isl1a (isl1,LOC103469637,LOC107374027,LOC107661270,LOC103141950,LOC102231175)


Basic Information

Item Value
gene id isl1a
gene name isl1,LOC103469637,LOC107374027,LOC107661270,LOC103141950,LOC102231175
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 4103017 ~ 4109223 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802069.1
CCGCTTGTCAGGATCAGAGCGCCACACATACCGGcaacacacactatacacacacactccctctccGAGCCGGACAGCACAGCCCCTGGCCCGGCAAGCCCCGGCAGCGGAGGACACATCCAGGCTTCCAGGCGCCGCAGCCCGCCGTGACAGTGGACCTAACATCGCCTTACTTTGTGGACATGGGAGACATGGGGGACCCGCCGAAAAAGAAGCGGCTGGTGTCTCTGTGCGTGGGCTGCGGGAACCAGATCCACGACCAGTACATCCTGCGGGTCTCCCCGGACCTGGAGTGGCACGCCGCCTGTCTCAAATGTGCCGAGTGCAGCCAGTACCTGGACGAGTCGTGCACGTGTTTCGTCAGGGACGGAAAGACGTACTGTAAACGGGACTACATCAGGTTGTACGGGATCAAATGCGCGAAATGCAACATTGGCTTCAGCAAGAACGACTTCGTGATGCGGGCCCGCTCCAAGGTCTACCACATCGAGTGTTTCCGCTGCGTGGCCTGCAGCCGGCAGCTCATCCCGGGGGACGAGTTCGCTCTGCGGGAGGACGGGCTCTTCTGCCGGGCCGACCACGACGTGGTGGAGCGGGCCAGCCTGGGCGCTGGAGACCCGCTCAGCCCGCTGCACCCCGCCAGACCGCTGCAGATGGCAGCAGAACCAATCTCGGCCCGGCAGCCCGCGCTTCGGCCTCACGTGCACAAACAGCCGGAGAAGACCACCCGGGTCCGGACGGTGCTGAACGAGAAGCAGCTGCACACGCTGCGGACTTGCTATAACGCCAACCCGAGGCCTGACGCCCTCATGAAGGAGCAGCTGGTGGAGATGACCGGCCTCAGCCCGCGGGTCATCCGGGTCTGGTTCCAGAACAAGCGGTGCAAGGACAAGAAGAGGAGCATCCTGAtgaagcagctgcagcagcaacagcccAACGACAAGACGAACATCCAGGGAATGACTGGCACCCCGATGGTGGCGGCCAGTCCGGAGCGGCACGACGGCGGCCTCCAGGCCAACCCGGTGGAGGTGCAGAGCTACCAGCCGCCCTGGAAGGTCCTCAGCGACTTCGCCCTGCAGAGCGACATCGACCAGCCGGCCTTCCAACAACTGGTCAGTTTCTCGGAGGGCGGTCCGGGATCGAACTCGACGGGCAGCGAGGTAGCGTCCATGTCGTCCCAGCTTCCAGACACGCCGAACAGCATGGTGTCCAGCCCCATCGAGGCCTgagccgccgccgccgccgccgccgacGCCGCATCCtccccatccatccatcccgaccgaccgaccgacggacggacggacggaccgCACCAAACAACCCCCCTGGTTGTATTATGACACTGTGAAGACAATCATGGGATTTTACCACAGCCACACATTCTAATGTCCatccagagagagacacacggaCGGACGGATGCGTCATCATGGCCCGGTGCTGCACGTTCGAGCGCCTGGTTACAGTTGCCAAAACGAGAGACACGAACCGGACTGCATCGATAC
>XM_039802070.1
CGCTTGTCAGGATCAGAGCGCCACACATACCGGcaacacacactatacacacacactccctctccGAGCCGGACAGCACAGCCCCTGGCCCGGCAAGCCCCGGCAGCGGAGGACACATCCAGGCTTCCAGGCGCCGCAGCCCGCCGTGACAGTGGACCTAACATCGCCTTACTTTGTGGACATGGGAGACATGGGGGACCCGCCGAAAAAGAAGCGGCTGGTGTCTCTGTGCGTGGGCTGCGGGAACCAGATCCACGACCAGTACATCCTGCGGGTCTCCCCGGACCTGGAGTGGCACGCCGCCTGTCTCAAATGTGCCGAGTGCAGCCAGTACCTGGACGAGTCGTGCACGTGTTTCGTCAGGGACGGAAAGACGTACTGTAAACGGGACTACATCAGGTTGTACGGGATCAAATGCGCGAAATGCAACATTGGCTTCAGCAAGAACGACTTCGTGATGCGGGCCCGCTCCAAGGTCTACCACATCGAGTGTTTCCGCTGCGTGGCCTGCAGCCGGCAGCTCATCCCGGGGGACGAGTTCGCTCTGCGGGAGGACGGGCTCTTCTGCCGGGCCGACCACGACGTGGTGGAGCGGGCCAGCCTGGGCGCTGGAGACCCGCTCAGCCCGCTGCACCCCGCCAGACCGCTGCAGATGGCAGAACCAATCTCGGCCCGGCAGCCCGCGCTTCGGCCTCACGTGCACAAACAGCCGGAGAAGACCACCCGGGTCCGGACGGTGCTGAACGAGAAGCAGCTGCACACGCTGCGGACTTGCTATAACGCCAACCCGAGGCCTGACGCCCTCATGAAGGAGCAGCTGGTGGAGATGACCGGCCTCAGCCCGCGGGTCATCCGGGTCTGGTTCCAGAACAAGCGGTGCAAGGACAAGAAGAGGAGCATCCTGAtgaagcagctgcagcagcaacagcccAACGACAAGACGAACATCCAGGGAATGACTGGCACCCCGATGGTGGCGGCCAGTCCGGAGCGGCACGACGGCGGCCTCCAGGCCAACCCGGTGGAGGTGCAGAGCTACCAGCCGCCCTGGAAGGTCCTCAGCGACTTCGCCCTGCAGAGCGACATCGACCAGCCGGCCTTCCAACAACTGGTCAGTTTCTCGGAGGGCGGTCCGGGATCGAACTCGACGGGCAGCGAGGTAGCGTCCATGTCGTCCCAGCTTCCAGACACGCCGAACAGCATGGTGTCCAGCCCCATCGAGGCCTgagccgccgccgccgccgccgccgacGCCGCATCCtccccatccatccatcccgaccgaccgaccgacggacggacggacggaccgCACCAAACAACCCCCCTGGTTGTATTATGACACTGTGAAGACAATCATGGGATTTTACCACAGCCACACATTCTAATGTCCatccagagagagacacacggaCGGACGGATGCGTCATCATGGCCCGGTGCTGCACGTTCGAGCGCCTGGTTACAGTTGCCAAAACGAGAGACACGAACCGGACTGCATCGATAC

