G64279


Basic Information

Item Value
gene id G64279
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 24860249 ~ 24862730 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU86081
AGGTATTAAAGATTCCATTCACACAACATGGTTAGTATAAACCACCcagtatatttttatattttattgagGTATTCTAATCTAAAAATCTAAAATGGATTTAAgtacaaaaacataaaagaaaaatgacCCTATTTAAAAAGATATACAAAAAAGTACATTACAAAGCTACTCTGTAACAGCAACTGGAGTAAACGTAAGTATGTGCTTTCAcctctttgtctctgttttttaAGAGGATCACTCACTTTGGAATGAAAcctaaaaaaatctaataaatgAGCTCATTGAAGCTTTCTGGAAGGTTTTACAGCCTTCTCTGTATGTAGCAGCTTGTCTTCATGGGATTAGTCATGACAGAAGAAGAAGCGGGTCAGAGTTTTAATCATCAGAGGACAAGACCAAACACGGAACATTTAAGTCCAATTTACTTTCATTTCTATAATGATCTGGAGTTCCATTTCCAAGGGTAAGTTACAGTATTTATAGAGCCCTCAGACATAAAGAGTTCTATCGTAGCCTAGTCTTTGAGGACTCTGGAGTCTCTTGCTCTCATTTGTCTTCTAGCGCTTGTAAAAAATAAGTTATGACAAAGaacaaatgtgaaaatgtacgtatttacCAAACACATTGAATTCAGTATTAACATGATATTCACAAGTGTCCTCTGATGGCGAGTGTTGGCCCAGATAATTGATCATAACTTTAGTGATTGGCAGTTGCCCCCCTCCCTCTGGTTGGTGGTTTGACTGCGTTTCTTAATATAGCCAGAAAACAATCAACACACTTTGACCTGCATCTCTCTGAAATTACTGAATATTATTTGCAAAGAGCAGCAAAACGTCTCTCTCTTCATAGTTTGACTATTGCTAGACAATCATCGCTGGTACATCTGGAGGCACAAATCACAGAGAAAAATATAATGTATCAAATCACATTTTACagagatttattttttgttttgtttacaatGATTCTATAAATGCAATGGTGGAAGTCATATTCACATTATTTACCacactataaaaaaataatactcccaTTATAAGTAAAACTCCAGTGTTTAAACTTTTACATAAGTagaagtacaaaagtattagcaacaaaatatacttaaagtattacaagtaaaagtactaacaaTGCAGAATGTCCCCATTCCATGTTGTTATTGGATCATTATTATTGATGTGTTATCATGTAAGCCATACTTTATTGTTGCACACAGTCAAAGTGGAGCTGATCTGAAACACTTTATTTAGCCTACAGTTTGGTCTATAACAACGCATccaattttataaaaatcaTATGTTAGGAAGGTAAAATCTTAACCTAAAAAAGTAGCTGTTTAATAaatgtggagtaaaaagtacaatatttccctctaaaATCTTGTCGGACAGAATTAAAGAgtataaaatagaaatactaAAGTACGAGTACCTCTctcaataaaaagaaaaaaaccatAAGGACTGACACAAGCTCTTGAAACACCAACTGTGAAAACACAAATTTCGTGAAATTTTCTTTCCTCATCTCAGTAAGCTGCTTTCAGCTTGTTCTTTTTGATCAGCCACTGCAGCACCATCAGTGTTCTCTTCACTTTAGGATGAGCACATATGGGCTTCTTCATCTCCTTTACATACAGTATCAATGCAGGGATGTCACAGGCGCCGCTGCTTGTCTGCATGTTCCAGCTGTGAACCTTCAGCAGCAGTCCCACAGGGATGTCCGTTGCTGTTGCGACGCAGCATTTTGGGATGCCAGCTTCAGTAGAGGTGATGGCCAAAGTACACAGACAGGCAATCACAAACGCAACTTTCACATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86081 True 1832 lncRNA 0.36 3 24860249 24862730

Neighbor

gene id symbol gene type direction distance location
znf367 znf367,LOC102779640 coding upstream 10894 24843706 ~ 24849355 (+)
gadd45ga gadd45g coding upstream 645160 24213241 ~ 24215089 (+)
creb3l3l LOC103366202,LOC104958765 coding upstream 649807 24203522 ~ 24210442 (+)
nim1ka nim1k coding upstream 657265 24181917 ~ 24202984 (+)
znf131 znf131,LOC102798529 coding upstream 678438 24174441 ~ 24181811 (+)
smyd1b smyd1,LOC107394125,LOC100708974 coding downstream 32332 24895062 ~ 24901099 (+)
znf366 znf366 coding downstream 61799 24924529 ~ 24932594 (+)
mrps27 mrps27,LOC106943511 coding downstream 72930 24935660 ~ 24948527 (+)
ptger4a LOC103360740,LOC104967800 coding downstream 95432 24958162 ~ 24962478 (+)
loxhd1b LOC108233688,LOC105931393,LOC106513687,LOC106924721 coding downstream 111606 24974336 ~ 25000464 (+)
LOC120560123 NA non-coding upstream 341376 24514819 ~ 24518873 (+)
G64251 NA non-coding upstream 497340 24362475 ~ 24362909 (+)
G64235 NA non-coding upstream 625761 24234274 ~ 24234488 (+)
G64200 NA non-coding upstream 690721 24164677 ~ 24169528 (+)
G64188 NA non-coding upstream 755897 24101506 ~ 24104352 (+)
G64287 NA non-coding downstream 13832 24876562 ~ 24892517 (+)
LOC120560056 NA non-coding downstream 171979 25034709 ~ 25040898 (+)
G64392 NA non-coding downstream 347194 25209924 ~ 25210170 (+)
G64450 NA non-coding downstream 396986 25259716 ~ 25302920 (+)
G64489 NA non-coding downstream 643434 25506164 ~ 25506568 (+)
cdc14b cdc14b,LOC102776968,LOC103141798,LOC106948523 other upstream 22801 24823718 ~ 24837448 (+)
prxl2c aaed1 other upstream 37183 24821314 ~ 24823066 (+)
G64108 NA other upstream 1166958 23692662 ~ 23693291 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other upstream 1297964 23487967 ~ 23562285 (+)
G63905 NA other upstream 1930044 22929899 ~ 22930205 (+)
LOC120561182 LOC104948667,LOC104930137,LOC103397628,LOC103366370,LOC107092578,LOC102226292,LOC106956829,LOC106919698,LOC103470079,LOC103141747 other downstream 822234 25684964 ~ 25696576 (+)
LOC120560031 LOC104941040,LOC103357154,LOC102795853 other downstream 1051549 25914279 ~ 25915577 (+)
LOC120560359 NA other downstream 1063357 25926087 ~ 25928596 (+)
nsd3 whsc1l1 other downstream 1496390 26359120 ~ 26383843 (+)
G64814 cldn5,LOC103357131 other downstream 1550139 26412869 ~ 26414597 (+)

Expression


Co-expression Network