G64172


Basic Information

Item Value
gene id G64172
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 24015078 ~ 24017068 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU85948
TCTGCCTCTCAATATGAAAAAGTACAATAATGAAGGCTGGTGTTATGCTATTTATTCCTTGTCTCAATACAGTTTTACATTATAGTTTTATACATGCATAAATGtgtacttttacaatgtggtgaAGCAGTGACACTTGGTACAATACTAATTCACTGAAAAATATGAGGTTAAGTGTTAAGTGTTGAGGATTAATGTGTAAAGGAAGGTGAAGATATAAGGTCAATTCCTCCTCTTGCATCCTCAAGCAGCACAAGGCAAGATACTGACAACTGACACCTTTTGTCCCTTACATCGCTGTAGTCCTGCTTCACACTCGCTCATGGTCTGAGACGCTGCAGTCCCATCCTCCCCAACTTGAACGCATACATTTAATCCCGGGGTTAAGCAATCTGCAGAGTCCTTACAGCGACACTCGTTGGTTTGATCGTCACAGGTCTCCCACATGTGACAGTTGGTGCAGCCTGTTGTGTTGTGCTCTGGCCACTTGCAGGTGCTGTCCTCTGCTATTGTGTAGTTCTTTCCAATACACTGCAGTGCATGCATTTTGCACACATTCAGAAGGACTGATTTTCTATTCACGAAAGTAGTGGCACACACCTCCAAAGATGAACTGCATTCAAATGGCATTTTGCAAACACATTTTCCTCTGGAAGACTTCTCCCACGGTTTACATTGCACCGAAGGAGAGGGTTGTTGTGGTGTACTGACTGGGCTGCATTTGATTCCTGCTGGGTCTGGTGAAAAATGCAGACTGGGGTCACAAATAATTGTTGCTTCTCCAAGTAGCTGTCTACCCACTGGACAGGACAAGGTGACTGTGTCCCCTATGGCATAGGCCTGCTGTAAAGGTGAGGCTATGACGTCTTTAGTGAGGGACTTAATGTTGCACCTTGAGACTGGGAGAAAAGTGGGACTTTAACAAAGTAACAAATTTGTTTTGATTGTAAATGTTACACTTTGGTTATGGGTATTCACCTGTGCACAGTCCAGGGCTGGTAGACCAGGATTGATTAGCAGTGCATTCTAGGGTGCTCTCACCAACAAGATAATAACCGGCAGTGCAGGTATACTCAACCTTACTACCCACAAGGTAAATGTCCTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85948 True 1107 lncRNA 0.44 4 24015078 24017068

Neighbor

gene id symbol gene type direction distance location
rgs7bpa rgs7bp coding upstream 1594 24004082 ~ 24013484 (+)
si:dkey-250l23.4 rnf180,LOC104964874 coding upstream 14273 23992653 ~ 24000805 (+)
ipo11 ipo11,LOC102795548 coding upstream 108622 23754325 ~ 23906456 (+)
ercc6l2 ercc6l2,LOC105014104 coding upstream 292549 23704402 ~ 23722529 (+)
dock8 dock8 coding upstream 527572 23408216 ~ 23487506 (+)
c6h5orf51 clg12h5orf51,LOC104920657,LOC104943311,LOC103366194,LOC101465834 coding downstream 88922 24105990 ~ 24110189 (+)
fbxo4 fbxo4,LOC102798721 coding downstream 93252 24110320 ~ 24117183 (+)
ghra LOC103366197 coding downstream 109795 24126863 ~ 24162470 (+)
znf131 znf131,LOC102798529 coding downstream 157373 24174441 ~ 24181811 (+)
nim1ka nim1k coding downstream 164849 24181917 ~ 24202984 (+)
G64130 NA non-coding upstream 265243 23744939 ~ 23749835 (+)
G64127 NA non-coding upstream 279785 23734824 ~ 23735293 (+)
LOC120560908 NA non-coding upstream 571765 23431481 ~ 23443313 (+)
G64026 NA non-coding upstream 582605 23430690 ~ 23432473 (+)
G63976 smim15,LOC106580593,LOC103398561 non-coding upstream 733969 23274920 ~ 23281109 (+)
G64183 NA non-coding downstream 32900 24049968 ~ 24058761 (+)
G64188 NA non-coding downstream 84438 24101506 ~ 24104352 (+)
G64200 NA non-coding downstream 147609 24164677 ~ 24169528 (+)
G64235 NA non-coding downstream 217206 24234274 ~ 24234488 (+)
G64251 NA non-coding downstream 345407 24362475 ~ 24362909 (+)
G64108 NA other upstream 321787 23692662 ~ 23693291 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other upstream 452793 23487967 ~ 23562285 (+)
G63905 NA other upstream 1084873 22929899 ~ 22930205 (+)
LOC120560787 NA other upstream 2415789 21588876 ~ 21599289 (+)
G63480 rbm19 other upstream 3337162 20676417 ~ 20677916 (+)
prxl2c aaed1 other downstream 804246 24821314 ~ 24823066 (+)
cdc14b cdc14b,LOC102776968,LOC103141798,LOC106948523 other downstream 806650 24823718 ~ 24837448 (+)
LOC120561182 LOC104948667,LOC104930137,LOC103397628,LOC103366370,LOC107092578,LOC102226292,LOC106956829,LOC106919698,LOC103470079,LOC103141747 other downstream 1667896 25684964 ~ 25696576 (+)
LOC120560031 LOC104941040,LOC103357154,LOC102795853 other downstream 1897211 25914279 ~ 25915577 (+)
LOC120560359 NA other downstream 1909019 25926087 ~ 25928596 (+)

Expression


Co-expression Network