G66256 (slc4a5,LOC102211952,LOC101484802)


Basic Information

Item Value
gene id G66256
gene name slc4a5,LOC102211952,LOC101484802
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 32322507 ~ 32329990 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU88642
AGGGCATTTCATGCGTGGTCAGAGAGAGCTGCAGCATTTACTGTTGATATGTGGGAAGAGTTGCATAGAAGGATAGTAAGGAGTTACATTTATCAGTTTACTGTGGAGCTGTGAGGAAAACACCAAGAGAAGATAGTGAGGAAAGAAATGGTTTTAAAATGACTTCATTAAGTAAAagaaagttgttgttttttaaagtgtgtcGTGTTAAGACCATGTACCACATACTCAGAGCAAAGTgctgaaataattgtttttaaaggAAAGTAAAAGTTATCTCGCGGGTGCTGCAGGAGTCGCCTGTCAGGAGTCGCGGTGGTTGGGTGCTCTACAAAGACGTTTCAGATCCTCTGCTCTTCCAGTAGAACGCATTATCATCGTCTGGGTCCATGTCTATTGTAATCTGAGGCACAGACTTCAGCGGACTCATCTCAGGGCTGGACAAGCAGTTGGCCTGGTAGTAGCGAAGCTGCTCAGCACGATGTGTGTCGTTCAAGGAATGATGGGGATTTATCTCGTCATCAGCATCGCTGTCTATGCTgccttgttttttctttttcttcttctcgtcctctttcttcttcttgtccttCTCTGGGATGATGTCGTCCAGGAAGCTGAGATCATGCTGGGAGAACATGTAGTCCATCACTTTTCTGACGGCCACCAGAGCGAGGATCTAAACGCAGAAGAACAAGATGATTTGAGTGGAATGGGAGGTCATTTGTTGAATTAATGATCAGTCTGGTCGAT

Function

symbol description
slc4a5 Predicted to enable sodium:bicarbonate symporter activity. Predicted to be involved in several processes, including bicarbonate transport; regulation of intracellular pH; and renal system process. Predicted to act upstream of or within several processes, including cerebrospinal fluid secretion; mitochondrion distribution; and retina development in camera-type eye. Part of apical plasma membrane.

NR:

description
PREDICTED: electrogenic sodium bicarbonate cotransporter 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88642 True 753 TUCP 0.44 3 32322507 32329990

Neighbor

gene id symbol gene type direction distance location
smarca2 smarca2 coding upstream 355773 31906122 ~ 31966734 (+)
dmrt2a dmrt2 coding upstream 496789 31820669 ~ 31825718 (+)
dmrt1 NA coding upstream 520054 31770292 ~ 31802453 (+)
kank1a kank1 coding upstream 565003 31699526 ~ 31757504 (+)
ctsla LOC104932682 coding upstream 647392 31670525 ~ 31675115 (+)
rufy3 rufy3 coding downstream 74397 32404387 ~ 32426382 (+)
trnap-ugg NA coding downstream 241698 32571688 ~ 32571759 (+)
ascc2 ascc2 coding downstream 284902 32614892 ~ 32626689 (+)
LOC120560720 sec14l2 coding downstream 306846 32636836 ~ 32659330 (+)
rusc2 rusc2,LOC104944866 coding downstream 524724 32854714 ~ 32901547 (+)
G66255 NA non-coding upstream 31488 32290772 ~ 32291019 (+)
G66253 NA non-coding upstream 73267 32249001 ~ 32249240 (+)
LOC120561307 NA non-coding upstream 558734 31759188 ~ 31763773 (+)
G66117 NA non-coding upstream 812151 31461798 ~ 31510356 (+)
LOC120560111 LOC108434293 non-coding upstream 837506 31478501 ~ 31485001 (+)
G66294 NA non-coding downstream 141195 32471185 ~ 32474048 (+)
G66295 NA non-coding downstream 144497 32474487 ~ 32475080 (+)
G66293 NA non-coding downstream 181629 32511619 ~ 32515505 (+)
G66319 NA non-coding downstream 283009 32612999 ~ 32613908 (+)
LOC120560708 NA non-coding downstream 355279 32685269 ~ 32694087 (+)
adamts3 adamts3,LOC100699019,LOC101479253,LOC102313231 other upstream 112973 32032576 ~ 32209534 (+)
G66231 NA other upstream 185541 32126293 ~ 32136966 (+)
dmrt3a dmrt3 other upstream 510954 31807795 ~ 31811553 (+)
LOC120561064 NA other upstream 1429227 30857580 ~ 30893280 (+)
G65899 taok3 other upstream 1744348 30574086 ~ 30578159 (+)
G66263 LOC106536102 other downstream 34870 32364860 ~ 32369984 (+)
mapk1 mapk1,LOC103371039,LOC107386038 other downstream 110385 32440375 ~ 32470827 (+)
LOC120560610 ypel1,ypelc,YPEL1,ypeld,LOC103374080,LOC106586007,LOC106931471 other downstream 147048 32477038 ~ 32510737 (+)
slc39a14 slc39a14 other downstream 242210 32572200 ~ 32612938 (+)
cds1 cds1,LOC103364266,LOC106922331,LOC103134889,LOC107386064 other downstream 747256 33077246 ~ 33112816 (+)

Expression


Co-expression Network