LOC120559998


Basic Information

Item Value
gene id LOC120559998
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 13963143 ~ 13972136 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802083.1
GCTAAGAAGTCGGGCTGCTTCAAAATCAACAACTGCAAGTGTATCATGAAGGATGGGAGCGGGGTGATAAACCTGAACGCTATGGGAGATGCCGAGGGTTTCCTGGGGCAGTTGAAGCCTGTGTCAGCAGAGAACATGTCAGTCAGTGCAGAAATCCTCCTGTCCTTCAGCCCCTGCCAGCCCTTCTCACAGCCAGAGGACCTGACAGGAGCTGACTGTACCAACGTCGCTGCATGTCTCTTTGTCAGGTATCACAGGCTCAACAGATACATTAGCCACTATATCAGCTATGGAAGACATGAAGGGAATGAATTCCACTACAATGACACCCTGAAGATGCTGTCTGTCTCATACTTTGTTCATGCCGGGCAGCCGCTGACAGTAGTGCATTACTACTGCAATCCAAACCAGTCCACGTCTTTGATCCGGGACCAGAAACTCCGCACTGGGGAGCCCTTGCAGATCTGGGTGGAGAGCCCCTGTGCCTGTCCAAATGCCTGTGCCATGGGAGATCTGGGTCTAGGCACCATCTTCCTCATCATCCTCTCCCTCAGTGCAGCTGCATACTTCATCCTTGGATCCTGTGCTCTCAGGCCTTTTCGGAGCAGCAGTGGAGTCCAGATCTCTCCAGAGCACAGTGTGTGGTGTATGATCTGCTACCTCTGTACTGAGAGTAGGCCAGCAAGAAGACACTATACAGAGACGACACAGTGAACGATAAGCAGCTGCGCGTCTCTGGGGCACTGCAAAGTGTCTCAACATGTCACGTGTTTTGACCTGAAGATGTCATCATGTCCCATGGAGGGCCAAGAGTCAGcatggttttgttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802083.1 True 832 mRNA 0.52 4 13963143 13972136

Neighbor

gene id symbol gene type direction distance location
nr6a1a nr6a1 coding downstream 98703 13740353 ~ 13864440 (-)
LOC120561314 nr5a1,sf-1 coding downstream 276237 13649892 ~ 13686906 (-)
LOC120561257 NA coding downstream 868647 13084483 ~ 13094496 (-)
LOC120560514 LOC107752212,LOC107675959,LOC107679452 coding downstream 902350 13059490 ~ 13060793 (-)
LOC120561259 NA coding downstream 924696 13036828 ~ 13038447 (-)
htr7c htr7,LOC104934772,LOC100705941,LOC102292089 coding upstream 135267 14107403 ~ 14142258 (-)
LOC120560956 LOC103141353,LOC103469718,LOC100701549,LOC106929229 coding upstream 274347 14246483 ~ 14248811 (-)
LOC120560399 LOC103369226,LOC100702093 coding upstream 283561 14255697 ~ 14260239 (-)
LOC120560975 pxn,LOC102314602,LOC102784766,LOC102212913,LOC101475765 coding upstream 316866 14289002 ~ 14312345 (-)
ctu1 ctu1 coding upstream 342458 14314594 ~ 14317390 (-)
G61304 NA non-coding downstream 106372 13856241 ~ 13856771 (-)
G61302 NA non-coding downstream 143415 13819510 ~ 13819728 (-)
G61301 NA non-coding downstream 145620 13816900 ~ 13817523 (-)
G61274 NA non-coding downstream 283690 13679239 ~ 13679453 (-)
G61273 NA non-coding downstream 293074 13669821 ~ 13670069 (-)
G61328 NA non-coding upstream 41200 14013336 ~ 14013562 (-)
G61334 NA non-coding upstream 109191 14081327 ~ 14081555 (-)
G61335 NA non-coding upstream 118339 14090475 ~ 14090750 (-)
G61359 rtili,piwil2 non-coding upstream 205187 14177323 ~ 14178170 (-)
G61404 tnks non-coding upstream 247211 14219347 ~ 14233438 (-)
G61264 NA other downstream 373811 13589039 ~ 13589332 (-)
LOC120561038 LOC102778062,LOC101486272,LOC102199534,LOC108245630 other downstream 1407858 12293707 ~ 12555285 (-)
LOC120561001 whrn,LOC102797690 other downstream 1901497 11901650 ~ 12061646 (-)
abca2 abca2 other downstream 2369483 11285385 ~ 11593660 (-)
G60715 NA other downstream 2773402 11189142 ~ 11189741 (-)
si:ch73-138n13.1 LOC102794857,LOC107084631 other upstream 356015 14328151 ~ 14364326 (-)
trnaa-agc_14 NA other upstream 966839 14938975 ~ 14939047 (-)
trnaa-agc_15 NA other upstream 972360 14944496 ~ 14944568 (-)
trnae-cuc_15 NA other upstream 976623 14948759 ~ 14948830 (-)
trnas-gcu NA other upstream 979366 14951502 ~ 14951583 (-)

Expression


Co-expression Network