fgf10b (fgf10,LOC104956796)


Basic Information

Item Value
gene id fgf10b
gene name fgf10,LOC104956796
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 26952220 ~ 26961992 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802161.1
GATCACAGCAGGACTCCTCATATCAAGGACCTAATGAACAGGAGACGAACAACTCTGATTTAACcctgagacagagagaaagacctcCTCTTACCTCGATGCTGCATGAAGGTGGAGTCATTTGGGGGtagcgagagaaagagagagagggagagagagagagagatgaggagagtGAGAAAGGAGCAGAGCAACAGAAGAAGACAGATGGATTATCTGACATGCGCCTGGATTGACCAGCGTTTTTCTTTAAGTCTTGATTCCTGTTTTTCCTCCTCAGAGGGAAATCTGAAAATGCTTTCCTGCACATGTGGAGTGTAGCAGCTATCGGACAGGTAGATTGTGTGATACACCTTTTTTAATTTCCACTGGAACTGAGGAATTTTACACATGGCAAACTTTCTACCTGGATATCAGTGAACTTcatattttttctcttcttttcttttgttcttaAATTGAGCAACTGCCTGGAAATACACACTGGAGCAGCCAAGAACAATAGTCAAAATTTCACAAACAATTTAGAATGAATTAGAAAACACAAGATAAGTGGAAAAACAGGTTTTGTTACTGGAATACTAGTTACTAGAAAATAGTAATTGGTgtgtagttttttatttttttatttacgtaATCTTTGTTCATTTAGACcgatttatttttccaaaacaGACTTTCTGATCATCAGCCTAAAACAGTGGAGAAGAGAAATCAGTGGAATATCAGCTGGAGACACAGTGACTTGTTGAACAGTCATTACACTGTCAAACATTATTCAGAGGGACATCTAAGAATTTCATCCAGGTGCTAAATAATTTGGATTCTGCAGGAGAACCATCTCGCCTAGTCTGGACTGTGGAGGGCTCCCCTCCCTGCCCTCCCAGCCTATCCTCGCCCCCAGCAGCATGTCCCAGGCTCTGAGGCTGCCTCTAGTCCTCCACACAGCACACTACCATGATCAGATGGGCTGCTGGAGGGAGTAAGGCTGCCTCTGCCTCGTACTGCTCCAGGGCTGGGTTCGGGGCTCTTTTTGGAAGTGCAACCAGCTCCAGACTAAGGCCATCATCAACACTGCTTTCCTCCCTGTCTTTGCCTCTCCTGCTTGCCCtggtgtttttttccttctcccTACCCGAGGCGGCCTGCCATCAGCTCCGCATAGACAGACTGAGGCTCGCCAACCCACGGACTCTCAGGGTTCCACTGAACATTTCTGAGACTGAGGTCGTCTCAAGGACCAGGGCCACTGGGGTCCCCCTGGGTCGGACTGGGGGGCCGCAGGGTAGGCATGTGCGCAGCTACAATCATCTCCAAGGGGACATGCGGAGGAGGAAGCTCTTCTCCTTCCAGAAGTTTTTCCTGAGGATCGATAAGAACGGAAAGGTCAATGGAACCAAGAGCAAGGATGACCCCCTCAGTATTCTGGAAATCACATCGGTGGACGTGGGAGTGGTGGCCATCAAAGGGCTAAACAGCAACTACTATCTGGCTATCAGCAGGAAGGGAGAGCTGTACGGAGCGAGAGAGTTTGGTGTCGACTGCACCCTGAAGGAGCGGATTGAGGAGAATGGCTACAACACGTATGCATCAGCTGAGTGGAGGAACAAGAAGAGGCAGATGTTTGTGGGTCTGAATGTCCACGGGAAGCCACTGAGAGGGAAGAAAACCCGCAGGAAGAACACGGCCACCCACTTCCTTCCAATTATGGTGTGAACTGGAGGACTTAACTGGAGAAGGAGGATATGCAGCACTGGACAGAGAGGTTCCCAATactgaaaaagctgtaaaataaagacatttactGAGAAATCTCTCATTTGGAAATAAGGCACTAACACTGTTACAGTTTTATTTAGTGGGAGAAGATGATATATGTGTATTCTGTGGCACGGGATGCAATATGtatcctttttttctgtgccaAACAGTTTGCAACTGGAGGATTTGTGTAATGTGGACAACACAGAAGATACTGTCCCAGCTAATGTACTGCGGTAGATGCAGACAATGTTATTTATAATGCATATTCTCCTCTGAGACACCAGATAATCTGCAACATAAAGGTGAGCGATAGAAATGGATAAGGTGAGGGCAATTATCAGTCAGTTTATCACAACAGCATTAAATAATAGAGGATACAACACATTTAAAGCAAATGTTTGATACTTAACCACTGTGTTTTGACTGTATtgtaatgatttatttattttgtgaaatatttAACTGGAGGGGAACACTTACAAGGCAAGCATTCCTTTGCATTCTTTACTTTTTATAGGAACTCTattatgtgaaaataaaataccacTTTCTCCTCTGCAATGCTGTCGTCTTACTCTATCAATTTACAAAAACTGACTTTACTGATGAGGAACTGCAAGTAGTGAGAAACCCTGGTGAACGTTCAGGTCATGCTAAGTCTATTCTTATCTGGCCCTCTGTGGTAGGAAGGGACAAAAGGCAACCATTAATGCCTAGCCAGATATTCCATGTGGCAACCATTGCACTAATGATTAGTTCCCAAACAAACGGGAAACATACAGACCGACCACAACAAAATGGGAGGGAGGTTACTTCCGTGGCATGGCCTGTAGATGCTGACATCATTTCCTAATATCACCCCATTACTCTAGAGCTGCAACATTCCCAGATAGCAGGAGGGCTTGAATAGTAAAGTTGCTGATAATACTAGCAGAAAATATGAATGTTGTCATGCTGGTCTGCATCACTACTGCCAATAGGTTGCTGGAGAATTTGAATGTGTGTGGAGGTAGAAATGTGaatgagggagaaagagagatatgACCTGTGTCTGACCACCCACTTCCCTCAGTAATCATCTACAAACACACTAATCAATGACAGCTGCCCTGATGCCAGATCAAAAGACCACGGGGAGAACATTAACACCACAGGCTTCCGGGCCTCATGTTCTCTTATCCCGCCTCTCTGAACAGCCATCTCAGCAAAGGCATGAAAAATTGGGAGAGTTGACAAAGACAAGAAGGTGAAAGACAGAATGCAAAAGGCTGTCTTCGTTACCAAATTTATCCAAGTTGGCCCGTGACTGTGACTCCAGATTGGAAACAACAAAAGTAATGTGAACTATAGGAATCCAGAGTCCAGGAAACCATCAGCTTTAGGCTACAGTATATTGTCTTTTAATGGTCGTTTTAAGGAATCACCGCGATGAATGATTAATACCGAGGAATGCTGCAGTACATTCCATCATGAAAGTCAGGGCCAACGGCAACATATGGAACACTATTTCATGACCATCTCTGCACCATACACAGGCTACACAGCACTGTATTACATTTTCTCCGCTCTCTTTAGGGTTAGGAAGTTTAA

