ccdc125


Basic Information

Item Value
gene id ccdc125
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 3869033 ~ 3889655 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802089.1
ACAGGAAGTGATTCACCTAGCAGCCTTTCTATTAGTATGCGAAAGCTGGCGATAGTAACCGTTGACCGTAAATatgaatattaacagtctatggtagtAACACTGGGATTCATCTTTACTAAGCGTTGTGTTTGTCCGTGTATCGCTGGAGGCGGGAAAGCACCAAGGAATATCGCGCTACTGCTTCAAAGTTCCAGATGCAGGAGACCAGTGAGGCCCGCAGCCTGGATGATGATATGGTGGAGGGAGACCTGGGGGACGGGATGGGAGTCAAAGCAGCACCCAACTCCACCAGGAAGAAGAGCCAAAGCTTTGTAGGACTCACAGAGACGCTGCTGTCCCGAACAGAGCCGGGAGAGGCGGCCTGGATCCCCGGACTGAAGACTgcagagacacagcagcagagagcccgCTGGAAGCTGCCACTCTCCGCAGGCACCCTGGTTGACCTGTCAAAAGACGAGCTGAAAGACCGACTACAGGAAGCCACTGagGTGATAGACGTTTTATGCTGTGAGCTGGAGGTGGCACATCGGTACCTTGAAGGCAAATACGAAGCTCTGAAGATCTTACAGGGGAAGGCCATTCTTGACAAAGCCACGAGTCACACTAAAAGTCTGCTGCAGAAAAGTGAGGCGAGGGCCAAAGCTCTGGAGAAGGAGGCGAACAGCTTGCAGTGGGAACTCAGCTTCATCCAGGTCCAGATGAAGAAGTCTCAACAATCCTGGGAGCAGAAATACAACAGAATTTGGAGTGAGAACAAGACTCTGACCGACAaactggaggagagagagagagagatccagaaGCTCCGGGCAGAACATTCCActcTTAGTCGGCAGTGCGTGGAGCTTCTCTCCATGCTGAGTGTGAAGGAGCAGAGAACTTACCAAGAAACCAAACCTCACTACAGCCCAGAGAGAGACGCAAGTCTTCTGGAGctggcagttttgggggcgTGCCGGTGTCTCGGTGCTGCTGACGCGTGTCTGTGCAGTCGTGCCGCGGCTGGCAGCAGGAAGCAGCTGGTCCAGCTCCAACAGGAGctgGATGCACAGCGTCTGAAGAGAGAGGAGGCGTGGATGGTCGCCGATGCTTTTCGCATCGCCTTTGAACAGCAGCTGAGGAAACGGAGTGAGCACTTCCTCCTGCTGGCTGAAGCCAACATCCTGAAGTCTAATCAGGGCAAAGCTGAAGgTGCTAACAGCAGTCCTTTAATCAGTGTAAGCCAGAGGTTGAGAGGATTGCTGCCATCCAAGATGCCTGAGACTGAGACCGAGACTGAGACTGAGACTCTCTACCGACTGCTGGACTTGCTGAATGACAAGGAGGAGGCCCTGGCCCACCAGAGGAAGGTGAGCATCATGTTAGCCCACAGTGCAGACGAGCTACAGAGACAGTTGCATCTGGATTCACATTGCCGGCCAGCAGACCCATCAGAGAACCAGAACCAGCAAAGTTCTAATACATCAGAGTCGAAGATACAAGCCCAAGTCTCATCAGAGTCCAACATCCATGCACAGCAACAGCTGCCAGATTCCCAGCATCAGCCGGGACACCCAGCGCGTCTGTCAGAGTCCAGGACTGAACCACAGGAGCTGTCAGACCCATCGCCGTCCAACAGCCAGCCACAGTCCAACCACAAAAACCACAAGTCTGAAATCCAAAAATCCGACCAACCAGAGTCCTGATCCAGACAGCAGACTCCTGTCTCAGACAGAGACGCAGCAGTCAGGGTATTCTAAAATAGGAGGACGTGGTTTTGGCATACACCACCTGGCTCAATGCAAACGCCTAGTtcaaaaaaagacaatgttgtGCACATCCATGTAGTTGCTGatgcatgacaaaaaaaaagaatgttcaAAGAAAAGTGAGTGAAGTCCA
