G64450


Basic Information

Item Value
gene id G64450
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 25259716 ~ 25302920 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU86313
gtccaattttggtgagctcgtgcaaattgtggcctcattttcctatttttagtggagatgaccggtggggtcttctgctggtgtagttCATCTGCCTCAATTTTTGAATCAGTCCAACTTTGATAAACATCAATGATTTAGTTTGCTCGAATGGAAACAATTGAAATGTTACTTTAATGCTTACTACTATGGACCATAATTGTTGCAATCAAATGATTCGCCTGCTCATGTTCCATAATTTCTTTATTACATAGGTACATTTTCTGTAAACAATACATTGATTTACACATCATCTTCATTATAAAATTAGAATTATCTGATCAAATTCACATTTGCAAGattgaggaggaaaaaaaagaatgtgatATTTGATTTAGCCGAGTAAGTTTGTTTAATGTTCTCCTGCAACACTGATGGAGTAAAACTCATCTGTTGGTGATGCAagtcttcaaaataaaataagcagtattttggggaaaaaaagcactctttgttaaaattgattttattctccagtttctGTAGGAGTACACAGTTTGGCTTTGATAAAACATTTCATCTCCAGTTGCTGCAGGAGTACACATTCATTTCCAACCATTTTGATTTGTGGGGGAAACAAATCGCAGGCATTCAAGCCCACATCAGGAATaagagaaaaaagcagaaaataacATCTCCCTTCATCACTCAGTCTATAATCCTAAATATGaacatatttcataaatatacctgTGTACAGAATGATATTCTTCATAAAGTGGCTTCTGTCATATCTATGATTAGTTCTTATGATTATGCAGTCCTAATGAGAAGCCTAGTTTATGGATCTATGTATATACATAACTGCAATAAATCAGCTTCATCTAAAAGGTTTTCTTCAGTTTATCCTCCCTGAAATCAAAGTTAATGTACATTTGTTTCCCTACAGCAGCCCAACAAGGTTCTATGGCTAGATAGCTTAATGGATTAAACTCCTTCAGACTAAACAGCTATAGGACAGTTTGCATGAACCCCTTCCTTATTTATGTTGAAGAAGCATCATATTACACACCAACCTAACCTACATTTTCCAAGCATGTACTGAAGGCAATTTGCTGCATTTGGATGATATATAAAGCAACCGAAtaacaaaaaagtgaaattaaGGTCATTCCTAGACAAAGGAACTGAATAGCAAGCCAGAGAAAGCAGGACCGCTAATAAAATGATGATTACTACAAGGCAAACAATATTGTTTCCAAGGCGGTTTTAACTCAGGGTCCTTATTGGAAAATGAAAGTTTGAAAGTCGATAAAAGGGAAGTGCATTGTTATTGGAATAAAACATTTCCACAACAAAATTCTATATTCACTAAAACTTAACTGCCCCACCCAAACCCCTTTCCATAGTCAATGGCAACGTTTCTGGCTACATGTTCTTAAGcttaatatttgaacatttaaaagaaaacggCCAGAAATGGTATTATTCATGGTGTCCCATACCAACGAGGGCCTTGTTAAATGAAAGCTacataatatcaataataatcaATATTATCAGTCCTGTGCCAGCATGGTAGAAGTAGTTTTCAGAGAGATTAAGgacacttaataataataataataataataatacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86313 True 1618 lncRNA 0.34 2 25259716 25302920

Neighbor

gene id symbol gene type direction distance location
hsd17b4 hsd17b4 coding upstream 547 25233215 ~ 25259169 (+)
atxn2 atxn2 coding upstream 119928 25107957 ~ 25139788 (+)
ostf1 ostf1 coding upstream 171070 25080307 ~ 25088646 (+)
LOC120560335 LOC104920830,LOC101074081,LOC103362722,LOC101475228,LOC102784348,LOC101160076 coding upstream 236028 25019069 ~ 25023688 (+)
loxhd1b LOC108233688,LOC105931393,LOC106513687,LOC106924721 coding upstream 259252 24974336 ~ 25000464 (+)
sema6a sema6a,LOC102790561 coding downstream 33104 25336024 ~ 25445140 (+)
cdo1 cdo1,LOC102791980 coding downstream 264784 25567704 ~ 25573107 (+)
LOC120560598 NA coding downstream 298236 25601156 ~ 25622051 (+)
spef2 LOC104950669 coding downstream 323084 25626004 ~ 25646477 (+)
LOC120560771 ugt3a2,LOC108233592 coding downstream 344195 25647115 ~ 25653156 (+)
G64392 NA non-coding upstream 49546 25209924 ~ 25210170 (+)
LOC120560056 NA non-coding upstream 218818 25034709 ~ 25040898 (+)
G64287 NA non-coding upstream 367199 24876562 ~ 24892517 (+)
G64279 NA non-coding upstream 396986 24860249 ~ 24862730 (+)
LOC120560123 NA non-coding upstream 740843 24514819 ~ 24518873 (+)
G64489 NA non-coding downstream 203244 25506164 ~ 25506568 (+)
LOC120560635 NA non-coding downstream 245103 25548023 ~ 25552264 (+)
G64495 NA non-coding downstream 250019 25552939 ~ 25555781 (+)
G64578 NA non-coding downstream 360107 25663027 ~ 25663385 (+)
G64592 NA non-coding downstream 394143 25697063 ~ 25699784 (+)
cdc14b cdc14b,LOC102776968,LOC103141798,LOC106948523 other upstream 422268 24823718 ~ 24837448 (+)
prxl2c aaed1 other upstream 436650 24821314 ~ 24823066 (+)
G64108 NA other upstream 1566425 23692662 ~ 23693291 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other upstream 1697431 23487967 ~ 23562285 (+)
G63905 NA other upstream 2329511 22929899 ~ 22930205 (+)
LOC120561182 LOC104948667,LOC104930137,LOC103397628,LOC103366370,LOC107092578,LOC102226292,LOC106956829,LOC106919698,LOC103470079,LOC103141747 other downstream 382044 25684964 ~ 25696576 (+)
LOC120560031 LOC104941040,LOC103357154,LOC102795853 other downstream 611359 25914279 ~ 25915577 (+)
LOC120560359 NA other downstream 623167 25926087 ~ 25928596 (+)
nsd3 whsc1l1 other downstream 1056200 26359120 ~ 26383843 (+)
G64814 cldn5,LOC103357131 other downstream 1109949 26412869 ~ 26414597 (+)

Expression


Co-expression Network