G68871


Basic Information

Item Value
gene id G68871
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 40869089 ~ 40943946 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU92210
acacacacacacacacacacacacacacacacacacacacgcacacacacacacacacacactaaaagcaAAGCCAGGTTTCAGGAGTGTTCAGATGTGTTTCAGGCGTTCAACGTGAGACTAAGAAGGAGAAAAGGAAACTGCGGCTGGCTGCTCTGGCTGCAGCATCGAGAGGATTGAAGGACAACTTTACAGTTCTTATCCCTCCGGTTGTTCCCAGGTCAAAACTGACCCGTTTTCAACCATTttttatgtcgaaaaatttgggtttctttcaaccaaccTGCCCAAAAACAACATGGATGCACGGAAGCTGCTTCTTCTATGCGCCCGTtgtgttttattaataaaattgtGTCTCATATTAGGGAAGATGAAGAGCACAACATCTGTACACTTAAAAATTTACGATGTCAATATTCGTGTATTTCTCCCCCGGTGTTTTGTCGAATTTGTcatcgttttttttgttttttcgaacttttttgtttttattcgtaatttttgtcgctttttttgtgattaacaatttttttcttcattttttttaacaaaatacagaacattacaactcacatttgctgcttttttcaacgtttttttgtcagttttctttaataaaaaggtctgtgattcactcaacatccctCTGATCTTAACAGTaagtacaaatacatttttttttttactcaaattttttttataatatcatataaataaggtttattgagaattaatggaaaaaaaacttcggaaaaagtgacaaaaacggaAAAAAAGTGTTGCGTAGTTTTGTTGCCTCACCTGATTTCATTGTACTGTTTCACTGTAAATAGCTTTAAAgcagggatgcactgaatccaggattgggcttctgattgggctgaatatttgggctttttgacgagggttctggtttctgccgaaaaatgtattattaacaAGTTTCATcgttgacagtgtgtgtgtgtgtgtgtggtgtgtgtgtgtgtctgtgtgtgtgttcatgtgtttgtgtatatatatgtaaaaaaatgtattattaacaAGTTTCATcgttgacagtgtgtgtgtgtgtgtctgtgtgagtgtctgtgtgtatgtgtctgtctttgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgagtgtctgtgtgtatgtgtctgtctttgtgtgtgtgtgtgtgtgtgtgtgtgtacttgtgtgtgtacgtgtgtgtctgtctgtctgtgttcatCAGACCCAAACAGAATCTACAGATTGTTTCTTAGCAGTTTTCTGCCCATGGgtggagatgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatacgtgtgtgtgtgtgtgtgtgtgtatatacgtgtgtgcgtgtgtgtgtctgagtgtttgAGAAGCGCTGTATGAATAAAAcatatcattattaattaagttTCCTGGTCGAGAGGACGACAACAGAAGGGATAATAAAAAGGTGATGCTGCAGCAAGAAGTCTTCGTGTGTTTTCCGTTTCTCCCCCCGAAGACTTTTTCTTATCGTTCAACGTTCAACCTGTTCAAGGAAGAGCTGTTGGAcgatttatttctttaaaaaaaaggtgctaAACAGCACGGGGCCTGCGCGGTTTTTACTCATTTCTCAGTCAAAAATATGTgacgaaaagaaaagaaaaaggaaaatgtaaaatgtatgtcCAATGATTAGTTTTTCCTTCCGTATCCGtttacttctctctctctctctctctctctctttctcattttGTCAGTCTTGGTCAACGGTGGCACGACCTCTCTAAgtcctctgttgttgttgttgtcacgTCAGCATGTCGGTACCTTCTCGCCGCGGCGACTTGGCGGCCGGCGGAGAACTCTGTTGTTGGTCGtcttcttcgtcttcttcttcttcggtgAAGTACAGTTCTGCAGGTTTTCGTGCCACGAAGAAAACACAGTCGTAGATGTATCTCAACATGGAGCGGTCGTTCTCCGTGTAGGTCGTCTGAACGGA
>TU92212
gtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtatgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtatgtgtctgtgtgtgtgtgtatgtgtgtgtgtgtgtctgtgtgtatgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatacgtgtgtgtgtgtgtgtgtgtgtatatacgtgtgtgcgtgtgtgtgtctgagtgtttgAGAAGCGCTGTATGAATAAAAcatatcattattaattaagttTCCTGGTCGAGAGGACGACAACAGAAGGGATAATAAAAAGGTGATGCTGCAGCAAGAAGTCTTCGTGTGTTTTCCGTTTCTCCCCCCGAAGACTTTTTCTTATCGTTCAACGTTCAACCTGTTCAAGGAAGAGCTGTTGGAcgatttatttctttaaaaaaaaggtgctaAACAGCACGGGGCCTGCGCGGTTTTTACTCATTTCTCAGTCAAAAATATGTgacgaaaagaaaagaaaaaggaaaatgtaaaatgtatgtcCAATGATTAGTTTTTCCTTCCGTATCCGtttacttctctctctctctctctctctctctttctcattttGTCAGTCTTGGTCAACGGTGGCACGACCTCTCTAAgtcctctgttgttgttgttgtcacgTCAGCATGTCGGTACCTTCTCGCCGCGGCGACTTGGCGGCCGGCGGAGAACTCTGTTGTTGGTCGtcttcttcgtcttcttcttcttcggtgAAGTACAGTTCTGCAGGTTTTCGTGCCACGAAGAAAACACAGTCGTAGATGTATCTCAACATGGAGCGGTCGTTCTCCGTGTAGGTCGTCTGAACGGA
