ewsr1b (ewsr1,LOC102785556)


Basic Information

Item Value
gene id ewsr1b
gene name ewsr1,LOC102785556
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 19364006 ~ 19372609 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802290.1
tgttttctgcGAACAGAAAAACGTTTCTCCAGCAGCCAACCTTCTCCAGTCGTCTTGTACAGGCACACTAAAATGGCGTCAGCTCCGGCAGATTACAGCTCCTACAGTCAGACCACTGCTCAGCAGGGGTATGCCTCTTATGCTGCCCAGCCCTCACAAAGCTATGGACAGTCTGCAGCACAGcagAGCTATGGTCAACAGAATTATGGATCATATGCccaacctgctgctgctgacggCACTTACACCCAGACAACACCTGCCGCCGCAGGCTACactcagcagcagcaacaacagtatGGGTCCTCGTACACCCAGCCAGCAGCAGCTGGCTATCCTGCTGCCCAGTCGACCACTCATGCCTACTCCCAGTCAACCCAGGGTTATGGAGCCAGTGGTTATGACAGtactcctgctgctgctgctccagctGCCTCCCAGTCTTACGGCTCTCAGCCAGGGTATACTGCCCAGTCTGCCTACCCTGGTTATGGCCAGCAGGCTGCTCCCACTGCACCGCAGAGTTACAATGCTAGCAGCCAGCCAGCCACTTACAACCAAAGTAGTTACTCCCAGCCAGCAGCATATGGCCAGCAACAGTCAGGCTACCAGGCTGCGCAGGCAAGCTACGGTCAGCAGGGCTACCAGCAACAGTCCCAGCAGCAGTCCCAGGCTCCTCCTGCTTACCCTCCTCAGGCTTCTGGTTCCTATGGGCAGCCTCCAGCCAATCAGTACAGTCAACAGGGTGGACCTCCCAGTTACAACCAGTCCAACCATTACAATAATTACAGACAGGATGGCCAGGGTGGAGGTTCTGGTTACTCTGGCTCTGAGTCTTCAAGGTACTCTGGGTCAGGGGAGAACAGAGGCAGGGACGGCTTTGATCGAGGTGGAATGATGCATCGTGGCCGTGGAGGCATGGGCCGTGGCATGGGCAGCGCTGGAGACAGAGGTGGCTTCAGTAAGCCTGGTGGACCTATGAACAGCGACGAGCGTGAAACTGGACGCCCTGAAGAGCAGGATGACTCTGAGAACAGCACAATCTACATCACAGGATTGACTGAGAAGGCTAACCTGGAGGAGATGGCTGAATTCTTTAAACACGTTGGCCCGATTAGGATTAACCGCAGACTTGGCCAGCCTGCCATtaacatatacacagacaagGACTCAGGAAAGCCCAAGGGAGATGCCACCCTATCCTATGAGGAGCCCGTCTGTGCCAAAGCAGCTGTAGAGCATTTTGATGgAAAGGAGTTCCAAGGCCGAAGGCTTAAGGTGTCCATGGCACGCCGTAAGCCCATGATGGGTGGAATGAGGGGTGGCATGCCCATGCGAGATGGCATGATGGGCCGTGGAGGTATGATGGGCCGTGGAGGTGACCGTGGCGGGTTCATGCCACGTGGTGGTCCTCGTGGTATGGGCAGAGGTGGACCCACAGGAGGCAACATGCAGCAGAGAGCTGGGGACTGGGAGTGTCCTAACCCGGGTTGTGGTAACCAGAACTTTGCCTGGAGGATGGAGTGTAACCAGTGCAAAGCCCCCAAGCCAGAAGGGTTGGGCGGTGGCCCTCCCTTCCCCCCTGGAGGTGACAGAGGCAGAGGGGGAATGGGAATGCGTGGAGGCAGAGGCATGGACCGTGGTGGGCCCGCAGGAGCTGGAGGCCCTGGTGGTCCCGGAGGTTTCCGTGGAGGTTGGGGAGGCGACCGTGGTGGATTCAGAGGACGTGGTGGAATGGACAGGGGAGGTTTCCGAGGGGCCGGGCGTGGAGGACCACCTATGGACCGAATGGGTGGCAGAGGTGGAAGAGGAATGGGCCCTCCAGGTGGCAAGATGGATATGAGggacCATCGTCAGGAGCGCAGGGAGCGACCCTACTGATGGAGAACTTCTTGATTGTTCCTCTTGTGgaatttgatttttaaaataaaaaattttaatttatgATTCCATATTTCGGTGGTTATAGAACTGCTTTCAAACATCCTGTGCAGTTTCATTGAactcatttccatttttttttagtttaccCATGTTTATGCCACATCTTGTATTGTgcacgttttgttttttttaaatatgctgaTTAGGTTTGACATTGTGTTGTaaaatgctttttctttttttttttttcctcatttgttTA
