LOC120560021


Basic Information

Item Value
gene id LOC120560021
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2504472 ~ 2508814 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802119.1
TTTATCCACGGAGGATTTAATCACGGAGTTACTTCGTTTTGGAGTAGAGGTCACTGAAGAGGAGAGAAGTAAATTCAAAGATAATGAAGTTGACGGAGAAGCAGTGGACTATGGATTGACTGAGAGGATGGTTTCATACCTCTTTGAAGGATCATTTAAGAAGCAAGCCAAATTCAACCGATTTGTTCAGCAGTGGAAAGAAACTGTGACACTAACCCTTGAGCCTGTCCCGGTACATTCAGAGAAGGCTACAGCGGAATCAAGTCATGCCATCCCATCATCAGCCTTCCCAGCAGTTTTCATCATTCCTAAATTTCCCAGAGATGTTCAGACAAAGTTGGACCAAAAACCGCCATGCAAAATTGAGAGATCCGATCACAACAAAATCATAAGAACATTGTATGAAACCATGGCCCTGATCAAAATGTTCCCGACCAATGATGACTATGTGAAAGTGTGCAAGGCCCTGATTTTGAAATACCCTTTCTTAAAGGACAAAGAAGGCAATGGTTATCATACCTGGCACATGTCTCTCAAACGTAAGTTCAAATATGAGCGGGTGCCGCTGATAGATGATGAGGAGGTGAGAAGAATGAAACTGAAATTTGGTCATCACAAAAAGCCTTTGCAACACgaagaaaacacaagcaaacgAGCCAAGACATCAAAGGAGGTGGATATTATTGGGGAGGATGATACCTCAGTAGCGGGCCATGTGAAAGTCCTGCAGGACCAGTACCGGAAGACACAGCCAGATGTCCGAATGGTGGAAGAACGTATGATGAGGACATTCGCTTGGAGAAGGCGAGAGATTGCCAATGGGATGACTGTCGAAGAAGCCATTAACAAATATCCATTCCTTAAAAGTCCATGCAGGCTATTTCAGGAAATGGGCCGGCTTCATGATGAAATGAATATCTGCCGAAGATTCGAAGATGGCTTTAAGGTCCTAGTACCCACAGTGCTTAGATTGACTCAAAGGAAATCTCCCCTTGCAGATCTGGCTTTGGAGGAAAGAGAGGCTGCCCTCACCGAAGATGTCCCTGGGATTGATTTCAGAGCTGCAATCCTGCTGTTGCCGATCCTGTTCAGGGAGAAAAATGACGTTCTCGTCATACTTGGGgagGATCAGCCACCATCGCCATATCCTACTGTACAACTCGACGCTGTCGCTGACTGGAGGACTGTGCTCACTCGAAGGGTCCCTGCAGTGGTCAAACTGGATGGACAGTCAGTCTGCATGGCGCTTGGTTTGGAGGAAGGTGTTATTGCTGCTTTTTGTGCTTACTTCATCTACAACGTGGTATATCCATCTCGCCTGAAGAACACCCTGATTTTCATTCAGCGATATGTTCTAAAAATGTCTGAGGTTGGTGACAAGCCTCTACCTGTTAGTGTGACCAGGGTAATCAACATTTTAGCTTGATCAACAACAGCAATGCGTACACCATTCAGCTGTCCTAAATGCTCTCGAAGAGCCTTCACATTGGTGAAGTTAATCCAGCACATCGGACTTGTTCATGCACATGAACCACATTTTACCATAACGTGTGGCCTTAACAACTGTCaatcaacattttctaaataTGAGTCCTTCCGACGACATATTTACAGGAAGCATAAAGACATTATAGCCAGACGAGCCACTGCTCATGATATACAGGAAACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802119.1 True 1670 mRNA 0.45 9 2504472 2508814

Neighbor

gene id symbol gene type direction distance location
lrrtm4l2 LOC104959582,LOC103353626 coding downstream 148202 2353073 ~ 2356270 (-)
vsig8b NA coding downstream 173649 2324986 ~ 2330823 (-)
LOC120560449 NA coding downstream 185196 2318287 ~ 2319276 (-)
cabin1 cabin1 coding downstream 241658 2217592 ~ 2262814 (-)
tbx16 LOC104928806,LOC103353632 coding downstream 287761 2207405 ~ 2216711 (-)
LOC120560452 LOC104959125 coding upstream 28404 2537218 ~ 2537559 (-)
LOC120560454 NA coding upstream 42614 2551428 ~ 2552694 (-)
ggt5a ggt5 coding upstream 110401 2619215 ~ 2627761 (-)
si:ch211-170d8.2 NA coding upstream 158448 2667262 ~ 2671095 (-)
hps4 hps4,LOC102793116 coding upstream 161420 2670234 ~ 2683703 (-)
LOC120561196 NA non-coding downstream 12678 2491267 ~ 2491794 (-)
G58588 NA non-coding downstream 24864 2476272 ~ 2479608 (-)
G58560 NA non-coding downstream 169450 2334746 ~ 2335022 (-)
G58559 NA non-coding downstream 170283 2333979 ~ 2334189 (-)
LOC120561446 NA non-coding downstream 321744 2179896 ~ 2182728 (-)
G58596 NA non-coding upstream 9141 2517955 ~ 2518201 (-)
G58625 NA non-coding upstream 47831 2556645 ~ 2556863 (-)
G58678 NA non-coding upstream 207087 2715901 ~ 2716316 (-)
G58716 NA non-coding upstream 292928 2801742 ~ 2801971 (-)
G58725 NA non-coding upstream 304557 2813371 ~ 2813695 (-)
ankrd39 LOC103353637,LOC100700369 other downstream 364829 2137796 ~ 2139643 (-)
rimbp2 rimbp2,LOC107081823,LOC108247306,LOC103353655 other downstream 846424 1532053 ~ 1658048 (-)
LOC120560045 NA other downstream 2479523 17589 ~ 24949 (-)
LOC120560995 NA other upstream 41232 2550046 ~ 2551366 (-)
ggt1a ggt1,LOC102775580,LOC108234964 other upstream 69061 2577875 ~ 2592746 (-)
si:ch211-107p11.3 LOC103353652,LOC102075650,LOC108234931,LOC104950460 other upstream 177077 2685891 ~ 2689087 (-)
LOC120561394 LOC107097799,LOC103353613,LOC101077666 other upstream 181796 2690610 ~ 2692543 (-)
LOC120561349 donson,LOC102310661 other upstream 325374 2834188 ~ 2846607 (-)

Expression


Co-expression Network