>XM_039802090.1
ACAGGAAGTGATTCACCTAGCAGCCTTTCTATTAGTATGCGAAAGCTGGCGATAGTAACCGTTGACCGTAAATatgaatattaacagtctatggtagtAACACTGGGATTCATCTTTACTAAGCGTTGTGTTTGTCCGTGTATCGCTGGAGGCGGGAAAGCACCAAGGAATATCGCGCTACTGCTTCAAAGTTCCAGTTTGATGGGTGCAGATGCAGGAGACCAGTGAGGCCCGCAGCCTGGATGATGATATGGTGGAGGGAGACCTGGGGGACGGGATGGGAGTCAAAGCAGCACCCAACTCCACCAGGAAGAAGAGCCAAAGCTTTGTAGGACTCACAGAGACGCTGCTGTCCCGAACAGAGCCGGGAGAGGCGGCCTGGATCCCCGGACTGAAGACTgcagagacacagcagcagagagcccgCTGGAAGCTGCCACTCTCCGCAGGCACCCTGGTTGACCTGTCAAAAGACGAGCTGAAAGACCGACTACAGGAAGCCACTGagGTGATAGACGTTTTATGCTGTGAGCTGGAGGTGGCACATCGGTACCTTGAAGGCAAATACGAAGCTCTGAAGATCTTACAGGGGAAGGCCATTCTTGACAAAGCCACGAGTCACACTAAAAGTCTGCTGCAGAAAAGTGAGGCGAGGGCCAAAGCTCTGGAGAAGGAGGCGAACAGCTTGCAGTGGGAACTCAGCTTCATCCAGGTCCAGATGAAGAAGTCTCAACAATCCTGGGAGCAGAAATACAACAGAATTTGGAGTGAGAACAAGACTCTGACCGACAaactggaggagagagagagagagatccagaaGCTCCGGGCAGAACATTCCActcTTAGTCGGCAGTGCGTGGAGCTTCTCTCCATGCTGAGTGTGAAGGAGCAGAGAACTTACCAAGAAACCAAACCTCACTACAGCCCAGAGAGAGACGCAAGTCTTCTGGAGctggcagttttgggggcgTGCCGGTGTCTCGGTGCTGCTGACGCGTGTCTGTGCAGTCGTGCCGCGGCTGGCAGCAGGAAGCAGCTGGTCCAGCTCCAACAGGAGctgGATGCACAGCGTCTGAAGAGAGAGGAGGCGTGGATGGTCGCCGATGCTTTTCGCATCGCCTTTGAACAGCAGCTGAGGAAACGGAGTGAGCACTTCCTCCTGCTGGCTGAAGCCAACATCCTGAAGTCTAATCAGGGCAAAGCTGAAGgTGCTAACAGCAGTCCTTTAATCAGTGTAAGCCAGAGGTTGAGAGGATTGCTGCCATCCAAGATGCCTGAGACTGAGACCGAGACTGAGACTGAGACTCTCTACCGACTGCTGGACTTGCTGAATGACAAGGAGGAGGCCCTGGCCCACCAGAGGAAGGTGAGCATCATGTTAGCCCACAGTGCAGACGAGCTACAGAGACAGTTGCATCTGGATTCACATTGCCGGCCAGCAGACCCATCAGAGAACCAGAACCAGCAAAGTTCTAATACATCAGAGTCGAAGATACAAGCCCAAGTCTCATCAGAGTCCAACATCCATGCACAGCAACAGCTGCCAGATTCCCAGCATCAGCCGGGACACCCAGCGCGTCTGTCAGAGTCCAGGACTGAACCACAGGAGCTGTCAGACCCATCGCCGTCCAACAGCCAGCCACAGTCCAACCACAAAAACCACAAGTCTGAAATCCAAAAATCCGACCAACCAGAGTCCTGATCCAGACAGCAGACTCCTGTCTCAGACAGAGACGCAGCAGTCAGGGTATTCTAAAATAGGAGGACGTGGTTTTGGCATACACCACCTGGCTCAATGCAAACGCCTAGTtcaaaaaaagacaatgttgtGCACATCCATGTAGTTGCTGatgcatgacaaaaaaaaagaatgttcaAAGAAAAGTGAGTGAAGTCCA
