LOC120561182 (LOC104948667,LOC104930137,LOC103397628,LOC103366370,LOC107092578,LOC102226292,LOC106956829,LOC106919698,LOC103470079,LOC103141747)


Basic Information

Item Value
gene id LOC120561182
gene name LOC104948667,LOC104930137,LOC103397628,LOC103366370,LOC107092578,LOC102226292,LOC106956829,LOC106919698,LOC103470079,LOC103141747
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 25684964 ~ 25696576 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU86491
TGAAGAAAGGAGACTCAAGTGAATGAGCGTTTGGGCTGCACCGGGAAGAGAACCAGCGTTTCAAAACAAAGGACAGGGACAGCTTCTTCACCTTTGCGCCTGCAAAATCTCTCCACGTTGACTTCCCGCCTGTTGCTGATGGTGGGCCTCATGCTGTACCCTGCCGGTTGGGGTTCAGAGAAGGTGATCAGCTACTGTGGCGCTGAGACCTTGCCCTTTAGGCCGGCTCTGTGTTCACTCGGCTGGGCGTTCTACGCAGCGATAGGAGGAACTTTGGGATCCTTTCTGTGTGCCGTTTTGTCTGCACAGGCTGAGATTGCCACCTCCAGCGATAAGGTTCAGGAGGAGATTGAAGAGGGAAAGAGTCTGATCTGCCTGCTCTGAGCCTTCAGAAACGTTGGGAAACTCCAGGAAATCATCCTTGATGTAATGTCTCTGATATGGCCACTTATAGATCTCAGTGGAGGGAGGACAGACATTGTGTTGAGTGATTTTCTTCATAAAAATAATCAGCTGGTTGTTAAGAAGATAGAAGCCTCGGTAACCACTTTCTAAATCGTAAGGCATGGTGTTCATGCCTAAATGATGATTGATAAAACTGCCAAAAAGGCTACAGCAGCATTACATGTAGTCTTAACCAATGTTTTTGACCAAGATacagtttatttttgtaaaatatatttcCTTAAACAAACCACTGTACTGTAAAAGCAGGAGATTAGTTAAAGAAATTGGTAGTGGATGTGTTGTTAGCGTTATTGTAGACAGGTTAAACACTGCCAGTCAAacagtgtgtatgtttgtaacGTCATTATAATGTTCCTTCACATGGTTCACCTGCAAACCTCAACAAACCACTGAACacaagcaggtgtgtgtgtgtgtgtgtcacacaaaCTGTTGAGGTTCTCTAAATGTCCATGTGCTCTGATTGTATGGCACAGCAGGACAGCACGACTCTCTAGCTAACTTTACATGTGCCACTTAAGGGATAGTTCACTTTAAAGGGAGTTTCCCCTGTTAGATTGTGTGTGGGTCTCTTGCAGCTTATTAACTAGCGGAGTGTGTGAACAGAGCTGAAAAGGAACAGAGATTTGCCATATGTTTCACTGGTCCGAACTTTGAGGGGATGTTTGCTCACAGCCAGATAAAGCAGGCTGCACCAGAGCTTTTCATGGGTTACCTGACACACCATAAAGACACAATCTGGCTTTGTAAAGATATCCAAGACACAAACGAGTTGATTAAAAATTCAAAAGGTGTCTGTGGAGTCTTTGCTAGATGAAATGGGTAATTAGTGTGACCATTTATTAAGAGAGAcctctttgtttgtttggtaCTTTTGAAAATAACCTGATGTTGTCTTTTGCACTTTGTCCTTAATTCATTTCACATTGCTTCATATTCTGTTCACGTGTTTTCATTTTCCCAACCATGCTTCATTAAGTTGCAGTAAATGTAACATCATGGGATTGCTTTTATTCATTGTAGATGAGATGTGCAATAATTCAACTATAGTGTTTTTGCTGTGAGAGTGAGTGgacagagaggatgagacatttctaaactGTCTGTGCTTAAATTAATATGTTGACTGTCtgctgtttttgttacattaacAAAAGAGTAACAGCATCCGTGGCACATTGTATGATACTGCATGTGTGAGAGGTTAAGTGTTAGGAGAGATTGTCTCTGTATTTTGTACTCAAATAAACCAGGCCTTTTTTATTAATTCT
>XM_039804178.1