>XM_039802291.1
gttttctgcGAACAGAAAAACGTTTCTCCAGCAGCCAACCTTCTCCAGTCGTCTTGTACAGGCACACTAAAATGGCGTCAGCTCCGGCAGATTACAGCTCCTACAGTCAGACCACTGCTCAGCAGGGGTATGCCTCTTATGCTGCCCAGCCCTCACAAAGCTATGGACAGTCTGCAGCACAGcagAGCTATGGTCAACAGAATTATGGATCATATGCccaacctgctgctgctgacggCACTTACACCCAGACAACACCTGCCGCCGCAGGCTACactcagcagcagcaacaacagtatGGGTCCTCGTACACCCAGCCAGCAGCAGCTGGCTATCCTGCTGCCCAGTCGACCACTCATGCCTACTCCCAGTCAACCCAGGGTTATGGAGCCAGTGGTTATGACAGtactcctgctgctgctgctccagctGCCTCCCAGTCTTACGGCTCTCAGCCAGGGTATACTGCCCAGTCTGCCTACCCTGGTTATGGCCAGCAGGCTGCTCCCACTGCACCGCAGAGTTACAATGCTAGCAGCCAGCCAGCCACTTACAACCAAAGTAGTTACTCCCAGCCAGCAGCATATGGCCAGCAACAGTCAGGCTACCAGGCTGCGCAGGCAAGCTACGGTCAGCAGGGCTACCAGCAACAGTCCCAGCAGCAGTCCCAGGCTCCTCCTGCTTACCCTCCTCAGGCTTCTGGTTCCTATGGGCAGCCTCCAGCCAATCAGTACAGTCAACAGGGTGGACCTCCCAGTTACAACCAGTCCAACCATTACAATAATTACAGACAGGATGGCCAGGGTGGAGGTTCTGGTTACTCTGGCTCTGAGTCTTCAAGGTACTCTGGGTCAGGGGAGAACAGAGGCAGGGACGGCTTTGATCGAGGTGGAATGATGCATCGTGGCCGTGGAGGCATGGGCCGTGGCATGGGCGCTGGAGACAGAGGTGGCTTCAGTAAGCCTGGTGGACCTATGAACAGCGACGAGCGTGAAACTGGACGCCCTGAAGAGCAGGATGACTCTGAGAACAGCACAATCTACATCACAGGATTGACTGAGAAGGCTAACCTGGAGGAGATGGCTGAATTCTTTAAACACGTTGGCCCGATTAGGATTAACCGCAGACTTGGCCAGCCTGCCATtaacatatacacagacaagGACTCAGGAAAGCCCAAGGGAGATGCCACCCTATCCTATGAGGAGCCCGTCTGTGCCAAAGCAGCTGTAGAGCATTTTGATGgAAAGGAGTTCCAAGGCCGAAGGCTTAAGGTGTCCATGGCACGCCGTAAGCCCATGATGGGTGGAATGAGGGGTGGCATGCCCATGCGAGATGGCATGATGGGCCGTGGAGGTATGATGGGCCGTGGAGGTGACCGTGGCGGGTTCATGCCACGTGGTGGTCCTCGTGGTATGGGCAGAGGTGGACCCACAGGAGGCAACATGCAGCAGAGAGCTGGGGACTGGGAGTGTCCTAACCCGGGTTGTGGTAACCAGAACTTTGCCTGGAGGATGGAGTGTAACCAGTGCAAAGCCCCCAAGCCAGAAGGGTTGGGCGGTGGCCCTCCCTTCCCCCCTGGAGGTGACAGAGGCAGAGGGGGAATGGGAATGCGTGGAGGCAGAGGCATGGACCGTGGTGGGCCCGCAGGAGCTGGAGGCCCTGGTGGTCCCGGAGGTTTCCGTGGAGGTTGGGGAGGCGACCGTGGTGGATTCAGAGGACGTGGTGGAATGGACAGGGGAGGTTTCCGAGGGGCCGGGCGTGGAGGACCACCTATGGACCGAATGGGTGGCAGAGGTGGAAGAGGAATGGGCCCTCCAGGTGGCAAGATGGATATGAGggacCATCGTCAGGAGCGCAGGGAGCGACCCTACTGATGGAGAACTTCTTGATTGTTCCTCTTGTGgaatttgatttttaaaataaaaaattttaatttatgATTCCATATTTCGGTGGTTATAGAACTGCTTTCAAACATCCTGTGCAGTTTCATTGAactcatttccatttttttttagtttaccCATGTTTATGCCACATCTTGTATTGTgcacgttttgttttttttaaatatgctgaTTAGGTTTGACATTGTGTTGTaaaatgctttttctttttttttttttcctcatttgttTA
