Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120560091 |
| gene name | NA |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053117.1 |
| NCBI id | CM020914.1 |
| chromosome length | 43979800 |
| location | 27418709 ~ 27420717 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0004175 | endopeptidase activity | molecular_function |
| GO:0004197 | cysteine-type endopeptidase activity | molecular_function |
| GO:0008234 | cysteine-type peptidase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039802202.1 | True | 695 | mRNA | 0.47 | 5 | 27418709 | 27420717 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mthfd2l | mthfd2l,LOC102288655,LOC100709995 | coding | upstream | 1505 | 27394417 ~ 27417204 (+) |
| LOC120560992 | LOC106926053,LOC103469987,LOC103145901,LOC108233650,LOC105928392,LOC106519893 | coding | upstream | 93879 | 27309200 ~ 27324830 (+) |
| snx18a | snx18 | coding | upstream | 225190 | 27179360 ~ 27193519 (+) |
| fsta | fst | coding | upstream | 407388 | 27005139 ~ 27011321 (+) |
| itga2.2 | itga2 | coding | upstream | 416065 | 26981345 ~ 27002644 (+) |
| LOC120559995 | NA | coding | downstream | 1820 | 27422537 ~ 27428690 (+) |
| areg | NA | coding | downstream | 13278 | 27433995 ~ 27442196 (+) |
| gpx8 | gpx8,LOC102796953 | coding | downstream | 49539 | 27470256 ~ 27472819 (+) |
| tut7 | LOC104960608 | coding | downstream | 64985 | 27485702 ~ 27509635 (+) |
| isca1 | isca1 | coding | downstream | 89709 | 27510426 ~ 27516589 (+) |
| G65108 | NA | non-coding | upstream | 28847 | 27389457 ~ 27389862 (+) |
| G65106 | NA | non-coding | upstream | 39494 | 27378998 ~ 27379215 (+) |
| G65083 | NA | non-coding | upstream | 218519 | 27199949 ~ 27200190 (+) |
| LOC120560738 | NA | non-coding | upstream | 519151 | 26897902 ~ 26899558 (+) |
| G64967 | ykt6 | non-coding | upstream | 522566 | 26893701 ~ 26896143 (+) |
| G65171 | NA | non-coding | downstream | 56031 | 27476748 ~ 27476966 (+) |
| G65272 | NA | non-coding | downstream | 482358 | 27903075 ~ 27904933 (+) |
| G65314 | NA | non-coding | downstream | 581822 | 28002539 ~ 28005121 (+) |
| G65362 | NA | non-coding | downstream | 950739 | 28371456 ~ 28371841 (+) |
| G65378 | NA | non-coding | downstream | 1041908 | 28462625 ~ 28463104 (+) |
| G65084 | lipg | other | upstream | 47750 | 27205234 ~ 27370959 (+) |
| ndufs4 | ndufs4 | other | upstream | 379110 | 27012210 ~ 27039599 (+) |
| si:dkey-178e17.1 | slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 | other | upstream | 756814 | 26644661 ~ 26661895 (+) |
| cltcl1 | LOC100691387,LOC103359525 | other | upstream | 774542 | 26614237 ~ 26644167 (+) |
| c6h22orf39 | clg12h22orf39 | other | upstream | 921722 | 26494284 ~ 26496987 (+) |
| mboat4 | NA | other | downstream | 1424909 | 28845626 ~ 28849471 (+) |
| ubac1 | ubac1 | other | downstream | 1923863 | 29344580 ~ 29351756 (+) |
| fbxo21 | fbxo21 | other | downstream | 2766131 | 30186848 ~ 30212108 (+) |
| LOC120560820 | NA | other | downstream | 2826170 | 30246887 ~ 30251519 (+) |
| G65899 | taok3 | other | downstream | 3153369 | 30574086 ~ 30578159 (+) |
