LOC120561070


Basic Information

Item Value
gene id LOC120561070
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 34765930 ~ 34773806 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU89395
AGCAGAGTCACTCGGTCGACCTCATCACACCACAGCAACAAGTGGCAGAAACTGTCTTAAATGATTGAATAAATCAAGAAGTCCACGTCTGAACCATGAACAAACGAAAACTGAGTTTCAAATGGTTTGGGAGCCTCAGCAATCTCTCCACCCGCCGCCAGTCGGAGAAGGCCAACATCAAGTCAGTCCCAGAGCATGATGGGAGCCGCAGCGGTGCCAAATCAGCAGCGGGGGAACAATCGGTGGACGACATGGAGGACTGTCTCCGCAGCCCCAGCTACGCCCGCTCCAGCGAGATGTACACACATGTGGGCACTGTGCCACGCAGCCAGACACAGAAGAAGAGCTGCAGGGGgctgaaggagaagaagaagaaagaggaggaggggttGGTGAGTGGAGGGCAGAGCCAGTGGAAGGCGGGGGAACATGTCCGAGACTCCCCTCTGCTCGGTGCCCTGTCCGGCCTCAGTACGACCAGTCTGGACCGGCCTCTACCTGTTTCTGCACCGGCCTGGCCGCTGCCCGCCACCCCGACACCCAGCCAGGCTTCACCTTTGACCTCAGCACCTGAAAGCTGCTTCAATGATCCTTCAGTGGACCCCGTTTGGAGCTCAGGGTCATTGTCAAAGAGCAGGGATGCTTTAGAAACTGGTAGAGCTGTAAGAGAGGCTTCTAACATGGCGACCAATGGCACCAAAGCGGCTTTGCCGCAGGATGTTTACGTTCCGATGGATCCGATAGCTGAAGCAGCTCGCAGCCACGTGGGCATCCc
>XM_039804034.1
TGTTCAGAAGACAGGAAGCAGAGTCACTCGGTCGACCTCATCACACCACAGCAACAAGTGGCAGAAACTGTCTTAAATGATTGAATAAATCAAGAAGTCCACGTCTGAACCATGAACAAACGAAAACTGAGTTTCAAATGGTTTGGGAGCCTCAGCAATCTCTCCACCCGCCGCCAGTCGGAGAAGGCCAACATCAAGTCAGTCCCAGAGCATGATGGGAGCCGCAGCGGTGCCAAATCAGCAGCGGGGGAACAATCGGTGGACGACATGGAGGACTGTCTCCGCAGCCCCAGCTACGCCCGCTCCAGCGAGATGTACACACATGTGGGCACTGTGCCACGCAGCCAGACACAGAAGAAGAGCTGCAGGGGgctgaaggagaagaagaagaaagaggaggaggggttGGTGAGTGGAGGGCAGAGCCAGTGGAAGGCGGGGGAACATGTCCGAGACTCCCCTCTGCTCGGTGCCCTGTCCGGCCTCAGTACGACCAGTCTGGACCGGCCTCTACCTGTTTCTGCACCGGCCTGGCCGCTGCCCGCCACCCCGACACCCAGCCAGGCTTCACCTTTGACCTCAGCACCTGAAAGCTGCTTCAATGATCCTTCAGTGGACCCCGTTTGGAGCTCAGGGTCATTGTCAAAGAGCAGGGATGCTTTAGAAACTGGTAGAGCTGTAAGAGAGGCTTCTAACATGGCGACCAATGGCACCAAAGCGGCTTTGCCGCAGGATGTTTACGTTCCGATGGATCCGATAGCTGAAGCAGCTCGCAGCCACGTGGGCATCCcacagggaggggggggggggggccgcaAGGGGGGCCACACACCACCCAACAAATTTAAGGCGGGCTTGGGGGAGGGAAGCGTGGTGACAGGTGAGAAAGTGGATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89395 False 775 TUCP 0.57 2 34765946 34773700
XM_039804034.1 True 897 mRNA 0.58 2 34765930 34773806

Neighbor

gene id symbol gene type direction distance location
LOC120560310 LOC103361049,LOC104963356,LOC100691800,LOC102799434 coding upstream 173214 34588133 ~ 34592716 (+)
p2rx7 p2rx7 coding upstream 202779 34551118 ~ 34563151 (+)
gstt1a LOC104934872 coding upstream 230225 34527409 ~ 34535705 (+)
smarcb1a smarcb1,LOC103361055,LOC106521870,LOC108242792,LOC100696262,LOC105917974 coding upstream 327423 34427821 ~ 34438507 (+)
si:ch211-251j10.3 ralgds,LOC102776401 coding upstream 344436 34351711 ~ 34421494 (+)
sh2d3cb LOC103373862 coding downstream 943 34774749 ~ 34805947 (+)
tor2a tor2a,LOC102798550 coding downstream 35278 34809084 ~ 34814495 (+)
LOC120561071 NA coding downstream 111732 34885538 ~ 34895629 (+)
LOC120561072 NA coding downstream 177696 34951502 ~ 34952477 (+)
mymk tmem8c,LOC107720238 coding downstream 351753 35125559 ~ 35131747 (+)
G66769 NA non-coding upstream 256317 34508142 ~ 34509613 (+)
G66695 NA non-coding upstream 279179 34486538 ~ 34486751 (+)
G66692 LOC104949787,LOC104934882 non-coding upstream 309181 34456490 ~ 34456749 (+)
G66689 NA non-coding upstream 326002 34430942 ~ 34439928 (+)
G66652 NA non-coding upstream 484001 34187830 ~ 34281929 (+)
G66830 NA non-coding downstream 41783 34815589 ~ 34816327 (+)
G66834 NA non-coding downstream 55086 34828892 ~ 34829654 (+)
G66907 NA non-coding downstream 226472 35000278 ~ 35002196 (+)
LOC120561203 NA non-coding downstream 481855 35255661 ~ 35258072 (+)
G66997 NA non-coding downstream 614970 35388776 ~ 35417807 (+)
cfap157 NA other upstream 238525 34514010 ~ 34527405 (+)
G66578 NA other upstream 989532 33775925 ~ 33776398 (+)
antxr2a antxr2 other upstream 1162305 33517599 ~ 33603625 (+)
cds1 cds1,LOC103364266,LOC106922331,LOC103134889,LOC107386064 other upstream 1653114 33077246 ~ 33112816 (+)
slc39a14 slc39a14 other upstream 2152992 32572200 ~ 32612938 (+)
G66832 NA other downstream 87693 34861499 ~ 34864690 (+)
LOC120561428 fam163b,LOC103374717,LOC102797860,LOC101061299,LOC102298266,LOC101485828,LOC104964271,LOC102215914 other downstream 273038 35046844 ~ 35059631 (+)
LOC120560625 cep120 other downstream 748859 35522665 ~ 35549231 (+)
G67146 NA other downstream 1067068 35840874 ~ 35852056 (+)
G67145 NA other downstream 1067728 35841534 ~ 35854161 (+)

Expression


Co-expression Network