G65881


Basic Information

Item Value
gene id G65881
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 30417513 ~ 30421446 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU88138
tcCAAAATGAAAAGATCTTTTTATTGTCATACACTTTGTAAAGGATGAGTGcaaataaaagagcttgtgatcAAAATCTACTCATCACTAAGCCATGGACCATAAGGCATCATTAAATACAAGCTTTTTGGACTATCATCTACTATACAAGGACGGAATCAAGGAAAAGAAACAACACAGCATCAATGCGTATGCAATTAGaaggaaaatggaggaaaagaaatgtaaatgaacagaaaacagaaacaacaaaaacacaacacaatttgTACATTCAAAAGAAAGAAGTCCAAAAATTCACAAGGAATATTGATATTACGGCAAGTGACGATAAAACATAGTCTACAATCTGCTATGTACACTTGGCACTAATGTTAGATCTTTGATTGTTGTCCAGTCAGGTTGTTGTCAACTCTATCATGTGCACAGGTCgcaactctttttttctttcaatgctAGTCTAATCATTTATATAATCTATAAATATTGTGAAACAATCGTTCTCTCAAACAAAGCTGTTGAAAAGTTCTGCAAAGCCTGACGTAAAACTTCAATATGTATTGAGATCAAACTGCTCAATGGACAACAGTTAATCAGAAAAATGCTCACATAACTTTTTTATATGTAGTgtagaaggattttttttttcataacaaGAATCAATCTTCAATAGTCCATCTCATGCACTTTAAAGTTGTAAACAGTACAAATATAAATGATCCACTTACAATATTTGAATCCCAGCAATTCCAGAATAGAAAGACAGACTCcaaaaaacagcagcagattGTTTGTATGCATTTTCCAACACTGGCAGATGTGTATATAATTAGGTGGAAAATGGCTATTTAACATGATTGGATTGTCTCTTATCTATTCCACGTGGCTAGAGAGAATCAAAAGCAGTATACAGCTTGAACGACGCCACGGCTTCCAAGTCATGATGATATGACTCCAATTTACTATATCTctaaaacatacatttaaaatatattgtgatatagAGTGTGAAGTAGAAAAATGGCCTGGGGTGGTCTTTAGCATCCTGATATGTCTTTTCTGATATGTTAAAGGGAAAGTTCAGCCAGATTTAAGTTACTTAGTTGTTACTTTAACTTTATAATCTAAGAACTCAAAAAACACCACAACAGGTTCGTTAAATAAAATCTTtcaagatttaaaaaacaagaaGGCAAGTTTAGGATTAATTTGTCCACCACAGTCACTTTTTCAGCAGTGTTGTAATCAAAAGTAGCCTAGTTAATACAGAGGCAAGAAAGAGTTTGTTTTTGAAATTAATAAGTAAAACGCTTTTTTTAATTGCAATGGTTAATGAAAGACATTAATTTTCtgtttaaagtgtaaaatatAGAGATACAGCGCTTCGTAGGAGATTCACTAAGCACAACTTAAATCCGGCACCATGAATAGTGGATATAAATAATAGAATAAAGAATAGCAAAAAAGTTGCCTTTATGTGATGTGAAATAACATATCGTCATCCCCTGCTGAACGGTCTTTGTTCTCAAGGTGTgttcagacaaaacaaaaagcttatttttcaccttgctttatttgtatacagctatagcttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgagtgagtgagtgttttCACACTGTTATTCTCATCCAGACCCTGGCGTTTTCCTCTTGTACAATTAACTGTAAACTTATTAATTTGAGTGGACACGTCTTTACCTTAAAGAAAGACTTAAGAGAGATGTAACTACCTAAATACCAGAATCTTCCTCTtacaaattaaaagtttaatTCATAAGTAATACAATGCACTATTGCTACAGTCTGTCTTAGCTTATcatggctaatgttagcaaactttaGATAAATAATGCTATGTAACTGACATTACTGAGCCAGTTCGCGGACTTCTCCTCAAGCGCTACTTTCACAATAGTTTAGCATTTTAGCTAAAAAGTGAgagtggtagtagtagtagtagttttgcCTTCAGCATTATCCTTTAACTGTCGCTTGTAGCGTCAGCGGTCACTGTTCAGCACCTTGAGTGAATCCAGCCTCTGTTTGCATTCACTTCCATCCTTCCAATTGGCTTTGAATGCATTCAAGCTGCCTCTCAAATTCACTTTGCATTCAGTCTGAACACACTTTTATACAGCTGATTTCTCAATGATTTATTAAAGTAATGTACTAATGGTTGGAAGAGATTGATTTGGAAGAGTAAATCTTCAAACATTTTAATCTTTATAgcgtacttttacttgtatgtGATGTCTATGAGTTTATGAGTATGCTCAGGGCTGGGAGGgttactttaaaaatgtattcagaCACAATTACCAAttacctctttaaaaaaaaaatcgtagTCAGTAACCTTATCCAGGATGAATGTAAATTTAAAgtgactacaacactgctttTAAGCAACTCTTAACGAATTTGAATAAGTGAAACACAAACTCCTCAAAGTTTTTGTGTTGCCTTTTTTAAAGGTCATGTGCTCTCCCTTTACATGTCTAACAATCACGTCATTTACTTGTGCGGATCCAAATCATTGGGGTCCTCAGACCTAGGCCCATTACCAACAGGTCTTTGACCCATGTACTGTAGGTCTCCAAACTATTTTATAAAACAGTTTCATACACTGCTCAGAAAGCTAACGTCAGTTCATGTatctattaaaataaaataacttaagGTTACTGCACTGACTATACAGTAGCACGCTTTAGATTTGTATCTGTATCTACAGTTTTATCTTCTGTATCTATCATTAGCTATTTGAAGTAgaatcatttacatttatttctggGGAATGGGAGATGGGGGGCTCAGTGATAGCATTTCTGAAGGGTAATTAGTTCTCCAACAGTTGACGAGATACATTTCAAGTGTCAGCGATTTCACAGAACAGCGTCAAGTGAGGGAGTCCTGATCTGACCAGcggctttttttccccaaaggcTGTAATTGTTCAAACGTCTCGCTTATGTTCACAGGCAATATTCAAAGCACAGGCTGATCAGAGAACATTCTCTCATCAAACAACCGTGCAAACACATCCCCACACAAACAGGGAAGCTGGCTTCTTCACATTCAAATGGTACGGTGTAAATAAGAGgacattttttaagttaaaattAATTTTGGAGACAAACTTGTACAGACATCCACACATGAGAGACCATGAGGTAACATTGACAGAATGCTCTACACAGTTGACAGACATAAGGAATGGGAAGACAATGATATGGAAATATACAATGTGTAATGTACAACAGTTACATtcattcaaaacaaaaacaaagaagacaTGGGAAAGAAAAATCTACATTTGTtctcaaacatgtttttttttaaagttcaggATGATGTGATCAGTCAAAAGTTACAAGCAAGATACATccagaaaataaatcaaatattaTGAAGGGATAAAGTCAAtagtaaaagacaaaaaagataAAGGAAAAATATCCAGTATGGTTTAAAACAAACCAAAGAAAATATGAGTCCCGACTGCTTTGAGAAGCTGAACTtatctgtacacacacatgccaacATTCCATGAAAATACACACAGCGTGGGCAGTTTTCATCACTGGGCTGGCTTTTGGATTCAGTGCATTCTTTAAGGAGGTGGGTTATTTATGTAGAGTTATGGcggctgttgtttttttaatagttgCTGATTGTTTGCTGTTTTGTGTCCCTAACTCATTTGACATACTCAGCTGACTTCCAGAAGTGCCCTGGGTGGGAAAGGCGACGATTCCGTTTTGGCAACTTTTCCAGTAAATCTACCAGCATGGAGAAGCTAGGCCGCTCTTCCTGCTTGTACGCCCAGCACAGAAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88138 True 3934 lncRNA 0.36 1 30417513 30421446

