myl2b (myl2,LOC101478915,LOC103358995,LOC104927948)


Basic Information

Item Value
gene id myl2b
gene name myl2,LOC101478915,LOC103358995,LOC104927948
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 7932971 ~ 7939104 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802092.1
AGGGGTCAGTATATCTACCCCCTTTGTGTTCAGCTTCATCATAAAGCAGCCGGGATACTGCTTGGTCCTCATCAGCTATATACCACTGAAACATGTCACCCAAGAAGGCAAAGAAGAGATCCGACGGAGCCGGCTCCAATGTGTTCTCCATGTTTGAACAGGCCCAGATCCAGGAGTTCAAAGAAGCTTTTACTATCATGGATCAAAACCGAGACGGTTTCATTGACAAGAATGACCTGAGAGACACTTTTGCAGCTTTAGGCCGTTTAAATGTCAAGCAAGAAGAGATTGATGAGATGCTGACGGAGGCCCCAGGACCGGTTAATTTCACGGTCTTTCTCACCATGTTTGGAGAAAAACTAAAAGGTGCTGACCCGGAGGAGACCATCCTCAACGCTTTCAAAGTCTTTGATCCTGATGGGAAGGGAACGTTAAAGAAAGACTTTGTGACAGAGATGCTGACGACCCAGGCAGACAGGTTCACCCCTGAAGAGATGGAACAGATGTTTGCCGCCTTCCCACCAGATGTAGCAGGAAACCTAGACTACAACAATCTGGTCCACGTCATCACACACGGTGAAGAGAAGGACCAAGAATAGACGATTCCTGAGCTTGCGCTCTAGGTCATACACCTAGAGTCATAGCACAATAGGTCACatttgtgccaaaatatcaCACAAACTACAGCggaaatattttatatttcacaTTCATTCAAATAAATGACATTATTTTTGCATGAATGTATCAATTCCGTATTCATTGTAGTGTGTGTATACCACACTGTGTACATGTGATCTCTTGATATGTCATGGGTGAAATAAAGATCTATGAGCTCACAGAAAA
>XM_039802093.1
TTATAGACCATAAGCATGCCCCATTATGTGGGGAGAGGGGTCAGTATATCTACCCCCTTTGTGTTCAGCTTCATCATAAAGCAGCCGGGATACTGCTTGGTCCTCATCAGCTATATACCACTGAAACATGGCCGTTTAAATGTCAAGCAAGAAGAGATTGATGAGATGCTGACGGAGGCCCCAGGACCGGTTAATTTCACGGTCTTTCTCACCATGTTTGGAGAAAAACTAAAAGGTGCTGACCCGGAGGAGACCATCCTCAACGCTTTCAAAGTCTTTGATCCTGATGGGAAGGGAACGTTAAAGAAAGACTTTGTGACAGAGATGCTGACGACCCAGGCAGACAGGTTCACCCCTGAAGAGATGGAACAGATGTTTGCCGCCTTCCCACCAGATGTAGCAGGAAACCTAGACTACAACAATCTGGTCCACGTCATCACACACGGTGAAGAGAAGGACCAAGAATAGACGATTCCTGAGCTTGCGCTCTAGGTCATACACCTAGAGTCATAGCACAATAGGTCACatttgtgccaaaatatcaCACAAACTACAGCggaaatattttatatttcacaTTCATTCAAATAAATGACATTATTTTTGCATGAATGTATCAATTCCGTATTCATTGTAGTGTGTGTATACCACACTGTGTACATGTGATCTCTTGATATGTCATGGGTGAAATAAAGATCTATGAGCTCACAGAAAA

Function

symbol description
myl2 Enables actin monomer binding activity and calcium ion binding activity. Involved in negative regulation of cell growth and ventricular cardiac muscle tissue morphogenesis. Located in cardiac myofibril and cytoskeleton. Colocalizes with actin cytoskeleton. Implicated in familial hypertrophic cardiomyopathy and hypertrophic cardiomyopathy 10.

NR:

description
PREDICTED: myosin regulatory light chain 2, ventricular/cardiac muscle isoform

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K10351 MYL2; myosin regulatory light chain 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802092.1 True 846 mRNA 0.44 7 7932971 7939069
XM_039802093.1 False 715 mRNA 0.43 5 7932971 7939104

Neighbor

gene id symbol gene type direction distance location
ppp1cc ppp1cc coding downstream 2087 7924933 ~ 7930884 (-)
pptc7a pptc7,LOC102794815 coding downstream 8405 7914857 ~ 7924566 (-)
si:dkey-91m11.5 bcr,LOC106535678 coding downstream 112499 7766806 ~ 7820472 (-)
adora2aa adora2aa,LOC107667526,LOC107724898,LOC107600048 coding downstream 205911 7710144 ~ 7727060 (-)
LOC120560484 NA coding downstream 226475 7702359 ~ 7706496 (-)
LOC120561008 LOC103358998 coding upstream 149932 8089036 ~ 8161257 (-)
rab35b rab35,LOC103397428 coding upstream 274842 8213946 ~ 8235009 (-)
gcn1 gcn1 coding upstream 296455 8235559 ~ 8272303 (-)
vamp5 LOC104925279 coding upstream 335817 8274921 ~ 8281269 (-)
vamp8 LOC102799144,LOC100691194,LOC106935405,LOC103469540 coding upstream 365318 8304422 ~ 8321883 (-)
G59972 NA non-coding downstream 29059 7903693 ~ 7903912 (-)
G59970 NA non-coding downstream 30432 7902231 ~ 7902539 (-)
G59951 NA non-coding downstream 55766 7827141 ~ 7877205 (-)
G59875 NA non-coding downstream 315836 7610429 ~ 7617135 (-)
G59878 NA non-coding downstream 356396 7576229 ~ 7576575 (-)
G60064 NA non-coding upstream 231281 8170385 ~ 8170606 (-)
G60072 NA non-coding upstream 261932 8201036 ~ 8201375 (-)
G60073 NA non-coding upstream 262389 8201493 ~ 8201743 (-)
G60133 NA non-coding upstream 360073 8299177 ~ 8301619 (-)
LOC120560869 NA non-coding upstream 423656 8362760 ~ 8369854 (-)
anapc7 anapc7 other downstream 45546 7877399 ~ 7887425 (-)
specc1la specc1l other downstream 166959 7727560 ~ 7766012 (-)
G59881 NA other downstream 348452 7584086 ~ 7584519 (-)
G59739 LOC102786375,LOC102210956 other downstream 936115 6991203 ~ 6996856 (-)
G59563 NA other downstream 1409297 6522759 ~ 6523674 (-)
G60145 NA other upstream 461918 8401022 ~ 8402566 (-)
tacr1a tacr1,LOC102799894,LOC100703444,LOC102196095 other upstream 704299 8643403 ~ 8727443 (-)
unc5db unc5d other upstream 2183048 10122152 ~ 10518967 (-)
G60715 NA other upstream 3250038 11189142 ~ 11189741 (-)
abca2 abca2 other upstream 3346281 11285385 ~ 11593660 (-)

Expression


Co-expression Network