Function

symbol description
fgf10 Enables heparin binding activity; receptor ligand activity; and type 2 fibroblast growth factor receptor binding activity. Involved in several processes, including animal organ development; positive regulation of cell population proliferation; and positive regulation of intracellular signal transduction. Acts upstream of or within several processes, including fibroblast growth factor receptor signaling pathway involved in mammary gland specification; lung development; and positive regulation of urothelial cell proliferation. Located in several cellular components, including cell surface; extracellular space; and nucleus. Colocalizes with collagen-containing extracellular matrix. Implicated in LADD syndrome and aplasia of lacrimal and salivary glands.

NR:

description
PREDICTED: fibroblast growth factor 10-like

GO: NA

KEGG:

id description
K04358 FGF; fibroblast growth factor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802161.1 True 3354 mRNA 0.44 3 26952220 26961992

Neighbor

gene id symbol gene type direction distance location
adamts12 adamts12 coding upstream 6753 26924528 ~ 26945467 (+)
myl7 myl7,LOC101480470 coding upstream 41792 26908203 ~ 26910428 (+)
gck gck coding upstream 44701 26901799 ~ 26907519 (+)
osmr NA coding upstream 64394 26877033 ~ 26887826 (+)
LOC120560731 arhgef28,LOC104956788,LOC103359538 coding upstream 75269 26837272 ~ 26876951 (+)
paip1 paip1,LOC104941454 coding downstream 3492 26965484 ~ 26974939 (+)
itga2.2 itga2 coding downstream 19353 26981345 ~ 27002644 (+)
fsta fst coding downstream 43147 27005139 ~ 27011321 (+)
snx18a snx18 coding downstream 217368 27179360 ~ 27193519 (+)
LOC120560992 LOC106926053,LOC103469987,LOC103145901,LOC108233650,LOC105928392,LOC106519893 coding downstream 347208 27309200 ~ 27324830 (+)
LOC120560738 NA non-coding upstream 52662 26897902 ~ 26899558 (+)
G64967 ykt6 non-coding upstream 56077 26893701 ~ 26896143 (+)
G64949 btf3,LOC103470010,LOC107089645,LOC106958054,LOC106926613 non-coding upstream 123035 26761391 ~ 26829185 (+)
G64944 NA non-coding upstream 267965 26682518 ~ 26684255 (+)
G64930 NA non-coding upstream 288694 26662767 ~ 26663526 (+)
G65083 NA non-coding downstream 237957 27199949 ~ 27200190 (+)
G65106 NA non-coding downstream 417006 27378998 ~ 27379215 (+)
G65108 NA non-coding downstream 427465 27389457 ~ 27389862 (+)
G65171 NA non-coding downstream 514756 27476748 ~ 27476966 (+)
G65272 NA non-coding downstream 941083 27903075 ~ 27904933 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other upstream 290325 26644661 ~ 26661895 (+)
cltcl1 LOC100691387,LOC103359525 other upstream 308053 26614237 ~ 26644167 (+)
c6h22orf39 clg12h22orf39 other upstream 455233 26494284 ~ 26496987 (+)
G64814 cldn5,LOC103357131 other upstream 537623 26412869 ~ 26414597 (+)
nsd3 whsc1l1 other upstream 568377 26359120 ~ 26383843 (+)
ndufs4 ndufs4 other downstream 50218 27012210 ~ 27039599 (+)
G65084 lipg other downstream 243242 27205234 ~ 27370959 (+)
mboat4 NA other downstream 1883634 28845626 ~ 28849471 (+)
ubac1 ubac1 other downstream 2382588 29344580 ~ 29351756 (+)
fbxo21 fbxo21 other downstream 3224856 30186848 ~ 30212108 (+)

Expression


Co-expression Network