>TU92213
gtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtatgtatgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatacgtgtgtgtgtgtgtgtgtgtgtatatacgtgtgtgcgtgtgtgtgtctgagtgtttgAGAAGCGCTGTATGAATAAAAcatatcattattaattaagttTCCTGGTCGAGAGGACGACAACAGAAGGGATAATAAAAAGGTGATGCTGCAGCAAGAAGTCTTCGTGTGTTTTCCGTTTCTCCCCCCGAAGACTTTTTCTTATCGTTCAACGTTCAACCTGTTCAAGGAAGAGCTGTTGGAcgatttatttctttaaaaaaaaggtgctaAACAGCACGGGGCCTGCGCGGTTTTTACTCATTTCTCAGTCAAAAATATGTgacgaaaagaaaagaaaaaggaaaatgtaaaatgtatgtcCAATGATTAGTTTTTCCTTCCGTATCCGtttacttctctctctctctctctctctctctttctcattttGTCAGTCTTGGTCAACGGTGGCACGACCTCTCTAAgtcctctgttgttgttgttgtcacgTCAGCATGTCGGTACCTTCTCGCCGCGGCGACTTGGCGGCCGGCGGAGAACTCTGTTGTTGGTCGtcttcttcgtcttcttcttcttcggtgAAGTACAGTTCTGCAGGTTTTCGTGCCACGAAGAAAACACAGTCGTAGATGTATCTCAACATGGAGCGGTCGTTCTCCGTGTAGGTCGTCTGAACGGA
>TU92214
acacacacacacacacacacacacacacacacacacacacgcacacacacacacacacacacactaaaagcaAAGCCAGGTTTCAGGAGTGTTCAGATGTGTTTCAGGCGTTCAACGTGAGACTAAGAAGGAGAAAAGGAAACTGCGGCTGGCTGCTCTGGCTGCAGCATCGAGAGGATTGAAGGACAACTTTACAGTTCTTATCCCTCCGGTTGTTCCCAGGTCAAAACTGACCCGTTTTCAACCATTttttatgtcgaaaaatttgggtttctttcaaccaaccTGCCCAAAAACAACATGGATGCACGGAAGCTGCTTCTTCTATGCGCCCGTtgtgttttattaataaaattgtGTCTCATATTAGGGAAGATGAAGAGCACAACATCTGTACACTTAAAAATTTACGATGTCAATATTCGTGTATTTCTCCCCCGGTGTTTTGTCGAATTTGTcatcgttttttttgttttttcgaacttttttgtttttattcgtaatttttgtcgctttttttgtgattaacaatttttttcttcattttttttaacaaaatacagaacattacaactcacatttgctgcttttttcaacgtttttttgtcagttttctttaataaaaaggtctgtgattcactcaacatccctCTGATCTTAACAGTaagtacaaatacatttttttttttactcaaattttttttataatatcatataaataaggtttattgagaattaatggaaaaaaaacttcggaaaaagtgacaaaaacggaAAAAAAGTGTTGCGTAGTTTTGTTGCCTCACCTGATTTCATTGTACTGTTTCACTGTAAATAGCTTTAAAgcagggatgcactgaatccaggattgggcttctgattgggctgaatatttgggctttttgacgagggttctggtttctgccgaaaaatgtattattaacaAGTTTCATcgttgacagtgtgtgtgtgtgtgtgtggtgtgtgtgtgtgtctgtgtgtgtgttcatgtgtttgtgtatatatatgtaaaaaaatgtattattaacaAGTTTCATcgttgacagtgtgtgtgtgtgtctgtgtgagtgtctgtgtgtatgtgtctgtctttgtgtgtgtgtgtgtgtgtgtgtgtgtacttgtgtgtgtacgtgtgtgtctgtctgtctgtgttcatCAGACCCAAACAGAATCTACAGATTGTTTCTTAGCAGTTTTCTGCCCATGGgtggagatgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatacgtgtgtgtgtgtgtgtgtgtgtatatacgtgtgtgcgtgtgtgtgtctgagtgtttgAGAAGCGCTGTATGAATAAAAcatatcattattaattaagttTCCTGGTCGAGAGGACGACAACAGAAGGGATAATAAAAAGGTGATGCTGCAGCAAGAAGTCTTCGTGTGTTTTCCGTTTCTCCCCCCGAAGACTTTTTCTTATCGTTCAACGTTCAACCTGTTCAAGGAAGAGCTGTTGGAcgatttatttctttaaaaaaaaggtgctaAACAGCACGGGGCCTGCGCGGTTTTTACTCATTTCTCAGTCAAAAATATGTgacgaaaagaaaagaaaaaggaaaatgtaaaatgtatgtcCAATGATTAGTTTTTCCTTCCGTATCCGtttacttctctctctctctctctctctctctttctcattttGTCAGTCTTGGTCAACGGTGGCACGACCTCTCTAAgtcctctgttgttgttgttgtcacgTCAGCATGTCGGTACCTTCTCGCCGCGGCGACTTGGCGGCCGGCGGAGAACTCTGTTGTTGGTCGtcttcttcgtcttcttcttcttcggtgAAGTACAGTTCTGCAGGTTTTCGTGCCACGAAGAAAACACAGTCGTAGATGTATCTCAACATGGAGCGGTCGTTCTCCGTGTAGGTCGTCTGAACGGA