>XM_039802091.1
ACAGGAAGTGATTCACCTAGCAGCCTTTCTATTAGTATGCGAAAGCTGGCGATAGTAACCGTTGACCGTAAATatgaatattaacagtctatggtagtAACACTGGGATTCATCTTTACTAAGCGTTGTGTTTGTCCGTGTATCGCTGGAGGCGGGAAAGCACCAAGGAATATCGCGCTACTGCTTCAAAGTTCCAGATGCAGGAGACCAGTGAGGCCCGCAGCCTGGATGATGATATGGTGGAGGGAGACCTGGGGGACGGGATGGGAGTCAAAGCAGCACCCAACTCCACCAGGAAGAAGAGCCAAAGCTTTGTAGGACTCACAGAGACGCTGCTGTCCCGAACAGAGCCGGGAGAGGCGGCCTGGATCCCCGGACTGAAGACTgcagagacacagcagcagagagcccgCTGGAAGCTGCCACTCTCCGGCACCCTGGTTGACCTGTCAAAAGACGAGCTGAAAGACCGACTACAGGAAGCCACTGagGTGATAGACGTTTTATGCTGTGAGCTGGAGGTGGCACATCGGTACCTTGAAGGCAAATACGAAGCTCTGAAGATCTTACAGGGGAAGGCCATTCTTGACAAAGCCACGAGTCACACTAAAAGTCTGCTGCAGAAAAGTGAGGCGAGGGCCAAAGCTCTGGAGAAGGAGGCGAACAGCTTGCAGTGGGAACTCAGCTTCATCCAGGTCCAGATGAAGAAGTCTCAACAATCCTGGGAGCAGAAATACAACAGAATTTGGAGTGAGAACAAGACTCTGACCGACAaactggaggagagagagagagagatccagaaGCTCCGGGCAGAACATTCCActcTTAGTCGGCAGTGCGTGGAGCTTCTCTCCATGCTGAGTGTGAAGGAGCAGAGAACTTACCAAGAAACCAAACCTCACTACAGCCCAGAGAGAGACGCAAGTCTTCTGGAGctggcagttttgggggcgTGCCGGTGTCTCGGTGCTGCTGACGCGTGTCTGTGCAGTCGTGCCGCGGCTGGCAGCAGGAAGCAGCTGGTCCAGCTCCAACAGGAGctgGATGCACAGCGTCTGAAGAGAGAGGAGGCGTGGATGGTCGCCGATGCTTTTCGCATCGCCTTTGAACAGCAGCTGAGGAAACGGAGTGAGCACTTCCTCCTGCTGGCTGAAGCCAACATCCTGAAGTCTAATCAGGGCAAAGCTGAAGgTGCTAACAGCAGTCCTTTAATCAGTGTAAGCCAGAGGTTGAGAGGATTGCTGCCATCCAAGATGCCTGAGACTGAGACCGAGACTGAGACTGAGACTCTCTACCGACTGCTGGACTTGCTGAATGACAAGGAGGAGGCCCTGGCCCACCAGAGGAAGGTGAGCATCATGTTAGCCCACAGTGCAGACGAGCTACAGAGACAGTTGCATCTGGATTCACATTGCCGGCCAGCAGACCCATCAGAGAACCAGAACCAGCAAAGTTCTAATACATCAGAGTCGAAGATACAAGCCCAAGTCTCATCAGAGTCCAACATCCATGCACAGCAACAGCTGCCAGATTCCCAGCATCAGCCGGGACACCCAGCGCGTCTGTCAGAGTCCAGGACTGAACCACAGGAGCTGTCAGACCCATCGCCGTCCAACAGCCAGCCACAGTCCAACCACAAAAACCACAAGTCTGAAATCCAAAAATCCGACCAACCAGAGTCCTGATCCAGACAGCAGACTCCTGTCTCAGACAGAGACGCAGCAGTCAGGGTATTCTAAAATAGGAGGACGTGGTTTTGGCATACACCACCTGGCTCAATGCAAACGCCTAGTtcaaaaaaagacaatgttgtGCACATCCATGTAGTTGCTGatgcatgacaaaaaaaaagaatgttcaAAGAAAAGTGAGTGAAGTCCA