>XM_039802292.1
TCGTCTTGTACAGGCACACTAAAATGGCGTCAGCTCCGGATTACAGCTCCTACAGTCAGACCACTGCTCAGCAGGGGTATGCCTCTTATGCTGCCCAGCCCTCACAAAGCTATGGACAGTCTGCAGCACAGcagAGCTATGGTCAACAGAATTATGGATCATATGCccaacctgctgctgctgacggCACTTACACCCAGACAACACCTGCCGCCGCAGGCTACactcagcagcagcaacaacagtatGGGTCCTCGTACACCCAGCCAGCAGCAGCTGGCTATCCTGCTGCCCAGTCGACCACTCATGCCTACTCCCAGTCAACCCAGGGTTATGGAGCCAGTGGTTATGACAGtactcctgctgctgctgctccagctGCCTCCCAGTCTTACGGCTCTCAGCCAGGGTATACTGCCCAGTCTGCCTACCCTGGTTATGGCCAGCAGGCTGCTCCCACTGCACCGCAGAGTTACAATGCTAGCAGCCAGCCAGCCACTTACAACCAAAGTAGTTACTCCCAGCCAGCAGCATATGGCCAGCAACAGTCAGGCTACCAGGCTGCGCAGGCAAGCTACGGTCAGCAGGGCTACCAGCAACAGTCCCAGCAGCAGTCCCAGGCTCCTCCTGCTTACCCTCCTCAGGCTTCTGGTTCCTATGGGCAGCCTCCAGCCAATCAGTACAGTCAACAGGGTGGACCTCCCAGTTACAACCAGTCCAACCATTACAATAATTACAGACAGGATGGCCAGGGTGGAGGTTCTGGTTACTCTGGCTCTGAGTCTTCAAGGTACTCTGGGTCAGGGGAGAACAGAGGCAGGGACGGCTTTGATCGAGGTGGAATGATGCATCGTGGCCGTGGAGGCATGGGCCGTGGCATGGGCAGCGCTGGAGACAGAGGTGGCTTCAGTAAGCCTGGTGGACCTATGAACAGCGACGAGCGTGAAACTGGACGCCCTGAAGAGCAGGATGACTCTGAGAACAGCACAATCTACATCACAGGATTGACTGAGAAGGCTAACCTGGAGGAGATGGCTGAATTCTTTAAACACGTTGGCCCGATTAGGATTAACCGCAGACTTGGCCAGCCTGCCATtaacatatacacagacaagGACTCAGGAAAGCCCAAGGGAGATGCCACCCTATCCTATGAGGAGCCCGTCTGTGCCAAAGCAGCTGTAGAGCATTTTGATGgAAAGGAGTTCCAAGGCCGAAGGCTTAAGGTGTCCATGGCACGCCGTAAGCCCATGATGGGTGGAATGAGGGGTGGCATGCCCATGCGAGATGGCATGATGGGCCGTGGAGGTATGATGGGCCGTGGAGGTGACCGTGGCGGGTTCATGCCACGTGGTGGTCCTCGTGGTATGGGCAGAGGTGGACCCACAGGAGGCAACATGCAGCAGAGAGCTGGGGACTGGGAGTGTCCTAACCCGGGTTGTGGTAACCAGAACTTTGCCTGGAGGATGGAGTGTAACCAGTGCAAAGCCCCCAAGCCAGAAGGGTTGGGCGGTGGCCCTCCCTTCCCCCCTGGAGGTGACAGAGGCAGAGGGGGAATGGGAATGCGTGGAGGCAGAGGCATGGACCGTGGTGGGCCCGCAGGAGCTGGAGGCCCTGGTGGTCCCGGAGGTTTCCGTGGAGGTTGGGGAGGCGACCGTGGTGGATTCAGAGGACGTGGTGGAATGGACAGGGGAGGTTTCCGAGGGGCCGGGCGTGGAGGACCACCTATGGACCGAATGGGTGGCAGAGGTGGAAGAGGAATGGGCCCTCCAGGTGGCAAGATGGATATGAGggacCATCGTCAGGAGCGCAGGGAGCGACCCTACTGATGGAGAACTTCTTGATTGTTCCTCTTGTGgaatttgatttttaaaataaaaaattttaatttatgATTCCATATTTCGGTGGTTATAGAACTGCTTTCAAACATCCTGTGCAGTTTCATTGAactcatttccatttttttttagtttaccCATGTTTATGCCACATCTTGTATTGTgcacgttttgttttttttaaatatgctgaTTAGGTTTGACATTGTGTTGTaaaatgctttttctttttttttttttcctcatttgttTA
