G65084 (lipg)


Basic Information

Item Value
gene id G65084
gene name lipg
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 27205234 ~ 27370959 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU87117
caacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaatactgcaTCTAGGAGAAATTCATTCAAAATATGCTTCATTATGGGATGTGCTCTGATAAATAACGTTGGTCTTGCAGTGCTTCCATTTTtctcataaataaaatatttaaaaatgtacagtacagcgACTACAACTGCTGGTGTATGTCCACTGGCACAGATCTGTATTCTACGTCACTAGTCCACACAAAGGAGCGTTCAACTCCTCGGGCAATCTTAATCATTTAGGACGCCTTTAGCCTGCGCGTCACTTTCCAGCAGTAAAGTATACACTGGACAGACCCGTGAGTCTGATTCCCCAGAAAAAAGGGGAAACCTTCCAGGTGCAGTTTAGAATCCAGTCGAGCCCCTCCCATCGTGCGCTGATCAATCTTCCTCCTACAAAAAGTGCTCAAATAAAGACAAGGCAGTGCTTCTAGCTGATCCATGTTGGGCCCACTGTGGTAATGGTCCATTGGTTGTTGGAAGTGTCACGTTGTTACATGAGCACCGTTTTCTTGGTTTCACTTCCCAGCCATCCCGACATTTTGCGAAAATTACAGCCTCCCCTGGTGAAATTTCAGTTTTTGCAGGATCTTGTGCACAGAATGTAAACCTTTTGAGTTTCCCCAGCTTTCACACGAATCCGCCGGACTTCCAGTACGGGTTTGGGAGGCTTTGCGTTCCAGGCCCAGAACGTCTTCTTAATGTTCTTCCAGACGGAATTCCAGGATTCAGATTCTCCTTCCCAGCTCAGACGGATCTTTAGCAGGTCACCAATATCCTTCTCAGTAAATACCAAGAAGGTGTTGGTCAGGTTCAGGCCAATAGTCTCATCGTGGCTGCACAAAAGGGGTGGAGAAATCGAGATGAGTCAGGTGCCCAGAAGTTCTAACAACTGTGTTCAATCCACCCATTTTGATTCTGCATTAATCAAAACAAATGTAGTGATTTACTAAAGCTGACATATGTTGAAGACTGAGCTGCTGTGATGCCATGTTGTGCTTTTATTTCCAAGGTGGTGACAAAGAATTGAAATCAGCACGAACTGAAAGGGACTGGAGTtcctcctccagtctgagcttgTTGTACATTACAAACCTACATGTCTGGCACTTTGAAAAGGTCAGTAAATACCAGGGTCAAGTTCCAAATTTATGTCACCGCAGTCACTGCACTTCTAAATATTACAGGCAGTGTAGTCAAGCCAGCGCACGGTGGTTTTATTATTTGTCATCCGATTTTGTACTTACACGTCGACAAATATGTTTGCTGTATCATTATGGGCTCCGTACAACTTGACATGGAAGGTGGGATCTGCATTGTCTGCTTGTTTTCTGTTGAATACGTGCATTTTCATCTGGTAGTGgtagc
>TU87119
ACAGTTAAATTGACAAGCAACGGCTTCTACAaattaatgatttatttttccAAGGTTATTTACATTATGTACACCAACACATCCCCAAAATACACTACATACAGTAACACTATGCACAAAATCTCAGAAAGATTGTGTGCAATGAAAGCAGGTATCTTCATCAGTTATACAGTGTATCAGTAATCTCTCAGCACAAGGCACACTTCTTGGTcacacacacacacacacacacacacacacacacagacacagacacacacacacacacacaca
>TU87122
ACAGTTAAATTGACAAGCAACGGCTTCTACAaattaatgatttatttttccAAGGTTATTTACATTATGTACACCAACACATCCCCAAAATACACTACATACAGTAACACTATGCACAAAATCTCAGAAAGATTGTGTGCAATGAAAGCAGGTATCTTCATCAGTTATACAGTGTATCAGTAATCTCTCAGCACAAGGCACACTTCTTGGacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacac

Function

symbol description
lipg Predicted to enable lipoprotein lipase activity and phospholipase activity. Predicted to be involved in fatty acid biosynthetic process and triglyceride catabolic process. Predicted to act upstream of or within lipid metabolic process. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in myotome; nervous system; neural tube; and notochord. Human ortholog(s) of this gene implicated in cardiovascular system disease; cerebral infarction; coronary artery disease; and myocardial infarction. Orthologous to human LIPG (lipase G, endothelial type).

NR:

description
PREDICTED: endothelial lipase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87117 True 1428 TUCP 0.44 4 27205234 27301770
TU87119 False 273 lncRNA 0.38 3 27299932 27350555
TU87122 False 280 lncRNA 0.39 2 27299932 27370959

Neighbor

gene id symbol gene type direction distance location
snx18a snx18 coding upstream 11715 27179360 ~ 27193519 (+)
fsta fst coding upstream 193913 27005139 ~ 27011321 (+)
itga2.2 itga2 coding upstream 202590 26981345 ~ 27002644 (+)
paip1 paip1,LOC104941454 coding upstream 230295 26965484 ~ 26974939 (+)
fgf10b fgf10,LOC104956796 coding upstream 243242 26952220 ~ 26961992 (+)
mthfd2l mthfd2l,LOC102288655,LOC100709995 coding downstream 23458 27394417 ~ 27417204 (+)
LOC120560091 NA coding downstream 47750 27418709 ~ 27420717 (+)
LOC120559995 NA coding downstream 51578 27422537 ~ 27428690 (+)
areg NA coding downstream 63036 27433995 ~ 27442196 (+)
gpx8 gpx8,LOC102796953 coding downstream 99297 27470256 ~ 27472819 (+)
G65083 NA non-coding upstream 5044 27199949 ~ 27200190 (+)
LOC120560738 NA non-coding upstream 305676 26897902 ~ 26899558 (+)
G64967 ykt6 non-coding upstream 309091 26893701 ~ 26896143 (+)
G64949 btf3,LOC103470010,LOC107089645,LOC106958054,LOC106926613 non-coding upstream 376049 26761391 ~ 26829185 (+)
G64944 NA non-coding upstream 520979 26682518 ~ 26684255 (+)
G65106 NA non-coding downstream 8039 27378998 ~ 27379215 (+)
G65108 NA non-coding downstream 18498 27389457 ~ 27389862 (+)
G65171 NA non-coding downstream 105789 27476748 ~ 27476966 (+)
G65272 NA non-coding downstream 532116 27903075 ~ 27904933 (+)
G65314 NA non-coding downstream 631580 28002539 ~ 28005121 (+)
ndufs4 ndufs4 other upstream 165635 27012210 ~ 27039599 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other upstream 543339 26644661 ~ 26661895 (+)
cltcl1 LOC100691387,LOC103359525 other upstream 561067 26614237 ~ 26644167 (+)
c6h22orf39 clg12h22orf39 other upstream 708247 26494284 ~ 26496987 (+)
G64814 cldn5,LOC103357131 other upstream 790637 26412869 ~ 26414597 (+)
mboat4 NA other downstream 1474667 28845626 ~ 28849471 (+)
ubac1 ubac1 other downstream 1973621 29344580 ~ 29351756 (+)
fbxo21 fbxo21 other downstream 2815889 30186848 ~ 30212108 (+)
LOC120560820 NA other downstream 2875928 30246887 ~ 30251519 (+)
G65899 taok3 other downstream 3203127 30574086 ~ 30578159 (+)

Expression


Co-expression Network