G64643


Basic Information

Item Value
gene id G64643
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 25915944 ~ 25916892 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU86551
aattttgacctgatgattgTGCTTGATCAAAAGTCAAGGAATTCActgggattcatcctctggggaccatgaatatctGTGTCAAATTGTATCCCAATGTATCGAGTAGATGTCAATATATTTCACCAGAGAAGGGAATACGTTTGTGGCGCTAGGGGAAAAGTCAAGGGATTGTTTTAAGTAATTCAGATTCAtcatctggggaccatgaatctCCTCTTTTGAAACCTCTCCAATATTCACTGGATAATGTCATTCTGCATCATTTTCAACTTAAACTATTATTTTATAAGATCACGCTTTTTACATACCAccaaacatactgtactgtatgtggacaTGGTCATCATTCACTGCAACATgtattttaagaaaaagaaTGAAATCCACACGGTGTCGTTTTGCATCTCTGAGGGAGCAGAGTTGCAGAAAAAGACCAGAAGGCAATTAATGGGGTATATTGTCTTCTGCAGCAGCAAATAAATGCTGGAAAACAATCCCATGAGTCTTCCTGTAACAAAGTACTGTCACTTTCTACTGTGAAAAAttaccaataaaggcttcttaaCCAACTGGACATGTTCCAGCAAGAAAGTAatctgaaattggggagaaattaacaacaTCGGCAGCCAAGATTACAACAGCAACGACGTTACTGtttaaattgtatgtacaaTGCTACATGTAGCTAGATGCTAACGTCACATGAGTTATCTTGGTTGCTGATGTTAtgaatttctccccaattttaGATTACATTCCTATTGGAAAAATTTGCGGTTGTGTAGTTTTTGGCTTAAAATCCTTTATTGATgattgtttttacagtgtaaagTGTTACATTCATTCCCCAGCTGCAATGGTGGCCAGTAGTGTCACGTTATTGCAGGGTTCAAATCTGTTCAATCGTGTTAAAGCCAAAGTGTTGTGCCTGTGCAGTAtgccc

Function

GO: NA

KEGG:

id description
ko04670 Leukocyte transendothelial migration
ko04380 Osteoclast differentiation

RNA

RNA id representative length rna type GC content exon number start site end site
TU86551 True 949 lncRNA 0.38 1 25915944 25916892

Neighbor

gene id symbol gene type direction distance location
LOC120559963 LOC100704176,LOC102304428,LOC102794704,LOC102195896,LOC101487439 coding upstream 131907 25774378 ~ 25784037 (+)
LOC120560092 LOC101464110,LOC102227132,LOC106956827,LOC106513657,LOC105931341,LOC103374419,LOC101075487 coding upstream 153038 25757088 ~ 25762906 (+)
LOC120560772 pdxp,LOC102792570 coding upstream 256483 25655685 ~ 25659461 (+)
LOC120560771 ugt3a2,LOC108233592 coding upstream 262788 25647115 ~ 25653156 (+)
spef2 LOC104950669 coding upstream 269467 25626004 ~ 25646477 (+)
LOC120560362 izumo1 coding downstream 22884 25939776 ~ 25949337 (+)
dusp2 dusp2,LOC106948589,LOC103145864,LOC102224120,LOC103470063 coding downstream 32562 25949454 ~ 25952579 (+)
adra2b LOC104943288,LOC102796455,LOC102308546,LOC103357149,LOC102212827,LOC100694621,LOC101484392,LOC105931407 coding downstream 41907 25958799 ~ 25964487 (+)
gpat2 LOC101483931,LOC102796756,LOC102305881,LOC102195621 coding downstream 64016 25980908 ~ 26161608 (+)
zgc:152830 LOC103357146 coding downstream 257332 26174224 ~ 26180116 (+)
LOC120560032 NA non-coding upstream 72851 25839136 ~ 25843093 (+)
G64607 NA non-coding upstream 120503 25788457 ~ 25795441 (+)
LOC120560927 NA non-coding upstream 168055 25713910 ~ 25747889 (+)
G64592 NA non-coding upstream 216160 25697063 ~ 25699784 (+)
G64578 NA non-coding upstream 252559 25663027 ~ 25663385 (+)
G64657 NA non-coding downstream 295 25917187 ~ 25917476 (+)
G64658 NA non-coding downstream 873 25917765 ~ 25918093 (+)
G64663 NA non-coding downstream 5271 25922163 ~ 25922388 (+)
G64677 NA non-coding downstream 12032 25928924 ~ 25929158 (+)
G64764 NA non-coding downstream 386958 26303850 ~ 26321956 (+)
LOC120560031 LOC104941040,LOC103357154,LOC102795853 other upstream 367 25914279 ~ 25915577 (+)
LOC120561182 LOC104948667,LOC104930137,LOC103397628,LOC103366370,LOC107092578,LOC102226292,LOC106956829,LOC106919698,LOC103470079,LOC103141747 other upstream 219368 25684964 ~ 25696576 (+)
cdc14b cdc14b,LOC102776968,LOC103141798,LOC106948523 other upstream 1078496 24823718 ~ 24837448 (+)
prxl2c aaed1 other upstream 1092878 24821314 ~ 24823066 (+)
G64108 NA other upstream 2222653 23692662 ~ 23693291 (+)
LOC120560359 NA other downstream 9195 25926087 ~ 25928596 (+)
nsd3 whsc1l1 other downstream 442228 26359120 ~ 26383843 (+)
G64814 cldn5,LOC103357131 other downstream 495977 26412869 ~ 26414597 (+)
c6h22orf39 clg12h22orf39 other downstream 577392 26494284 ~ 26496987 (+)
cltcl1 LOC100691387,LOC103359525 other downstream 697345 26614237 ~ 26644167 (+)

Expression


Co-expression Network