G65713


Basic Information

Item Value
gene id G65713
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 29589007 ~ 29591364 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU87931
CAGAGTTATAAAAGTTGTATTTAATACAAAACATTGACAATTTATTTACATAGCCTatcaagaaaagaaataaaaggatCAGAATATTTATAGCAGTGCTGTAGAAAGTCaggcgtgttttttttttggactggATTGTGAATGTAAAGATAAAGAGAATAATAACCTATAATTCATCATTCACAAGGGTTTTGTCACATCAAGATGGGTCTAAAGGGGACGCAAAACAGGTCTTaaccttgtgtggtccttcgggtcacagggacccaaaggacaacacaagggttatgtacttctgtttattttgttgagaattgcgctctaaaccctgtttcttgtaaagtaagtaaagtttgtttctagagcacatttaaacacagtttaagctaaccaaaatgctgtacaaacaagcactaaagtgctgtattaaccctcgttttgtccttcgggtcaccaggacccaaaggaccacacaaggttTAAAAATCATTACCATACCTAGCTACAAACTGGAGAAAGCATACCCCTGAAACTTTCTACGGGATGCAAAAACTGGCACTACTCCTTGGACAGAGACTAAGGTGTTACTTCTTTAAACCAGTATTTTTCCACCCAAATTACATTCAAATTCTGGGTCATTACTATCAGAAAATGCTGATATAAAAACGTCATTGTTAAGACAAATCCGCATTTTACAGTTTCAGAGTCAGTGTCCTGTTCATTGTTGCCATCTGTGGGCTTTCTTTACAACTTTCTAGCCTCTGACAAGTTATCCAGTTTTACTTCGGCAAGCTATATTACACTGTATCAATAGGCTTATTGGAAATATCACAGTCCAAGTTTTGTGTTAAAGGCCTATCCGCACATTTGAAGAGGAATCCGTCTATCCAGCAAAAGGGTTTGCATGAATGGTCACATCCTTTATCCGTGTTTCAGTCAGGGGTCGGAATGTCTTCTCATTGACAGGCAGTTTCTCCAGTTCATCCAGTGTTTCCAGGCCATCTATAATCTTCCAAACACTGTGTACTTCATGTCTAGATGGGGCTGTTTGGCATATGTGAAGAAAAACTGGGAGCCATTTGTGTTGGGGCCATTGTTTGCCATTGAGACCACTCCTCTTACATTATGCTGAAATAAAAGAAAGCAAAAGAACACAAGTTACAATGTTTAAGACTGACCCCTGATTAAATATTATGTCAAACTTCTTCCTGACATAGGCAAACAAGCGGG

Function

GO: NA

KEGG:

id description
ko00230 Purine metabolism
ko00240 Pyrimidine metabolism
ko03020 RNA polymerase
ko04623 Cytosolic DNA-sensing pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU87931 True 1230 lncRNA 0.39 2 29589007 29591364

Neighbor

gene id symbol gene type direction distance location
col27a1b LOC100698351 coding upstream 5438 29514026 ~ 29583569 (+)
LOC120560080 LOC104962503,LOC102314469,LOC102076298,LOC103353443 coding upstream 85056 29496780 ~ 29503951 (+)
LOC120561062 LOC104962503,LOC102314469 coding upstream 93865 29493252 ~ 29495142 (+)
LOC120560482 NA coding upstream 198223 29382376 ~ 29390784 (+)
camsap1b camsap1 coding upstream 206712 29354120 ~ 29382295 (+)
hscb hscb,LOC102796510 coding downstream 15874 29607238 ~ 29620658 (+)
scarf2 scarf2 coding downstream 446188 30037552 ~ 30058804 (+)
selenoe LOC104961905,LOC101066385,LOC105931211,LOC108246935,LOC103369776 coding downstream 478047 30069411 ~ 30071555 (+)
zgc:112294 LOC104923678,LOC103369777,LOC100697282 coding downstream 480400 30071764 ~ 30074597 (+)
tesca tesc coding downstream 606265 30197629 ~ 30222525 (+)
LOC120560778 NA non-coding upstream 457791 29072941 ~ 29131216 (+)
G65570 NA non-coding upstream 483398 29103988 ~ 29105609 (+)
G65565 LOC108233773,LOC103375797 non-coding upstream 490694 29078426 ~ 29098313 (+)
G65473 NA non-coding upstream 586827 28985613 ~ 29002180 (+)
G65418 NA non-coding upstream 772607 28816185 ~ 28816400 (+)
G65734 NA non-coding downstream 180275 29771639 ~ 29771864 (+)
G65738 NA non-coding downstream 220608 29811972 ~ 29812218 (+)
G65745 NA non-coding downstream 344529 29935893 ~ 29936995 (+)
G65747 NA non-coding downstream 346253 29937617 ~ 29937843 (+)
G65748 NA non-coding downstream 346490 29937854 ~ 29938145 (+)
ubac1 ubac1 other upstream 237251 29344580 ~ 29351756 (+)
mboat4 NA other upstream 739536 28845626 ~ 28849471 (+)
G65084 lipg other upstream 2218048 27205234 ~ 27370959 (+)
ndufs4 ndufs4 other upstream 2549408 27012210 ~ 27039599 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other upstream 2927112 26644661 ~ 26661895 (+)
fbxo21 fbxo21 other downstream 595484 30186848 ~ 30212108 (+)
LOC120560820 NA other downstream 655523 30246887 ~ 30251519 (+)
G65899 taok3 other downstream 982722 30574086 ~ 30578159 (+)
LOC120561064 NA other downstream 1266216 30857580 ~ 30893280 (+)
dmrt3a dmrt3 other downstream 2216431 31807795 ~ 31811553 (+)

Expression


Co-expression Network