTTGATAAGAGCATGGTCCCAACATCTTCACATACGTAACCCTCAAGTAAccttttacaatttaaatctACAATGAATGTACACATTTATCTACATTTATCTCTActgcacatgtacagtatattcagAACAATATTCTATACAAAGCAACTTCTATGCAAATGCAACATTTGTTATGGTATACAGAATTAGCTCAAATACAAGATAGCTAAATTAAAAGTTGGGGGATTAACTGAAATGTGTTACAACATGCATCCATATTAAATCAAGTGAAATAACATCAGATAGTATTATCTAAAGAAAGTTGAATTGAGAATAGACAATTTGAAAATTATATATCCAGCCTTATGACTGCCAATTTACTAagttgacataaaaaaaatatttcaaacaaataaTTTTTAGTTCTATGCCCATTTTAGAGGGATCGACTCACAATCAAAATATGAGTATTCCTATCCGAAATAAATCATTACTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85205 True 1151 lncRNA 0.33 1 21346367 21347517

Neighbor

gene id symbol gene type direction distance location
LOC120560913 gdnf,LOC103362940,LOC102209597,LOC101471543,LOC102304722,LOC106526208 coding upstream 63859 21278402 ~ 21282508 (+)
si:ch73-72b7.1 unc5c,LOC102797243,LOC102309063,LOC102212007 coding upstream 296518 20849986 ~ 21049849 (+)
stpg2 NA coding upstream 794548 20499130 ~ 20551819 (+)
LOC120560324 NA coding upstream 945375 20397583 ~ 20400992 (+)
LOC120560540 NA coding upstream 950250 20394843 ~ 20396117 (+)
LOC120561163 lmbrd2 coding downstream 46256 21393773 ~ 21403390 (+)
golm1 golm1 coding downstream 56446 21403963 ~ 21410730 (+)
agtpbp1 agtpbp1 coding downstream 80826 21428343 ~ 21458347 (+)
hnrnpk hnrnpk coding downstream 279495 21627012 ~ 21641536 (+)
c6h9orf64 LOC103366756,LOC102204152,LOC102298164 coding downstream 295380 21642897 ~ 21649576 (+)
G63545 nipbl,LOC104950412 non-coding upstream 32276 21312753 ~ 21314091 (+)
G63511 NA non-coding upstream 123716 21164816 ~ 21222651 (+)
G63471 NA non-coding upstream 685210 20660840 ~ 20661157 (+)
G63468 NA non-coding upstream 698870 20646192 ~ 20647497 (+)
G63465 NA non-coding upstream 703095 20642917 ~ 20643272 (+)
G63627 NA non-coding downstream 132263 21479780 ~ 21484666 (+)
G63628 NA non-coding downstream 139252 21486769 ~ 21487038 (+)
LOC120560273 NA non-coding downstream 261306 21608823 ~ 21620711 (+)
G63641 rmi1,LOC102777824,LOC104967280 non-coding downstream 268706 21616223 ~ 21618602 (+)
G63714 NA non-coding downstream 497315 21844832 ~ 21845138 (+)
G63480 rbm19 other upstream 668451 20676417 ~ 20677916 (+)
wdr31 wdr31,LOC102796061 other upstream 855781 20473651 ~ 20490586 (+)
vps13a vps13a other upstream 904274 20400947 ~ 20442093 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other upstream 1582843 19759596 ~ 19763524 (+)
rasl10a rasl10a other upstream 1897417 19430401 ~ 19448950 (+)
LOC120560787 NA other downstream 241359 21588876 ~ 21599289 (+)
G63905 NA other downstream 1582382 22929899 ~ 22930205 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other downstream 2140450 23487967 ~ 23562285 (+)
G64108 NA other downstream 2345145 23692662 ~ 23693291 (+)
prxl2c aaed1 other downstream 3473797 24821314 ~ 24823066 (+)

Expression


Co-expression Network