TAACGTCCTGAAGAAAGGAGACTCAAGTGAATGAGCGTTTGGGCTGCACCGGGAAGAGAACCAGCGTTTCAAAACAAAGGACAGGGACAGCTTCTTCACCTTTGCGCCTGCAAAATCTCTCCACGTTGACTTCCCgTGTGCTTTTCAGATGGTACCATGGCTGAGGGAAGCTGCTTCGGTGCATTGTAGCTGTTAGGGAtgaccagagaagaagaagagggaaaaGCAAAGAAGAAAGTATTGTGAGAGAAGGGAAAACATCTGCTCAGAGAGGATAAGATCAGAACAGGGAATCTACTGGACCTTTCTCTTTGTAAGGAAAGGAATTTAAACTCTCCAGTATCAGTGCTCTGTCCCTTTTGAAGggctttatattttttatttaattttttatttgtattggtTGTTACCTTCTAAGAAAGAGTTAACACCATGTGCCATGTTATTGTAACATGCCGCTCCATGCTCTGGACACTACTCAGTATTGTAGTGGCCTTTGCTGAGCTCATTGCCTTCATGAGCCCTGATTGGCTTCTGGGATTCCCCCGGTCGGACTCCAGTGCGAGCGGGGCGGGAGTGGACTCCGGGGAGTACCGGCCGTCTCTCGGCCTCTACAGCCGCTGCCTTCGTGTCGGGGCCCGGGGAGTAGGGGTGAGCTGCGGGCCCTACGCTGGGACATTTGGAGAAGTGGCCAGTGGCTTCTGGCAGGCTGCCATGTTGTTTCTGGCAGCAGGGGTGTTAGTGCTAGGAGGAGTAGCCTGTATCTCCATCTTCAGCCTGTGCTTCCAGAGCATCCTGAAGAAGAGCATATTCAACATCTGTGGACTGCTCCAGGCTATCGCAGGCCTGTTGCTGATGGTGGGCCTCATGCTGTACCCTGCCGGTTGGGGTTCAGAGAAGGTGATCAGCTACTGTGGCGCTGAGACCTTGCCCTTTAGGCCGGCTCTGTGTTCACTCGGCTGGGCGTTCTACGCAGCGATAGGAGGAACTTTGGGATCCTTTCTGTGTGCCGTTTTGTCTGCACAGGCTGAGATTGCCACCTCCAGCGATAAGGTTCAGGAGGAGATTGAAGAGGGAAAGAGTCTGATCTGCCTGCTCTGAGCCTTCAGAAACGTTGGGAAACTCCAGGAAATCATCCTTGATGTAATGTCTCTGATATGGCCACTTATAGATCTCAGTGGAGGGAGGACAGACATTGTGTTGAGTGATTTTCTTCATAAAAATAATCAGCTGGTTGTTAAGAAGATAGAAGCCTCGGTAACCACTTTCTAAATCGTAAGGCATGGTGTTCATGCCTAAATGATGATTGATAAAACTGCCAAAAAGGCTACAGCAGCATTACATGTAGTCTTAACCAATGTTTTTGACCAAGATacagtttatttttgtaaaatatatttcCTTAAACAAACCACTGTACTGTAAAAGCAGGAGATTAGTTAAAGAAATTGGTAGTGGATGTGTTGTTAGCGTTATTGTAGACAGGTTAAACACTGCCAGTCAAacagtgtgtatgtttgtaacGTCATTATAATGTTCCTTCACATGGTTCACCTGCAAACCTCAACAAACCACTGAACacaagcaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcacacaaaCTGTTGAGGTTCTCTAAATGTCCATGTGCTCTGATTGTATGGCACAGCAGGACAGCACGACTCTCTAGCTAACTTTACATGTGCCACTTAAGGGATAGTTCACTTTAAAGGGAGTTTCCCCTGTTAGATTGTGTGTGGGTCTCTTGCAGCTTATTAACTAGCGGAGTGTGTGAACAGAGCTGAAAAGGAACAGAGATTTGCCATATGTTTCACTGGTCCGAACTTTGAGGGGATGTTTGCTCACAGCCAGATAAAGCAGGCTGCACCAGAGCTTTTCATGGGTTACCTGACACACCATAAAGACACAATCTGGCTTTGTAAAGATATCCAAGACACAAACGAGTTGATTAAAAATTCAAAAGGTGTCTGTGGAGTCTTTGCTAGATGAAATGGGTAATTAGTGTGACCATTTATTAAGAGAGAcctctttgtttgtttggtaCTTTTGAAAATAACCTGATGTTGTCTTTTGCACTTTGTCCTTAATTCATTTCACATTGCTTCATATTCTGTTCACGTGTTTTCATTTTCCCAACCATGCTTCATTAAGTTGCAGTAAATGTAACATCATGGGATTGCTTTTATTCATTGTAGATGAGATGTGCAATAATTCAACTATAGTGTTTTTGCTGTGAGAGTGAGTGgacagagaggatgagacatttctaaactGTCTGTGCTTAAATTAATATGTTGACTGTCtgctgtttttgttacattaacAAAAGAGTAACAGCATCCGTGGCACATTGTATGATACTGCATGTGTGAGAGGTTAAGTGTTAGGAGAGATTGTCTCTGTATTTTGTACTCAAATAAACCAGGCCTTTTTTATTAATTCTATCGGT

