G63627


Basic Information

Item Value
gene id G63627
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 21479780 ~ 21484666 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU85260
GGGACCTTTGATGTGACATAACACTTTATTAATTACATTGTATCACGACAGACTGCGCCACCTTCAGAGAGAAATCATATGATCATCATCATTACCATCATGACTCACTGCGATCATTTCCATCACGCAACTGTATGACTGTACAGTTCTCtctggtgtgtgtttctgtgtgtgtgtgtgtgttcacccgCAGAGCACAAATGGATGGCATTGAAACCTTTGCTTTATACCCAACAACCTGATTGCAAAGACAGACATTGGCTGCTGAACATTTTAAGCATTTAATTACCTTGTGTGCTTTGCAATAAAGATGTTTCTTACATTTTGAGGATAATTTCTAggcattgaaaaaaaacattttaacttaAGCATCCACAAAACATCCAACATCCTCCTTTTTTTTGCTACCACGGTGGCAGCGGCGAAACCTTCTTAACACAAAGAAAAATGGCACAGAacagaaaaaatactgaaaaacaGAGATACTGCATATAGTAAATCAcagtttcatttttcttttttgcagtaGTTAAGCAGTTTTTGTGGTATTACAttcgaggagagagagagagagagagagagagagagagagagagagagagaacattttAGTCATAACTAAAGCAATAGAGTGATTCCATAAATCTTAGCTGCCATAAACCCAACTTCAGTCCTACAAGACTGGGCAAAGTCATTTATCATGAATTGGTGAACAGCAACAACAAGCCAATTCCTGATTCCTTCGTTGAATCTCATTGCATTTGAACTAGGATTCGGCTGGAGTCTGAACCCGGCCTACGGACCCCTCCTTACTCACTCTGGCATTAATCAgtcttctccacacacacacatgcacgcacacacacgaccGGGAGAATGAGCAAACAAATCTAGAGGCAGCTGTATGTCATTTTGTGTATTTGAGAGTCCCACGCATCTACCCAATTTCTCTGCCCTCCACTTCtaagacaaaaagaagaaaatatcaCAATCTACATACTGACACAGTCTCGGACACAGCAGTTAGCGACGCTTATTTCTTTCAGCAGCTTATTCACATTTGTACATGTATTTTGTTCATTCCTCTCGCTGTTAtttcattttacaaaaaaaagtagCACTTCTAGAGACCAAGTTTTAAGACTATCACGTACAGTATAGGCAGCATAGAAGAGGAAAGTTGGTTGAGTAGTCTATTTTACAGTAGGTCACTTgaagaagagggagaaagagagaagtcTGTGATTGTCAGTCCCTCCTTTTCTGAGGTGTCCATTCAaagcagttgtttttttctctttgtttgaccAATATCTTTGATCTGAGGCATTGATGCAAAGACAGCTGATCTTTAGCTGGAGTTACATGTAAAGGTTTACAGAGCGCACCTGCGTTGTGCTGACAAGTCCTCATCGTAACAAACCCCTCTCTCACAGCCTCTTCCTATAACTGTCAAAAAACATCACCATTGTTCAACTTGACACAGttcattctttaaaaacaaaaaggaaacacatcAGGTACACAGTGCAGCCAGCTGAGATGTTGCGTTGACGTACTCCACTCTTTTGACATCGTAGGCGTTTATATGCACCCTGTTTGTTTCTTGCACAGGCCCTCACACACCCTGCCCTCTGTTATTGCGCAGCGTTATTGTgtggcaagttttttttttttattgtttcgaGTGTGCTAACTCAGTGCAAACTCTACTTGACTATACAGCAGGGATGGATTTTGAGGACCTTGTTAGCCTGCCTTGTCAAGGCTGCAGCCATTAACCCCTCACACTCATGCTCTGACAGGTGACAGTAATTTTGCAAAGTGTCCAAATAAATCTACAACTGTGGCAGACAGGTGAAACATCCATCCCTGTTGTGGAGTATGCTGAACATGAGGACAGGCTAGGCAGCTGTTAAGGGGGAGCCTGACATAACAATACATATACACTCAAGATTATCTTACACAATAGCTAAAACATAGTTAATTAAACCAGTTATCAATTTTCACTTTGTTGTTGCAAAAGGCAACCTTAGATATAGAAAGAAATGTACAAAAGGCTCCTTAATTTATAAATTATACTataaatcaatcaaatcaacATTTTCAAGTTCACAAACATCATTACTATCAAGTGCTGCTATTAATGAACAAAAAGACTTAGAATTCCAGATTGATTGATGTTTTACAGCTCATTCAAATGGCTGTTAGTGAAACCTCAGTGATTGTGATTCTTGTCTTTAAAGAGTAAAATATGCCCcagtaaaatgcaaaaacaaacattaaatgtGTTTCCTTGCATGCATGTGAGCCGTTGTATATACAGAGGTGTCTGTAAGCATTTTGACCAGATACAGTATGTGAGCTGTACTGTAAGTGAGTGAAGTGGTTCTCAATAATGGGGATGTCTGGTGCATTAGAGTTCATTTTCAGTGTAAGCTGTTGGGGGATTGCCAGTaaaatgtgtgtgaagtgtgtttgcgtgtgcatGTGGTTTGAGGCCAGCCGGAGGAATGTGATGGGTAAAGTAAAAGTTGTGGCTTTACAGGACACCTGCAGGCCACAGTAATGATGGATGTTCACTTTCACTTTCTCCCTGAGGACATTCAcacctcctctcattcccccctctcccttccttttttactccactatcttctctttctccttcatcTTTCTCTACAGGACCCATTCATACCTTTTTAACTCCTCATCCTCTTCTCTTTTCTACTCCATTGCTTCCGTTCTAAATTTTCCTCTCCATTTCTTTCCCACTATGCATTATTACCTCTCCTCTTATTTCTCCTCTCCATTGCTCCTCATTCcagtcccccctccccccacctctctctatgttttcttctcctttacctctcctctccatccctccatctttcCTTCTCAGCCATAAAACAATAAGTCTTGAATGTCTGTGAGGAGACTGTGCTAATGGAGCCCATTAGGCTGTAATGAAATATACATTACACCATTACAGTGGACGGGGCCTGGCTAAAGCACTGCACCgctcaaataataaaacatgcaCAATTCAATTTCCTTCccgttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttacactgtGGTAGGTTACACTCTCTAGCACAGATGTGGTTTTTAAGGATGTCTAAGTGCTGAGAGCCTTGATGATTTAATATGGGTTGACCAATTGAACCACACCTTCTACAGCGCCGTCGCCCACACATCTGACCGTGATCTGACCACTCAGAACCCAGCCTCCCTTAGCAACttttacaccccccccccatcccctcaACACCAAGACCTCACGATTGtcagacagctgcagacaaattaATCAATTGACCTCCGACCGAGCGCTTGACATCACAAGTGAAGCATCTGTCACttcgggggaaaaaaaataaaatgtagtcaTCATCATGTTACCGTGTGCTGTATGACAGTGCAGTCCAGGCCTGAGCAAAGTAAATATGTAACAGAAAACAGTATGCGGATGTGAGTTCCTATATCCTCATAATCATGTATATCAGACTGTTGCATGAGGAGAGATTATAGATCAGTGCCAGATaaatcaaccttttttttttttttttacacttctaGAATTCACAATTACAGTATACTAGAATCCATTTGCCATTTCCCCCCACAGCAGTTCAGTTCAGCTTTAGTAGGCACTGTATTGTTAGTGatcgttttttttaagtgaaattGGCCAACCCAAAATAATCTTTGTCATCTCTCCTCTTAATTTCATCGGACAGGCAGAAAACCAGATTTTGTGTTTACTTTTCCAGGTTATTTTTCTGTTCCagtcaatatactgtatgtgtaccaGTGTGTTAATCATCAGTCATTTCCTCTGGCCATGTTGGATGAATACTGACATTAACACTCATGTACAGTTCTGAggaacatacagacacacagacagggtgAGAGGGGAAAACACAGTGTCTTTATGGCTCGACATAGCACAGAGCCATTTCCTCTGAAATGTCTTACCGTCGTACAGTCTCATATTTACACGCAAAAGGATAGAAGCTTCCGGAAATCCTCCCAACGCTGCGCCTCCTTGAAATTTCCGGATGTTCAAACAAGTCCTGTTGTCCGACAGTCAGCGAGGGATGAGTCATTCAATTTATAAATTTTAAAGTCCTGTTAATCCGGTTTTCATCAATTTAGCCCCGAGTCAGTTTGAAGCATTTGAAAAGAAGTgagaagctttttttcccccaaaagtTAAATTACTCTTAGCAAATGTCTTTCCGGGAAGGAAAGAGGGAAGGAGTAGAGATGCACAAAGGAGAGGAAATTGGCAGGGAGGAAAGACGCAGTTGGGGATAAGTTGAGGAATATTTTGATTGCCTTTTAAGAGTTTGATAATAGCTTCACATCCTGTACAGCACGACCACACTTCATTTATTTCACAGGTGTCACCGTGTGCACCctagcacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatgcgcaacctcaaatgcacatacacactaaGGTACAGTAATCATCtccacccaaacacacacacatcctcggGCCTCATCCTGTGTTCAGCCCAGTATATCCAGGTATACAGGTGAGGCTTTGGCCAGATTGAGGAGCAGACAGTGGATTTCTTTGATGTTGAGTCTCATGTGCGGCTCTCGCTGCCAGCAGCCCAGCATCAGGTCATATACTTCTTTTGGACAGGTCCTGGGGCGCTGCAGCACCCTGCCCTGGGTTATACACTCTATCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85260 True 4855 lncRNA 0.42 2 21479780 21484666

