ch25hl3


Basic Information

Item Value
gene id ch25hl3
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 7161301 ~ 7169700 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802066.1
AAATGGTTGTAGTTTGTAATTAACTGAATGCGACCATGAGGGGAATTATACATTTACCTACTGCTTGCGtcaacattaaaaaagaaattggaaAGAAATCGGATCTGGggctcctccccccccctccaccgTATAGTGAGAAAACCTGAGCAGGAACATCACCACTCGCCTCCAGGAAGAAGCGGAGGAAAACCACCTAACTTACCTTTCTTTCCCCTGAATATGTAGCCTAGGAGAGTTTATCCAGGACCGATCAAAGGGAAGTCATTTAAAATCACATGGGGATAATAGCGTTACAGTTGTCAAACAAACTGCTGCATTGTtgcaacatttttattattttgtaagaATTGGTGATACCCGCGCTAAAAGAAGATAGTAGACAGTAGATGGTGAGGGGCGAGTCGGGATGAGTGTGCCCTGCTCAGGGCATGGAGAGGCGGCGCCTCTCCTCCAGGGGCTGTGGGAGCGCGTGAGAGCGGGCCGGGAGGAAGTCCTGCTCTCCCCTTACCTGCCCGCGCTCTACGCCTTCGTGACGCACGTGCTGCTCTGCGCACCTTTCCTCGCGCTGGACGCGCTGGGAAGCGTCTGCCAGCGGGTCCGCTCGTGGAGGATCACCGCAGGCTCGGGTCCGCCGCCGCCTCTCCGCCGCTGGGTTGGCTGTTTTCGGAGGGTGCTGTACCGATACCTGACCACCGTCCTCCCCGCCACCGCGCTGTTTCACACGGTGCGGAGCCCCGCAGTGCCGGAGCTGGCTCCATCCTGCTGGCAGCTCTTCGTGGAAGTCTTTGCGTGTTTACTGCTGTTTGACACGCTCTTCTTTATGTGGCACGTCTGCATGCACAGGTTTCCCTGGCTCTACCGCAACATCCACCAGCTGCACCACCGGCACCACATCCCCTTTGCTCTGGCTGCCCAGGACAGTAACTCGGGCGAGCtgctgtctctgctgctgctggctctgAGCAGCGCCTGGGTGCTGGGCTGCCACCCGCTGAGCGAAGCCTTCTTCCACCTCATCAACAGCTGGCTGGCGGTGGAGGTCCACTGCGGCTATGACCTGCCCCTGGCTCTGCACAGGCTGCTGCCCGGTCTGGGAGGAGCCCGCTGCCACCAAGCCCACCATACTCTCCTCAGCGTCAACTACGCCCCCTACTTCACCCACTGGGACCTCCTCTTTGGCACATTCTGTGCTCCGGTGAAGCGTTCACATCCGGAGTGACAAAAACTGTTGCACATATGAAGTGTCTTCCCTAGGCTTGTAGAAGACTTATATTTTTTTTGGGAGCATCATCATTttcatatctgtgtctaaaaccttggaaaagctagagcaggtAATAACTAGCACTAAAGagcttaaccctcctgttgtccttgtccttgacctgttttcaaagtttacatGT

Function

NR:

description
PREDICTED: cholesterol 25-hydroxylase-like protein

GO:

id name namespace
GO:0006633 fatty acid biosynthetic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005506 iron ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802066.1 True 1409 mRNA 0.55 2 7161301 7169700

Neighbor

gene id symbol gene type direction distance location
hk2 LOC103369118,LOC106531304 coding downstream 219565 6895202 ~ 6941736 (-)
tbx1 tbx1 coding downstream 1099439 6048963 ~ 6061862 (-)
tango2 tango2 coding downstream 1494092 5643204 ~ 5667209 (-)
dgcr8 dgcr8,LOC102791485 coding downstream 1534916 5607031 ~ 5626385 (-)
ranbp1 ranbp1,LOC102791189 coding downstream 1566397 5590574 ~ 5594904 (-)
erlin2 LOC100709255,LOC101468631,LOC102303107,LOC102789125,LOC102208735 coding upstream 13113 7182813 ~ 7212011 (-)
LOC120561006 NA coding upstream 51141 7220841 ~ 7223583 (-)
znf703 znf703,LOC103397455 coding upstream 112716 7282416 ~ 7285425 (-)
LOC120560561 tia1 coding upstream 326811 7496511 ~ 7510835 (-)
trnag-ccc NA coding upstream 341521 7511221 ~ 7511291 (-)
G59756 NA non-coding downstream 12495 7101573 ~ 7148806 (-)
G59743 NA non-coding downstream 78088 7025606 ~ 7083213 (-)
G59734 NA non-coding downstream 131888 6976605 ~ 7029413 (-)
G59742 snrnp27,LOC102787093 non-coding downstream 134097 6997087 ~ 7027204 (-)
G59745 NA non-coding downstream 144477 7009700 ~ 7016824 (-)
LOC120560930 NA non-coding upstream 195732 7365432 ~ 7366200 (-)
LOC120560966 NA non-coding upstream 196557 7366257 ~ 7367921 (-)
G59802 NA non-coding upstream 254463 7424163 ~ 7424364 (-)
G59855 NA non-coding upstream 324188 7493888 ~ 7494179 (-)
G59876 NA non-coding upstream 405020 7574720 ~ 7575530 (-)
G59739 LOC102786375,LOC102210956 other downstream 164445 6991203 ~ 6996856 (-)
G59563 NA other downstream 637627 6522759 ~ 6523674 (-)
G59521 NA other downstream 734490 6426206 ~ 6426811 (-)
LOC120561494 NA other downstream 1569491 5589573 ~ 5591810 (-)
LOC120561493 NA other downstream 1694864 5466223 ~ 5466437 (-)
G59881 NA other upstream 414386 7584086 ~ 7584519 (-)
specc1la specc1l other upstream 557860 7727560 ~ 7766012 (-)
anapc7 anapc7 other upstream 707699 7877399 ~ 7887425 (-)
G60145 NA other upstream 1231322 8401022 ~ 8402566 (-)
tacr1a tacr1,LOC102799894,LOC100703444,LOC102196095 other upstream 1473703 8643403 ~ 8727443 (-)

Expression


Co-expression Network