Function

NR:

description
PREDICTED: lipoma HMGIC fusion partner-like 2 protein

GO: NA

KEGG:

id description
K23893 LHFPL; LHFPL tetraspan subfamily member protein

RNA

RNA id representative length rna type GC content exon number start site end site
TU86491 False 1739 TUCP 0.42 3 25684972 25696570
XM_039804178.1 True 2618 mRNA 0.45 3 25684964 25696576

Neighbor

gene id symbol gene type direction distance location
LOC120560772 pdxp,LOC102792570 coding upstream 25503 25655685 ~ 25659461 (+)
LOC120560771 ugt3a2,LOC108233592 coding upstream 31808 25647115 ~ 25653156 (+)
spef2 LOC104950669 coding upstream 38487 25626004 ~ 25646477 (+)
LOC120560598 NA coding upstream 62913 25601156 ~ 25622051 (+)
cdo1 cdo1,LOC102791980 coding upstream 111857 25567704 ~ 25573107 (+)
LOC120560092 LOC101464110,LOC102227132,LOC106956827,LOC106513657,LOC105931341,LOC103374419,LOC101075487 coding downstream 60512 25757088 ~ 25762906 (+)
LOC120559963 LOC100704176,LOC102304428,LOC102794704,LOC102195896,LOC101487439 coding downstream 77802 25774378 ~ 25784037 (+)
LOC120560362 izumo1 coding downstream 243200 25939776 ~ 25949337 (+)
dusp2 dusp2,LOC106948589,LOC103145864,LOC102224120,LOC103470063 coding downstream 252878 25949454 ~ 25952579 (+)
adra2b LOC104943288,LOC102796455,LOC102308546,LOC103357149,LOC102212827,LOC100694621,LOC101484392,LOC105931407 coding downstream 262223 25958799 ~ 25964487 (+)
G64578 NA non-coding upstream 21579 25663027 ~ 25663385 (+)
G64495 NA non-coding upstream 129183 25552939 ~ 25555781 (+)
LOC120560635 NA non-coding upstream 132700 25548023 ~ 25552264 (+)
G64489 NA non-coding upstream 178396 25506164 ~ 25506568 (+)
G64450 NA non-coding upstream 382044 25259716 ~ 25302920 (+)
G64592 NA non-coding downstream 487 25697063 ~ 25699784 (+)
LOC120560927 NA non-coding downstream 17334 25713910 ~ 25747889 (+)
G64607 NA non-coding downstream 91881 25788457 ~ 25795441 (+)
LOC120560032 NA non-coding downstream 142560 25839136 ~ 25843093 (+)
G64643 NA non-coding downstream 219368 25915944 ~ 25916892 (+)
cdc14b cdc14b,LOC102776968,LOC103141798,LOC106948523 other upstream 847516 24823718 ~ 24837448 (+)
prxl2c aaed1 other upstream 861898 24821314 ~ 24823066 (+)
G64108 NA other upstream 1991673 23692662 ~ 23693291 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other upstream 2122679 23487967 ~ 23562285 (+)
G63905 NA other upstream 2754759 22929899 ~ 22930205 (+)
LOC120560031 LOC104941040,LOC103357154,LOC102795853 other downstream 217703 25914279 ~ 25915577 (+)
LOC120560359 NA other downstream 229511 25926087 ~ 25928596 (+)
nsd3 whsc1l1 other downstream 662544 26359120 ~ 26383843 (+)
G64814 cldn5,LOC103357131 other downstream 716293 26412869 ~ 26414597 (+)
c6h22orf39 clg12h22orf39 other downstream 797708 26494284 ~ 26496987 (+)

Expression


Co-expression Network