htr7c (htr7,LOC104934772,LOC100705941,LOC102292089)


Basic Information

Item Value
gene id htr7c
gene name htr7,LOC104934772,LOC100705941,LOC102292089
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 14107403 ~ 14142258 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802118.1
ACTCCGCAAACAGTCTATATTTGTCCGGTTAGTGAACTGAGAAACAAGCACTTCGGCATGTTTAGATTTCtataactattttttttcttttccaaatgTCATACTTTTGGAGTAGGAGTTATTTTTCCCCCTGAAGGGATGGAGCGCGCACTTATAACACTTCAGACGGAGCATTCCTAAACAGAAAGCAGTCAAGAAGGCTGTGTGAGTTGTTGGCAGCTGCGATGTGGTGCAGCTGCAACAGTCGCGATCTAAAACCGCTGGACAGGAGTCGAGAGCAAGTTACACATATCCAAATATGCGCGTAGAGTGCACTGGCGAGGTGTCCCTTGCACCCCTTCCGAGAAAACGTTGTCGTGATGTTCAATACTTCGGGAATTGAGCTCACTTTTACCAAGAAAGAGGATATTTCCGAAGTTATCAATGGCACTCTGCAGCTCATGTACAACGTCCTGGTCACCGTCAGTCCCACAACCATGTGGAACGAGTCATGCGGGGAGCAGCTGCAGGATTTCGGGCGCCCGGAGAAGATTATTATTGGGGTGATGTTGGCGATCATCACGGCCGTCACCGTCATGGGGAACACGCTGGTGGTGATCGCGGTGTGCGTGGTGAAGAAACTAAGGCAACCTTCAAACTACCTTCTGGTCTCTCTCGCAGTGGCGGACCTGTCAGTGGCCATAGTTGTGATGCCGTTTGTAATAGTGACTGACCTCACCGGGGGCAAGTGGCTTTTTGGAGAGGTGTTCTGCAACATCTTCATCGGCATGGATGTAATGTGCTGCACTGCCTCCATCATGACCCTGTGCGTGATCAGCGTCGATAGATATCTGGGGATCACACGGCCCCTCACATACCCTGCCCGGCAGAACGGTCAGCTGATGGCGAAGATGATCCTGGGAGTGTGGCTGGTGTCAGCATCCATTACCCTGCCGCCTTTCTGCGGCTGGGCCCAAAACGTACACACAGCCGGCGTGTGCCTCATTAGCCAAGACTTTGGCTACACCATCTATTCCACAGCTGTAGCCTTCTACATCCCTATGCTGGTCATGCTGGTCATGTACTACAAGATCTTCAGGGCAGCTCGCAAGAGTGGCGCCAAGCACCGCTTTAATGACCTTCCGCGCCGCGAGCGCATCGAAACAGTGACTAATGAGGCGCTGCGAATGCAGGGCCTGAAGCCGCCCGGGGTGGTGGAGGAGTGCGCGTCCTTATCGCGCCTGCTAAACCGTGAGCGCAGAAACATCTCCATCTTCAAGCGGGAGCAGAAAGCAGCGACAACACTGGGGGTGATCGTGGGGGTCTTCACTGTGTGCTGGCTGCCGTTCTTCATCCTGTCCACTGCCAGGCCCTTTATCTGTGGAGTGGAGTGTAGCTGTGTGCCCATCTGGCTGGAGCGCACGCTGCTCTGGTTAGGCTATGCCAACTCCCTAATGAACCCGTTCATCTACGCCTTTTTCAACCGAGACCTGCGCTCCACTTATCGTGACCTTCTCCGCTGTCGTTACCGCAACATCAACCGCCGACTGTCTGCTGTGGGCGTGCATGAGGCTCTCAAGGTTTAAAGCAGGGTAATTCAGCAGCATAAATTGACCCTCAAAGAGTAGGGCATGTGCCTGTGCTTGTACACAACGACAGACAGAATGGGAGTCACTGTTGGTGGCTCTCTGGCCGCCCGGCAAAAGCAGAGAGACGACAGGATCacttcattgtgtgtgtgactcagtCATTCTATTTTGGGAAAGAAAATCCTAGAACGTACTTGATGAGCTATTCAAGTCGACACTGCTTTTGTGCATATGCCACAATTCCGTCTTGGCTCTGGATTTATGGAAGGATAATGTAGTGACAAAGGAAATGACATGTCACAATCACACAATCAATCATCTTAAGGCTTTCAGAGGGTTAAGAAAGCAAACAGATTTCTGTATGATAACAAAATTGATGTTTGATAAGgcaaaacatttgttttgttgcacACTGTCTTCTAATCATCTTCATCTAAACATGCATTTGAGCACATCCCAGATTTATTTCaaacagagagtcagagacacTTGCTGTATTGTGCTTTGTGCTAGGACGAAATAttatttaaatcactttttctccAGTCACACTTTTCAATTTTGTCCTCTCACTAAATTTAACAAGAGCACCTTAAATGTTTCACAAATGTTTACAATGTGGCGATGCCAAGGGAATGGAAGTGGGTGGAAAATGGTGTTAAAATGCGACATGAAGGGAACATTTTTTCATTCATGAAATCTCAGTGTTTGTTGCTCTAAAAATGAACTGAAAGTAGTTTGTTTAGTGTCTGCATGAAACACATTTGTCTTACATGCCACTGTATACATAAATACACTGGTTACAGAATTCAGATTCTGAAAGTGTATAACAGTTTGGCAGAAGTGTTTTCATGTTTCAACCAACACTTTATCGCACACTTCAATTCCAAGTgaactgtatgtgtatgtgtcagaAACCATGATACTgtggacatttttcactcttGTTATTTTTGCCTCAAATCAATTTCATTCCACATTTGGCTGCTGACATTATTGGTTGTATACAGGTAACTAAACCTGTTGAACTCTGCAGTTTCACTTTAAGAATTGACGTGATGTTCTTGAGACTCTTCTGCCCCACAGGATGCCAACAGCGTTTCtatttaaattttgaatcaGGATGTGGATACTTCCCTCCTGACAATTCTCTCAGTGTCAAATGTCATCAGTCGAGTAGTGTGTGCTTTTTCTACCTCCATTTTTGAGATTTATGTACATTTCCTCCAAACAGATGTACCGCTGTCTTGCatcattttatatttaactGCTGTTTTATATTGTGTAAGATCAATCTATCTACAACTGCTCTGTGATTGCTCTGTTTGACCGCTTTGTCATTACCTTCAGAAATGAGATGGGGAGGTGGCAAAGCATTTCATCACTTTGTAAATAAAGAGGTTAAACACTTGGTTAAAATGTCA