>XM_039802293.1
gtgttttctgcGAACAGAAAAACGTTTCTCCAGCAGCCAACCTTCTCCAGTCGTCTTGTACAGGCACACTAAAATGGCGTCAGCTCCGGCAGATTACAGCTCCTACAGTCAGACCACTGCTCAGCAGGGGTATGCCTCTTATGCTGCCCAGCCCTCACAAAGCTATGGACAGTCTGCAGCACAGAGCTATGGTCAACAGAATTATGGATCATATGCccaacctgctgctgctgacggCACTTACACCCAGACAACACCTGCCGCCGCAGGCTACactcagcagcagcaacaacagtatGGGTCCTCGTACACCCAGCCAGCAGCAGCTGGCTATCCTGCTGCCCAGTCGACCACTCATGCCTACTCCCAGTCAACCCAGGGTTATGGAGCCAGTGGTTATGACAGtactcctgctgctgctgctccagctGCCTCCCAGTCTTACGGCTCTCAGCCAGGGTATACTGCCCAGTCTGCCTACCCTGGTTATGGCCAGCAGGCTGCTCCCACTGCACCGCAGAGTTACAATGCTAGCAGCCAGCCAGCCACTTACAACCAAAGTAGTTACTCCCAGCCAGCAGCATATGGCCAGCAACAGTCAGGCTACCAGGCTGCGCAGGCAAGCTACGGTCAGCAGGGCTACCAGCAACAGTCCCAGCAGCAGTCCCAGGCTCCTCCTGCTTACCCTCCTCAGGCTTCTGGTTCCTATGGGCAGCCTCCAGCCAATCAGTACAGTCAACAGGGTGGACCTCCCAGTTACAACCAGTCCAACCATTACAATAATTACAGACAGGATGGCCAGGGTGGAGGTTCTGGTTACTCTGGCTCTGAGTCTTCAAGGTACTCTGGGTCAGGGGAGAACAGAGGCAGGGACGGCTTTGATCGAGGTGGAATGATGCATCGTGGCCGTGGAGGCATGGGCCGTGGCATGGGCAGCGCTGGAGACAGAGGTGGCTTCAGTAAGCCTGGTGGACCTATGAACAGCGACGAGCGTGAAACTGGACGCCCTGAAGAGCAGGATGACTCTGAGAACAGCACAATCTACATCACAGGATTGACTGAGAAGGCTAACCTGGAGGAGATGGCTGAATTCTTTAAACACGTTGGCCCGATTAGGATTAACCGCAGACTTGGCCAGCCTGCCATtaacatatacacagacaagGACTCAGGAAAGCCCAAGGGAGATGCCACCCTATCCTATGAGGAGCCCGTCTGTGCCAAAGCAGCTGTAGAGCATTTTGATGgAAAGGAGTTCCAAGGCCGAAGGCTTAAGGTGTCCATGGCACGCCGTAAGCCCATGATGGGTGGAATGAGGGGTGGCATGCCCATGCGAGATGGCATGATGGGCCGTGGAGGTATGATGGGCCGTGGAGGTGACCGTGGCGGGTTCATGCCACGTGGTGGTCCTCGTGGTATGGGCAGAGGTGGACCCACAGGAGGCAACATGCAGCAGAGAGCTGGGGACTGGGAGTGTCCTAACCCGGGTTGTGGTAACCAGAACTTTGCCTGGAGGATGGAGTGTAACCAGTGCAAAGCCCCCAAGCCAGAAGGGTTGGGCGGTGGCCCTCCCTTCCCCCCTGGAGGTGACAGAGGCAGAGGGGGAATGGGAATGCGTGGAGGCAGAGGCATGGACCGTGGTGGGCCCGCAGGAGCTGGAGGCCCTGGTGGTCCCGGAGGTTTCCGTGGAGGTTGGGGAGGCGACCGTGGTGGATTCAGAGGACGTGGTGGAATGGACAGGGGAGGTTTCCGAGGGGCCGGGCGTGGAGGACCACCTATGGACCGAATGGGTGGCAGAGGTGGAAGAGGAATGGGCCCTCCAGGTGGCAAGATGGATATGAGggacCATCGTCAGGAGCGCAGGGAGCGACCCTACTGATGGAGAACTTCTTGATTGTTCCTCTTGTGgaatttgatttttaaaataaaaaattttaatttatgATTCCATATTTCGGTGGTTATAGAACTGCTTTCAAACATCCTGTGCAGTTTCATTGAactcatttccatttttttttagtttaccCATGTTTATGCCACATCTTGTATTGTgcacgttttgttttttttaaatatgctgaTTAGGTTTGACATTGTGTTGTaaaatgctttttctttttttttttttcctcatttgttTA