Function

NR:

description
coiled-coil domain-containing protein 125

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802089.1 False 1887 mRNA 0.52 12 3869033 3889655
XM_039802090.1 True 1901 mRNA 0.52 12 3869033 3889655
XM_039802091.1 False 1884 mRNA 0.52 12 3869033 3889655

Neighbor

gene id symbol gene type direction distance location
rad17 rad17,LOC102794325 coding upstream 457 3848479 ~ 3868576 (+)
LOC120561175 ube2l3,LOC106562742,LOC104961333,LOC107396654,LOC102226353,LOC107088009,LOC108248341 coding upstream 41606 3818322 ~ 3827427 (+)
arid3c LOC103046366,LOC105901092,LOC107676636,LOC107552548,LOC108438346 coding upstream 93360 3688045 ~ 3775673 (+)
mamdc2a mamdc2 coding upstream 193808 3630736 ~ 3675225 (+)
fam189a2 LOC104953220 coding upstream 321700 3525307 ~ 3547333 (+)
si:dkey-3h3.3 NA coding downstream 309868 4199523 ~ 4208499 (+)
LOC120560812 thg1l,LOC106912903,LOC103154062 coding downstream 336381 4226036 ~ 4227032 (+)
pdzd2 LOC102293871 coding downstream 381849 4271504 ~ 4343670 (+)
npr3 npr3 coding downstream 467439 4357094 ~ 4388795 (+)
araf araf,LOC103397571 coding downstream 547878 4437533 ~ 4456244 (+)
LOC120561177 NA non-coding upstream 31354 3837307 ~ 3837679 (+)
G58986 NA non-coding upstream 65936 3799038 ~ 3803097 (+)
G58948 NA non-coding upstream 262724 3606062 ~ 3606309 (+)
G58944 NA non-coding upstream 312854 3547808 ~ 3556179 (+)
G58941 NA non-coding upstream 345412 3522846 ~ 3523621 (+)
G59033 NA non-coding downstream 1390 3891045 ~ 3891853 (+)
G59032 NA non-coding downstream 6015 3895670 ~ 3896241 (+)
G59042 NA non-coding downstream 71405 3961060 ~ 3961319 (+)
G59093 NA non-coding downstream 243193 4132848 ~ 4133064 (+)
G59132 NA non-coding downstream 418264 4307919 ~ 4329460 (+)
LOC120560521 tjp2 other upstream 346277 3435165 ~ 3522756 (+)
lman2lb NA other upstream 985172 2878374 ~ 2883861 (+)
dock5 dock5 other upstream 1556368 2273678 ~ 2312665 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 3031172 789405 ~ 837861 (+)
LOC120560799 NA other upstream 3656650 210742 ~ 212383 (+)
G59086 NA other downstream 227624 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 534486 4424141 ~ 4429981 (+)
trnal-aag_1 NA other downstream 542516 4432171 ~ 4432253 (+)
trnaq-uug_2 NA other downstream 543013 4432668 ~ 4432739 (+)
mrpl41 mrpl41 other downstream 640399 4530054 ~ 4531165 (+)

Expression


Co-expression Network