Function

GO: NA

KEGG:

id description
ko03013 Nucleocytoplasmic transport
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
TU92210 True 2086 lncRNA 0.41 2 40869089 40882771
TU92212 False 909 lncRNA 0.45 2 40869089 40897106
TU92213 False 849 lncRNA 0.45 2 40869089 40943946
TU92214 False 2028 lncRNA 0.40 3 40869089 40882771

Neighbor

gene id symbol gene type direction distance location
LOC120561018 NA coding downstream 68394 40799599 ~ 40800695 (-)
LOC120560039 NA coding downstream 203972 40657612 ~ 40665117 (-)
ciao1 ciao1 coding downstream 217494 40642729 ~ 40651595 (-)
bnip3la LOC100711031,LOC102292245,LOC101477054,LOC103356614,LOC102193827 coding downstream 577514 40278060 ~ 40291575 (-)
dpysl2a LOC100711297,LOC102201039,LOC101475506 coding downstream 599869 40221529 ~ 40269220 (-)
LOC120560210 NA coding upstream 327971 41271917 ~ 41277186 (-)
LOC120560230 NA coding upstream 346664 41290610 ~ 41456856 (-)
LOC120560225 NA coding upstream 355208 41299154 ~ 41303757 (-)
LOC120560207 NA coding upstream 395226 41339172 ~ 41346327 (-)
LOC120560235 NA coding upstream 414350 41358296 ~ 41361770 (-)
G68875 NA non-coding downstream 30608 40802574 ~ 40838481 (-)
G68765 tmem127 non-coding downstream 136329 40677149 ~ 40732760 (-)
G68857 NA non-coding downstream 177133 40691414 ~ 40691956 (-)
G68774 NA non-coding downstream 224002 40644760 ~ 40645087 (-)
G68843 NA non-coding downstream 230969 40637326 ~ 40638120 (-)
G68963 NA non-coding upstream 2292 40946238 ~ 41084401 (-)
G68965 NA non-coding upstream 5598 40949544 ~ 40949896 (-)
G68966 NA non-coding upstream 33057 40977003 ~ 41014149 (-)
G68971 NA non-coding upstream 39545 40983491 ~ 41070132 (-)
G68973 NA non-coding upstream 40852 40984798 ~ 41053920 (-)
ppp2r2aa LOC104921711,LOC103356615,LOC108236503,LOC104961741,LOC106520125 other downstream 538394 40313369 ~ 40330695 (-)
LOC120560061 NA other downstream 842346 40000006 ~ 40026743 (-)
G68717 NA other downstream 933243 39935372 ~ 39935846 (-)
LOC120560826 pitpnb,LOC104952320 other downstream 1407521 39410239 ~ 39461568 (-)
LOC120560036 NA other downstream 2524293 38336088 ~ 38344796 (-)
G68985 NA other upstream 132059 41076005 ~ 41077465 (-)
LOC120560231 NA other upstream 375250 41319196 ~ 41401901 (-)
G68897 NA other upstream 808590 41752536 ~ 41829133 (-)
G68907 NA other upstream 810926 41754872 ~ 41782162 (-)
G68883 NA other upstream 892601 41836547 ~ 42073980 (-)

Expression


Co-expression Network