Function

symbol description
ewsr1 Enables identical protein binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Located in nucleolus and nucleoplasm. Implicated in Ewing sarcoma.

NR:

description
PREDICTED: RNA-binding protein EWS isoform X2

GO:

id name namespace
GO:0021954 central nervous system neuron development biological_process
GO:0003676 nucleic acid binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K13209 EWSR1; RNA-binding protein EWS

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802290.1 True 2146 mRNA 0.54 15 19364007 19372609
XM_039802291.1 False 2142 mRNA 0.54 15 19364008 19372609
XM_039802292.1 False 2094 mRNA 0.54 15 19364056 19372609
XM_039802293.1 False 2144 mRNA 0.54 15 19364006 19372609

Neighbor

gene id symbol gene type direction distance location
emid1 emid1 coding upstream 6860 19298555 ~ 19357146 (+)
dnah10 dnah10 coding upstream 67332 19269536 ~ 19296674 (+)
atp6v0a2b atp6v0a2 coding upstream 94978 19256786 ~ 19269028 (+)
tctn2 tctn2 coding upstream 108078 19251176 ~ 19255928 (+)
limk2 limk2 coding upstream 137081 19207779 ~ 19226925 (+)
gas2l1 gas2l1 coding downstream 3585 19376194 ~ 19399253 (+)
ap1b1 ap1b1,LOC102786025 coding downstream 27274 19399883 ~ 19427717 (+)
osbp2b LOC104966002,LOC107394196,LOC103353525 coding downstream 81639 19454248 ~ 19504544 (+)
si:ch211-102c2.8 NA coding downstream 145567 19518176 ~ 19532323 (+)
tcn2 NA coding downstream 163693 19536302 ~ 19540034 (+)
LOC120560789 NA non-coding upstream 210422 19151533 ~ 19153584 (+)
G62836 NA non-coding upstream 277144 19084934 ~ 19086862 (+)
G62796 NA non-coding upstream 381383 18966083 ~ 18982623 (+)
G62755 NA non-coding upstream 499199 18864575 ~ 18864807 (+)
G62741 NA non-coding upstream 590898 18772755 ~ 18773108 (+)
G63005 LOC104920315,LOC103374896,LOC100704901 non-coding downstream 176801 19549410 ~ 19554906 (+)
G63007 NA non-coding downstream 182774 19555383 ~ 19562350 (+)
G63015 LOC107394186,LOC104941583 non-coding downstream 202952 19575561 ~ 19633642 (+)
G63016 NA non-coding downstream 209363 19581972 ~ 19584473 (+)
G63029 NA non-coding downstream 283623 19656232 ~ 19656496 (+)
tmem119a LOC103353570,LOC104946818 other upstream 282352 19076561 ~ 19081654 (+)
mvk mvk,LOC102798305 other upstream 621607 18737518 ~ 18742399 (+)
acacb acacb other upstream 678543 18661157 ~ 18685463 (+)
tpcn1 tpcn1 other upstream 889275 18441347 ~ 18474731 (+)
tbx5b tbx5,LOC103470367 other upstream 944416 18407348 ~ 18419590 (+)
rasl10a rasl10a other downstream 57792 19430401 ~ 19448950 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 386987 19759596 ~ 19763524 (+)
vps13a vps13a other downstream 1028338 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 1101042 20473651 ~ 20490586 (+)
G63480 rbm19 other downstream 1303808 20676417 ~ 20677916 (+)

Expression


Co-expression Network