G65473


Basic Information

Item Value
gene id G65473
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 28985613 ~ 29002180 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU87618
tgcaaatacaCTATAAATGTTTACAAAAGCACTGTAGAAATATCTGTGCAGTGTAAATTATCAAAACTAAAAATGAATATTACATTGAACTCATTTTGCACCTCACATGACAAGGATTGTCATTTTCAGCAGCAAAATAAATTAGTATGTCTTAAGAAGAAATGTCTGTTAGTGACTTCTGAACATGGGGGGGGGAAATGGGGCAATGTGGTTGTTACACCAAAGAGAAAATTAAGGAAAATAATAAAGGATGGTATGGCACTAGTGCTCATCCCTGAAGGAGGGCTTCATTCATCTAGATAGGTTACACAGCATCAATACTTTACTCAGTCATCAAGATAATCAGCCTTCCAgttaaaaaaaccaaacaaaaaacaatcacTCCAGTTTGCCAGAAATGGCCATCGGCTCCACAAACAAATTTACTTAAACCATTCATGAACAGCCTTACAGACATTTTTACAGGTCTCTTACAGCTCCCAGTGAGACATACTGGTCCatctttttacacttttttgtattttcagtgtgaaaaagaaaatgaaatgatcagaaatgaaatgttgaattttaacaaaaaaaaaaaaaaaaaaggaacagaaaaAGGAACTACTTCTACAcaactaacaaaaaaataatcacaaattcaGGGGAAACAAACAAGGTACATAAATATTGTGTGGACCCTtacaaaacaatttattttacACAACTCTGTATTGCTTTGTCTTACATAATACTGAGATCTGCCCACAAAGAGCAATACCCATCAAACCAACTTgtgaaatttatttttttcttgcctTGATGTAAAAaaggcacatacacacatgcgtTCACGCTCACACAACACTGCTGCAAATACTTCACTTAAGTGGTGGcacgataaaaaaataaaaataaaaaaaaaaggtaggcgGTGGTTTTGTGGCACAATCGTTATCACAGAGGAGAGTAAACACGGCGCTGGGTTATCTATGTGGGTTATCTTTGGTCAAGCAGAGAGGAGCCAATAGGCTAAATGATTCAGACTCAAAGGTCGGTGTATTGGAAGTCAGACAGTGGAGGAGTGATGGCTCAGGTGTGTTTAAACAGACGTTGtacaagcaacacacacacacacaactctcgGGATTAAGGTCTCTCAGGTTCAAGTTTTTAAAAAGGTGGATATCGATGAACTGAGTGTGCACGAGACTGTGGTTGCTTGCATGTAGGTGGAATTAAAAAAAGGCCTTTAGTGAATTTGTTCAACCTTTAAAAAGGAATGCGTTCGACCTCTCCACCACAGTGTTCTTTAGAATCAGGCTTCTGACACCGATCTTTGATGAACTGGCTCGCCCTTTTTGGGCACCTCCAGCGAATAGTTAAATTGACTACTCCTATTATAATCCCCAACAATACATGTGATATGGTCAAAATCTTCTGCTAATAAGAGGAATGAGTGTGTTAAGTGTGATAACTTCACAAAAGGGTTGCTAGTGATAACTGTAACTGCTAATTCCAATAAATGGCAGCAAGCTTTGGGCTTTGTATCTTGTGCTCCGATGTCAAAAGGGTTGATAACACAGAAAGCCTTAAAAGAAAAAGCTTCCGTTGATCAACCTGAAAAAGAATACGAGCAGGttatgtacatgtgtgtacaAATACAAGTCCATAGGTTAtggcatttgtttttgtttttagcagCAATACCAAATACAAAAAGTATATCAAAAGAAGACACTCCATGTGCTGAAAAGTAAGTAACACAGAGGCATGGATGTGTGTTGTTCATTTACAACATCCTTCATAACCAATACTAGTTAGAACAAACCATTGAAATGCATTGAACATATGGACCACCTTCAGTGAAATGAACAGGACAAAAACAATATGAAAATACACAGGGCACAATTTCCAGGCAAAGTGCAGGGAATTTTCCACGTTGACAGTTATTATGGCCTTAAATTCACTTCCCGTTAGCGACTAGCACTGGGTTTGACGTGACAAGTGTGGTGgacagaaaaatgaaaacaaatgaaacaTAAGACAAACAGTGATTCAAGTGCTGTGTGCTGCGTTTTGCCTGAATGCCTACAGCTCCTTGGCAAACTGAATGACTGCACAGCGGCAAGTGGTGCACAGAGCCCCCTCAAAACCCCCAATGattccacttttgtttttgtttatagcTACGCCACCTGACAGTGTCTTTGACAGATCAGCTGTAAATCTATATCATaataggacaaaaaaaaaaaaaacaacaactggtAGCCTTGTGTAAGGACTGGTTTTAGCAATCCAAATTGTGCTTTCTCTAATAAGTAAGTAACAGTGTAGACGTGCAGGAGCGGTCGACACCAGAGCAAAATTAGTGTCTTACAGCACACCTAGAAGGACTGCTTGCTAGATTTGGTCAGAGGTATCTCAACATTTCCCCCTTTTACATATGTACAATAACAGAAGAGATTTCCAGCTTATCTGAACAATGTAGAAACATACAGAACACACTGAACCATTATAAGGCAGAAAGCAGGTTCAAGTCTCCCTTGTAAGttctgtgggtcttttttttttcttcccctttttaaaaagggagtACAACTCACCTTTTTTAACCGGCTGTGGATCATTGTTTGGAAGACTTGAGCCACGACCAGGGCGATCCCGACTATCAGGAGGTGAGCACACACGATACCGGTGGCGTAAATGGCACAGGATCTCCGAGTCATGATGCCGGGAGTCGGATGGGCTGTCCTCTCGGAgtggatacaaaaaaaaaaacttcactgaAGTCGATGGTAACGTCCCAAAAAACTATACACAAATTCAACTAAAGACAAGTGATGTGCTGGACCGTGAAGCCTCGATCCACCGTCTCGTGAGCAGCTGCTGGGGTTTAAACTTCTCTCTTTAACCGCCCTGTGGACTGATCTTCGCGTTGAGGCTGGGGGTACGGGAAAAGAATCAAAAACGTTGGCACTTGTCGTCAAAAAGCGAGAGAACACTTAAAgctaaagagaaagagaggaccGAGCTGCTCGGAGACGGTGGTGAAATGAAACAGCAGCTCTCAGCACATCGTAGAAGAAGAGCTGTccacctcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87618 True 3093 lncRNA 0.40 2 28985613 29002180