Neighbor

gene id symbol gene type direction distance location
agtpbp1 agtpbp1 coding upstream 21433 21428343 ~ 21458347 (+)
golm1 golm1 coding upstream 69050 21403963 ~ 21410730 (+)
LOC120561163 lmbrd2 coding upstream 76390 21393773 ~ 21403390 (+)
LOC120560913 gdnf,LOC103362940,LOC102209597,LOC101471543,LOC102304722,LOC106526208 coding upstream 197272 21278402 ~ 21282508 (+)
si:ch73-72b7.1 unc5c,LOC102797243,LOC102309063,LOC102212007 coding upstream 429931 20849986 ~ 21049849 (+)
hnrnpk hnrnpk coding downstream 142346 21627012 ~ 21641536 (+)
c6h9orf64 LOC103366756,LOC102204152,LOC102298164 coding downstream 158231 21642897 ~ 21649576 (+)
LOC120561417 kif27 coding downstream 165791 21650457 ~ 21660743 (+)
gkap1 gkap1,LOC102779162 coding downstream 177037 21661703 ~ 21672091 (+)
LOC120560432 NA coding downstream 187541 21672207 ~ 21679064 (+)
G63576 NA non-coding upstream 132263 21346367 ~ 21347517 (+)
G63545 nipbl,LOC104950412 non-coding upstream 165689 21312753 ~ 21314091 (+)
G63511 NA non-coding upstream 257129 21164816 ~ 21222651 (+)
G63471 NA non-coding upstream 818623 20660840 ~ 20661157 (+)
G63468 NA non-coding upstream 832283 20646192 ~ 20647497 (+)
G63628 NA non-coding downstream 2103 21486769 ~ 21487038 (+)
LOC120560273 NA non-coding downstream 124157 21608823 ~ 21620711 (+)
G63641 rmi1,LOC102777824,LOC104967280 non-coding downstream 131557 21616223 ~ 21618602 (+)
G63714 NA non-coding downstream 360166 21844832 ~ 21845138 (+)
G63715 NA non-coding downstream 390779 21875445 ~ 21875687 (+)
G63480 rbm19 other upstream 801864 20676417 ~ 20677916 (+)
wdr31 wdr31,LOC102796061 other upstream 989194 20473651 ~ 20490586 (+)
vps13a vps13a other upstream 1037687 20400947 ~ 20442093 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other upstream 1716256 19759596 ~ 19763524 (+)
rasl10a rasl10a other upstream 2030830 19430401 ~ 19448950 (+)
LOC120560787 NA other downstream 104210 21588876 ~ 21599289 (+)
G63905 NA other downstream 1445233 22929899 ~ 22930205 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other downstream 2003301 23487967 ~ 23562285 (+)
G64108 NA other downstream 2207996 23692662 ~ 23693291 (+)
prxl2c aaed1 other downstream 3336648 24821314 ~ 24823066 (+)

Expression


Co-expression Network