Neighbor

gene id symbol gene type direction distance location
spring1 clg12h12orf49,c21h12orf49,LOC101487986,LOC104923683,LOC102233336 coding upstream 150440 30263603 ~ 30267073 (+)
tesca tesc coding upstream 194988 30197629 ~ 30222525 (+)
zgc:112294 LOC104923678,LOC103369777,LOC100697282 coding upstream 342916 30071764 ~ 30074597 (+)
selenoe LOC104961905,LOC101066385,LOC105931211,LOC108246935,LOC103369776 coding upstream 345958 30069411 ~ 30071555 (+)
scarf2 scarf2 coding upstream 358709 30037552 ~ 30058804 (+)
rfc5 rfc5 coding downstream 102623 30524069 ~ 30530383 (+)
pebp1 pebp1 coding downstream 133567 30555013 ~ 30557814 (+)
suds3 suds3 coding downstream 226927 30648373 ~ 30657730 (+)
srrm4 srrm4 coding downstream 347979 30769425 ~ 30835681 (+)
hspb8 hspb8 coding downstream 416780 30838226 ~ 30849481 (+)
LOC120559990 NA non-coding upstream 29694 30387164 ~ 30387819 (+)
G65792 NA non-coding upstream 194437 30206616 ~ 30223076 (+)
G65777 NA non-coding upstream 265426 30151772 ~ 30152087 (+)
G65771 NA non-coding upstream 320357 30096930 ~ 30097156 (+)
G65770 NA non-coding upstream 322767 30091698 ~ 30094746 (+)
G65883 ksr2 non-coding downstream 9940 30431386 ~ 30431741 (+)
G65890 vsig10 non-coding downstream 118371 30539817 ~ 30540839 (+)
G65951 NA non-coding downstream 332913 30754359 ~ 30837774 (+)
G65958 xbp1 non-coding downstream 484910 30906356 ~ 30909470 (+)
G66015 NA non-coding downstream 708595 31130041 ~ 31154168 (+)
LOC120560820 NA other upstream 165994 30246887 ~ 30251519 (+)
fbxo21 fbxo21 other upstream 205405 30186848 ~ 30212108 (+)
ubac1 ubac1 other upstream 1065757 29344580 ~ 29351756 (+)
mboat4 NA other upstream 1568042 28845626 ~ 28849471 (+)
G65084 lipg other upstream 3046554 27205234 ~ 27370959 (+)
G65899 taok3 other downstream 152640 30574086 ~ 30578159 (+)
LOC120561064 NA other downstream 436134 30857580 ~ 30893280 (+)
dmrt3a dmrt3 other downstream 1386349 31807795 ~ 31811553 (+)
adamts3 adamts3,LOC100699019,LOC101479253,LOC102313231 other downstream 1611130 32032576 ~ 32209534 (+)
G66231 NA other downstream 1704847 32126293 ~ 32136966 (+)

Expression


Co-expression Network