Neighbor

gene id symbol gene type direction distance location
LOC120560307 LOC103366435,LOC100706955,LOC101475748 coding upstream 6127 28963413 ~ 28979486 (+)
LOC120561296 LOC104963268,LOC101073255 coding upstream 29785 28940542 ~ 28955828 (+)
hint2 hint2,LOC102195764,LOC100691034,LOC101473821 coding upstream 46971 28934966 ~ 28938642 (+)
emb NA coding upstream 57765 28918006 ~ 28927848 (+)
malt1 LOC102297700,LOC100707481,LOC102194418,LOC101473126,LOC102781556 coding upstream 69003 28902756 ~ 28916610 (+)
zgc:158260 NA coding downstream 11426 29013606 ~ 29016925 (+)
LOC120560871 ccng2,LOC102294549,LOC100696397,LOC102783398 coding downstream 33835 29036015 ~ 29040829 (+)
LOC120560378 st8sia3,LOC104919001,LOC100693561,LOC102785111,LOC102199258,LOC101477372 coding downstream 39760 29041940 ~ 29050224 (+)
zgc:152968 NA coding downstream 58567 29060747 ~ 29072167 (+)
ptgs1 LOC103362336 coding downstream 201313 29203493 ~ 29214795 (+)
G65418 NA non-coding upstream 169213 28816185 ~ 28816400 (+)
G65417 NA non-coding upstream 170137 28815254 ~ 28815476 (+)
G65396 NA non-coding upstream 219388 28766020 ~ 28766225 (+)
G65394 NA non-coding upstream 229420 28755865 ~ 28756193 (+)
G65385 NA non-coding upstream 364314 28621085 ~ 28621299 (+)
LOC120560778 NA non-coding downstream 70761 29072941 ~ 29131216 (+)
G65565 LOC108233773,LOC103375797 non-coding downstream 76246 29078426 ~ 29098313 (+)
G65570 NA non-coding downstream 101808 29103988 ~ 29105609 (+)
G65710 NA non-coding downstream 545269 29547449 ~ 29614880 (+)
G65713 NA non-coding downstream 586827 29589007 ~ 29591364 (+)
mboat4 NA other upstream 136142 28845626 ~ 28849471 (+)
G65084 lipg other upstream 1614654 27205234 ~ 27370959 (+)
ndufs4 ndufs4 other upstream 1946014 27012210 ~ 27039599 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other upstream 2323718 26644661 ~ 26661895 (+)
cltcl1 LOC100691387,LOC103359525 other upstream 2341446 26614237 ~ 26644167 (+)
ubac1 ubac1 other downstream 342400 29344580 ~ 29351756 (+)
fbxo21 fbxo21 other downstream 1184668 30186848 ~ 30212108 (+)
LOC120560820 NA other downstream 1244707 30246887 ~ 30251519 (+)
G65899 taok3 other downstream 1571906 30574086 ~ 30578159 (+)
LOC120561064 NA other downstream 1855400 30857580 ~ 30893280 (+)

Expression


Co-expression Network