mvb12bb (LOC104950954)


Basic Information

Item Value
gene id mvb12bb
gene name LOC104950954
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 732697 ~ 773213 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802122.1
GGCAGGGTGGCGCGGGGCAAAGTCCGAAGTTGAAAAGGTGACAGCTGGTCACAGCACTCAGGAGATCGACGCTTTAACCAGCTTTGACATGTCTGAAGTGAGCAACCAGCTGCCCACAGAACCCATCTCTGCAGTTGGAGTAATCACTTCACCCAGCAAGGCCCCTGATGGCCACTATGTTGTTGCACAAACAACAGATGGCTGTGATGCCGACCTGTGGAAGGACGGCTTATTCAAATCCAAGGTCACTCGCTACCTCTGTTTCACCAGAAAAACTGGGCCGGACGTTGTTGTGGACGTGAAGCTGATTGACATTAAGGACGCGTTGCCAGAGGGCTTCACACCTGTGGGAGAAACATGGGACACAAAGGAAACTGCCACGAGGAAGAAGAGGCTCTGCATGAAAATCAGCCCTCGTGCGGCTGCTGTGACGGCGGTGTACGACATTCAGATCACAGCGAAGTCCAAGTACCATCTTGTTAACTACACCTGCATAGGTGAGATAAACAGTATGGGGCTATGGTACCGGATGGGAGATGTTTCTCAGCATCAGTCATCCCAGGAAACGTCCAGTACAGCTAACAGTGACGCTCCACCCAACACAGCAAGGGCGAGGACCACGATCAGGCCGGACTATGAGCGCCAGAGCAGTGGGAACTACACCATGACAGCTCTTGACGATGTGCCCTTTGTGATCTCTGACAAGTTTTTTGGAAATCCCAAAGAGATGCAGCAAGTCAATTTAATGGGCATTACGATCAAATCCCTGGCAGAGATCGAGGAGGCAttttactaCAACTTCAGCACAGAGCGAAGCGTTGCTGTGTAACTGTCACCCCGGCAGACCGAGACACTACACATACAAGATGGAATAACGTACTaatgaaaggaagaaaaagttTGGGATGCACCACTGCTGTATATTGTGTaattcaacacacacaaaaagagtaGTTTTAC

Function

NR:

description
PREDICTED: multivesicular body subunit 12B-like

GO: NA

KEGG:

id description
K12186 FAM125; ESCRT-I complex subunit MVB12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802122.1 True 960 mRNA 0.50 10 732697 773213

Neighbor

gene id symbol gene type direction distance location
pbx3b pbx3 coding upstream 138892 532813 ~ 593805 (+)
gapvd1 gapvd1,LOC102777314 coding upstream 300068 381172 ~ 432629 (+)
unm_hu7912 LOC102295462,LOC101483439,LOC103375604,LOC100694328 coding upstream 355782 367381 ~ 376915 (+)
syn1 syn1,LOC102209911 coding upstream 376344 340977 ~ 356353 (+)
LOC120561159 rasal1 coding upstream 488503 223141 ~ 244194 (+)
zbtb34 zbtb34,LOC100694860,LOC102780544,LOC102300203 coding downstream 96818 870031 ~ 877817 (+)
adamts13 adamts13 coding downstream 256044 1029257 ~ 1052283 (+)
LOC120560446 LOC104936599 coding downstream 332751 1105964 ~ 1127084 (+)
si:dkeyp-14d3.1 tmem132c coding downstream 384257 1157470 ~ 1329623 (+)
glt1d1 glt1d1 coding downstream 598571 1371784 ~ 1396195 (+)
G57999 NA non-coding upstream 129517 166018 ~ 603180 (+)
G58057 NA non-coding upstream 160165 541890 ~ 572532 (+)
G58024 dtx1,LOC106585516,LOC106579922 non-coding upstream 473000 257568 ~ 259697 (+)
G58021 dtx1 non-coding upstream 480625 245891 ~ 252072 (+)
G58011 NA non-coding upstream 522021 209281 ~ 210676 (+)
G58151 NA non-coding downstream 106041 879254 ~ 882251 (+)
G58156 NA non-coding downstream 118884 892097 ~ 892439 (+)
G58157 NA non-coding downstream 125680 898893 ~ 899506 (+)
G58209 crat,LOC107393635,LOC102215149,LOC101477431 non-coding downstream 279802 1053015 ~ 1053413 (+)
G58215 ier5l,LOC103375736 non-coding downstream 287816 1061029 ~ 1062510 (+)
LOC120560799 NA other upstream 520314 210742 ~ 212383 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other downstream 16192 789405 ~ 837861 (+)
dock5 dock5 other downstream 1500465 2273678 ~ 2312665 (+)
lman2lb NA other downstream 2105161 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 2661952 3435165 ~ 3522756 (+)
G59086 NA other downstream 3344066 4117279 ~ 4117631 (+)

Expression


Co-expression Network