LOC120559995


Basic Information

Item Value
gene id LOC120559995
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 27422537 ~ 27428690 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802078.1
TAAATTACAGGAGTCTGTCACCACACCCAGACCACAGGATTAAGCCCATTGGTTTTCAGTTTGTCTGCGCCAGGAGAGGCATCGCCTGCCCCCTTCATCAAATAGTTATTTTGACAAATCGGAAGCGTCTCTAATCCACATCTACCTGCGCGCCCACCGAGCCTCCTGTCAGCGACCTGTCGGCTCTGAAATGGGGAACAGCAAACCTTCAGCGCTCCTCTCACTTATCGGTGTCATGCTGCTCTGGCCGTATGTTCTCACCAAGAGCGTCTCATCCAGACTGCAGACTGCAGACAGCACCTCTCTATCTGCCGGGCACGGGGAAGAGCGCCCTCATGTGGTGAAGCGGTCAATACAGAACTGCGACAGCACTTTTGACAGCTATTGCCTGAACAACGGCCAGTGCATGCTGCTGGTGGACATCAATGAACACCACTGCAAGTGTGGGAGGGGCTTCTACGGCCCCAGGTGTAGCAACCCGGAGCTCCTTGTTAAGCCAATGGGAGAAGAGCAGATAATTGTCACCATTTTCTGTGTGACTCTGCTGATTATAGGTCTGGCTGGAGCTCTGTACTTCTGCTGCAAATGgtataagaaaaacagaatccCATGTCAGCAGAAGCATCAGGGTTACAAAGGAGTCCAGACAGCTTAGACGCACACCCACTGCATCCGTCGCTGGAAAAGACAAACCAGGATTCTGAAAAGATGATTTCAACATACCATGACGTTACCTGACATGCTTACACTCAGTGGCTGGTTAACTGGATGTCACACAGCTTTGGATCACTTTATCAAGCAGGCAAATTGGCACAaagagataaaaacaaaaaacagctttGAGCGTGGTGCGATTGTTGTTTCTAGCTGCACTGGTTCTTATGTTACAGCACCTGCTGCCCTCATGTTTGAAAAGATGAATGgtgagacacacaaagacagtttCTATGGGTGACGATGATGGTGGGTAATGGAAAATTCATGGAGAAATGTGAAAGTCTAAACAAATATTAGGGGTAAGCGACTGTCAAACATTTCTAACCCCTTGCGATCCAGGGGCTGTAAAACAAAGTCAACCAAATTGCATGCTTTTTAAAAACGGCAATAATACACAGCTTAGCTGACAGTAACGTGCAGTACATTATAATGATCATTACCAAAGCAGTCATGCTGTGTGTTACACCCTCTTTGTTGCCAGTAAATGTGagattcatttaaaatttttagAGAGCAAATTTTTCAGGTTTGGCGAGGTTGCAGATCTCGTCACATCTTTTAAATCAGCCTCAGAGATCAAAGCATAAAACTTATTGATCATAAAGTGTTAACCATCTAGCTGCCTTCTGACTGCCTACAGTACAGTTCTGCACTTTTTCTTAATAGTTTTTAATTTATCTCTAACACTTTTGCCTGGTTTAGCTTGTATTTATTGTTGGGGTTTTTTGCCTTTTGTAGCTATTATGAATAGTAAAAATAGCCATTACTGTCATTAAAGTGGCCACTGAGTGTAATagttctgtgttttatttgaatcTTTGTTAAGTCAgaaagtattttcattttgataATTTATTATAAAGTATTAATGTATA

Function

GO: NA

KEGG:

id description
K09784 EREG; epiregulin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802078.1 True 1592 mRNA 0.43 5 27422537 27428690

Neighbor

gene id symbol gene type direction distance location
LOC120560091 NA coding upstream 1820 27418709 ~ 27420717 (+)
mthfd2l mthfd2l,LOC102288655,LOC100709995 coding upstream 5333 27394417 ~ 27417204 (+)
LOC120560992 LOC106926053,LOC103469987,LOC103145901,LOC108233650,LOC105928392,LOC106519893 coding upstream 97707 27309200 ~ 27324830 (+)
snx18a snx18 coding upstream 229018 27179360 ~ 27193519 (+)
fsta fst coding upstream 411216 27005139 ~ 27011321 (+)
areg NA coding downstream 5305 27433995 ~ 27442196 (+)
gpx8 gpx8,LOC102796953 coding downstream 41566 27470256 ~ 27472819 (+)
tut7 LOC104960608 coding downstream 57012 27485702 ~ 27509635 (+)
isca1 isca1 coding downstream 81736 27510426 ~ 27516589 (+)
LOC120560745 NA coding downstream 88100 27516790 ~ 27520440 (+)
G65108 NA non-coding upstream 32675 27389457 ~ 27389862 (+)
G65106 NA non-coding upstream 43322 27378998 ~ 27379215 (+)
G65083 NA non-coding upstream 222347 27199949 ~ 27200190 (+)
LOC120560738 NA non-coding upstream 522979 26897902 ~ 26899558 (+)
G64967 ykt6 non-coding upstream 526394 26893701 ~ 26896143 (+)
G65171 NA non-coding downstream 48058 27476748 ~ 27476966 (+)
G65272 NA non-coding downstream 474385 27903075 ~ 27904933 (+)
G65314 NA non-coding downstream 573849 28002539 ~ 28005121 (+)
G65362 NA non-coding downstream 942766 28371456 ~ 28371841 (+)
G65378 NA non-coding downstream 1033935 28462625 ~ 28463104 (+)
G65084 lipg other upstream 51578 27205234 ~ 27370959 (+)
ndufs4 ndufs4 other upstream 382938 27012210 ~ 27039599 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other upstream 760642 26644661 ~ 26661895 (+)
cltcl1 LOC100691387,LOC103359525 other upstream 778370 26614237 ~ 26644167 (+)
c6h22orf39 clg12h22orf39 other upstream 925550 26494284 ~ 26496987 (+)
mboat4 NA other downstream 1416936 28845626 ~ 28849471 (+)
ubac1 ubac1 other downstream 1915890 29344580 ~ 29351756 (+)
fbxo21 fbxo21 other downstream 2758158 30186848 ~ 30212108 (+)
LOC120560820 NA other downstream 2818197 30246887 ~ 30251519 (+)
G65899 taok3 other downstream 3145396 30574086 ~ 30578159 (+)

Expression


Co-expression Network