Function

symbol description
htr7 Predicted to enable G protein-coupled serotonin receptor activity and neurotransmitter receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger; chemical synaptic transmission; and regulation of synaptic vesicle exocytosis. Predicted to be located in plasma membrane and trans-Golgi network membrane. Predicted to be active in dendrite. Predicted to be integral component of postsynaptic membrane and integral component of presynaptic membrane. Implicated in alcohol use disorder.

NR:

description
PREDICTED: 5-hydroxytryptamine receptor 7

GO:

id name namespace
GO:0007210 serotonin receptor signaling pathway biological_process
GO:0006939 smooth muscle contraction biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0007623 circadian rhythm biological_process
GO:0042310 vasoconstriction biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0004993 G protein-coupled serotonin receptor activity molecular_function

KEGG:

id description
K04163 HTR7; 5-hydroxytryptamine receptor 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802118.1 True 2992 mRNA 0.46 2 14107403 14142258

Neighbor

gene id symbol gene type direction distance location
LOC120559998 NA coding downstream 135267 13963143 ~ 13972136 (-)
nr6a1a nr6a1 coding downstream 242963 13740353 ~ 13864440 (-)
LOC120561314 nr5a1,sf-1 coding downstream 420497 13649892 ~ 13686906 (-)
LOC120561257 NA coding downstream 1012907 13084483 ~ 13094496 (-)
LOC120560514 LOC107752212,LOC107675959,LOC107679452 coding downstream 1046610 13059490 ~ 13060793 (-)
LOC120560956 LOC103141353,LOC103469718,LOC100701549,LOC106929229 coding upstream 104225 14246483 ~ 14248811 (-)
LOC120560399 LOC103369226,LOC100702093 coding upstream 113439 14255697 ~ 14260239 (-)
LOC120560975 pxn,LOC102314602,LOC102784766,LOC102212913,LOC101475765 coding upstream 146744 14289002 ~ 14312345 (-)
ctu1 ctu1 coding upstream 172336 14314594 ~ 14317390 (-)
crybb2 crybb2,LOC108234953,LOC100703162 coding upstream 175339 14317597 ~ 14319518 (-)
G61335 NA non-coding downstream 16653 14090475 ~ 14090750 (-)
G61334 NA non-coding downstream 25848 14081327 ~ 14081555 (-)
G61328 NA non-coding downstream 93841 14013336 ~ 14013562 (-)
G61304 NA non-coding downstream 250632 13856241 ~ 13856771 (-)
G61302 NA non-coding downstream 287675 13819510 ~ 13819728 (-)
G61359 rtili,piwil2 non-coding upstream 35065 14177323 ~ 14178170 (-)
G61404 tnks non-coding upstream 77089 14219347 ~ 14233438 (-)
LOC120560401 atp5ib,atp5i,LOC106580450 non-coding upstream 109995 14252253 ~ 14254503 (-)
G61422 NA non-coding upstream 139593 14281851 ~ 14282348 (-)
G61423 NA non-coding upstream 141917 14284175 ~ 14285887 (-)
G61264 NA other downstream 518071 13589039 ~ 13589332 (-)
LOC120561038 LOC102778062,LOC101486272,LOC102199534,LOC108245630 other downstream 1552118 12293707 ~ 12555285 (-)
LOC120561001 whrn,LOC102797690 other downstream 2045757 11901650 ~ 12061646 (-)
abca2 abca2 other downstream 2513743 11285385 ~ 11593660 (-)
G60715 NA other downstream 2917662 11189142 ~ 11189741 (-)
si:ch73-138n13.1 LOC102794857,LOC107084631 other upstream 185893 14328151 ~ 14364326 (-)
trnaa-agc_14 NA other upstream 796717 14938975 ~ 14939047 (-)
trnaa-agc_15 NA other upstream 802238 14944496 ~ 14944568 (-)
trnae-cuc_15 NA other upstream 806501 14948759 ~ 14948830 (-)
trnas-gcu NA other upstream 809244 14951502 ~ 14951583 (-)

Expression


Co-expression Network