Function

symbol description
isl1 Enables DNA-binding transcription factor activity, RNA polymerase II-specific; DNA-binding transcription factor binding activity; and cis-regulatory region sequence-specific DNA binding activity. Involved in cardiac cell fate determination; positive regulation of transcription by RNA polymerase II; and secondary heart field specification. Predicted to be part of chromatin. Predicted to be active in nucleus. Implicated in type 1 diabetes mellitus and type 2 diabetes mellitus.

NR:

description
PREDICTED: insulin gene enhancer protein ISL-1

GO:

id name namespace
GO:0021522 spinal cord motor neuron differentiation biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0055011 atrial cardiac muscle cell differentiation biological_process
GO:0055012 ventricular cardiac muscle cell differentiation biological_process
GO:0031017 exocrine pancreas development biological_process
GO:0008016 regulation of heart contraction biological_process
GO:0048665 neuron fate specification biological_process
GO:0048936 peripheral nervous system neuron axonogenesis biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K09370 ISL1; insulin gene enhancer protein ISL-1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802069.1 True 1511 mRNA 0.63 6 4103017 4109223
XM_039802070.1 False 1507 mRNA 0.63 6 4103017 4109222

Neighbor

gene id symbol gene type direction distance location
ak6 ak6 coding downstream 254507 3844642 ~ 3848510 (-)
ydjc ydjc coding downstream 258977 3830346 ~ 3844040 (-)
pias2 pias2 coding downstream 286197 3799032 ~ 3816820 (-)
ptar1 ptar1 coding downstream 481537 3606395 ~ 3621480 (-)
apba1a apba1 coding downstream 499859 3555073 ~ 3603158 (-)
LOC120560167 NA coding upstream 352206 4461429 ~ 4471480 (-)
pnpla7b pnpla7 coding upstream 368052 4477275 ~ 4529746 (-)
dph7 dph7 coding upstream 422745 4531968 ~ 4543886 (-)
LOC120559971 NA coding upstream 529881 4639104 ~ 4642738 (-)
si:ch211-158d24.2 megf9,LOC102787576 coding upstream 535381 4644604 ~ 4695210 (-)
LOC120560054 NA non-coding downstream 103 4099798 ~ 4102914 (-)
LOC120560115 NA non-coding downstream 110073 3985628 ~ 3992944 (-)
G59039 NA non-coding downstream 206292 3895712 ~ 3896725 (-)
G59029 NA non-coding downstream 236929 3861844 ~ 3866088 (-)
G58995 LOC104961333,LOC107396654,LOC101067868,LOC102226353,LOC108248341,LOC107088009 non-coding downstream 275591 3818433 ~ 3827426 (-)
G59098 NA non-coding upstream 74130 4183353 ~ 4183917 (-)
G59101 NA non-coding upstream 78038 4187261 ~ 4187472 (-)
G59197 NA non-coding upstream 304536 4413759 ~ 4413981 (-)
G59207 NA non-coding upstream 345467 4454690 ~ 4461071 (-)
LOC120560046 LOC103358197 non-coding upstream 439502 4548725 ~ 4557613 (-)
G58994 NA other downstream 413679 3688629 ~ 3689338 (-)
G58920 LOC106099046,LOC107687292,LOC107712180,LOC107663003 other downstream 686163 3415627 ~ 3416854 (-)
G58919 NA other downstream 705521 3397169 ~ 3397496 (-)
si:ch211-102c2.4 NA other downstream 862954 3232606 ~ 3240063 (-)
tnc tnc,LOC104930867,LOC103356464 other downstream 968468 3049669 ~ 3134549 (-)
golph3a golph3,LOC103397487,LOC108249570 other upstream 100525 4209748 ~ 4224568 (-)
sub1b sub1 other upstream 314926 4424149 ~ 4430090 (-)
LOC120560375 NA other upstream 323621 4432844 ~ 4436316 (-)
LOC120561493 NA other upstream 1357000 5466223 ~ 5466437 (-)
LOC120561494 NA other upstream 1480350 5589573 ~ 5591810 (-)

Expression


Co-expression Network