atoh1a


Basic Information

Item Value
gene id atoh1a
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 22758111 ~ 22760837 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802296.1
GAATGCAGCCTTGCACAGCGCACAGGAACCAGTTCAGACAGTTGAGGATGGCCAATTAACCCTTTTCGGATCTATCGTCTTCCTTCCCCCCCTCTTGCGATGTGACAGACACACGAACAGGTGGGATTCTGTCCCAGCTGCGCACGTCTCGCGCTGTCCACGCTGCCCCCATGCACGTGCGTCCTGTGGGAGGTTCCCCTTACCTCCCTTTGGTTAAACACTCCTTAAACTGTAACGTTATCATAAACAGTCCGGCTTCGGGGGGCCATAATCACCTCTCTCGGGCCTTAGCGAGACTTCTCATTGGACGTCAACACGCGACCAGCGCGAGGAGGGGGGCTCCCAGACGCGTGCCGCCATTTAAACGGACGCCGCGCCTTGAGACACCAGAAAAGTAGTCTCGCACGCGACAGTCATTTTCACGCAGTGCAACAAGCATAGTAGTGCGTGACTCCAAaaactttttcattttattttattttttaaatattgttagTCGTTTTAACTTTACCTACCTTTTGGGGTCATTTGGAAGCATGGATGTCCGAAGTGTGGAAGACTGGAGCAGAGGCGCAGTCCTTGACCCGCGGCTGCAGAGCCCAGAAGTGGTGAAGAGGGGAGGGGAGCAGCAGCTCGAGGAGCCCCACCACCACGAACCTGGACTGACGCTCGTGGACAGCGGCAGTGACCCACGCGCCTGGCTGGCTCCAGTGCAGCCTTCTGGCACCTGCGCGGCACACGCCACTTCACCCGACTACCTGGGGCATTCGCCCTGCCCGAGCACCGGCTCCTACCACGagAGTGGTTCCCCGGAGTCCTCGGGCTATCCCAGCCCTCCCAGCTACAGAAAAACTACCAAGagcccctcctcttcctcgctCAAAGTCAGGGACTTGTGCCGTCTTCAAGGCACGGTCACCGGGCCCGATGAGGAAACATCCACGAGACAGAGAGCCCAGTCTAGCAGACCTACCAACGGGGTCCAGAAGCAGAGGCGCGTGGCCGCCAACGCGCGCGAGAGGAGGCGGATGCACGGGCTCAACCACGCGTTCGACGAGCTGCGCAGCGTAATCCCGGCGTTCGACAACGACAAGAAGCTCTCCAAATATGAAACTCTACAGATGGCGCAGATCTACATCAACGCTCTGGCTGATCTGCTGCAAGGTCCAGTCTCCAACAACAGCAATAGCGAAGtatccaacaacaacaacaacaacaacaactcgcCAAAGTGTGACAATATGCTTGCATCCGCCGATGTTTTAGACGGGGCAAAAGACAGGGCTTCCCCGTCCCCTACAGCGTGTAGGACAGCGGCGGCTGAGCCCGCCTCAGGTAGCAGCCTACCTGTCCACATCAGCGGGGTGCCATTCCGCTCCTCCTTCGACGACGGTTCGTTTTCGGCCATGGTTGAAGAAGCGATGCGTTCGccctctccttcttcctccacTCGGGCAGGAAGTTCGCTCGCACCGGTCGGAGGTAGGAGGAAAGAGTCTCCCCGGAGCGACGGAGAGTTTTCCCCGCACTCCCACTTCAGTGACTCGGATGAAATAGCGATGGAGCTCCACTCAAGTGAAGAAGATGACCTCTCAGAACTCAAGCTGCGCAGCCACCATAACCATCATCTTCATCGTCATCACACTGTTGCTTTCTgaatgattaaaaataaaaaataaaataacagactATATTAAAGGTTCACTATAGCCTACAACAAAATAATTGTCCGTAAACCGTGTCAATCATGTAGTCTGTTCTGTTTTAAATGTCGTTTTAAGAGGATGgacttttttgctttttcaaaaaagtcgtgttcaattttttttaacaacaattttattttatcaacTTCTTACAtagtcttattattattattattattttttctgaaATAGGCTTAATTCGGTTCTGCCAATAGATGTAGCCTATAGCCTATAATTTCCCGTTTCCATGGAGACGTGTCTGGAAGACCCCTCTGCCATGTCGCGCGCAGCACTGCCATGGGTATTTCCCACGCCACTCCGACCAAAAAGCTGTCTTCCACAAAATCATAACTTTATGGATAATTGCTTAGCCTATATTTGATAATGTAAACAATGTTTGTAGCTctaatatgatttttttgttttgatttatattttgattTGTTAATTTGTATGTAGGCTATAATGTATTTTGCAACTTCAAAAGTTAACAATGTGCACTTTAAAAATATATGAGCCAGAGGCTTACGAAATACGATTTGTGTTTTCAAACCATAAACAATATTGTTGTGCTTTGTTTGATAGTGTAGTACTGCCAATTCCATACAAATAGCCTATTTAAATGTAGCCATCATTGCTGCCttcttttgtattttcttttgtatCTTCAGATGAACTTGTGTGTCTTTTGCTTTCACTGGATGAGATAAATTGACATGTAT

Function

NR:

description
PREDICTED: protein atonal homolog 1

GO: NA

KEGG:

id description
K09083 ATOH1_7; atonal protein 1/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802296.1 True 2428 mRNA 0.49 2 22758111 22760837

Neighbor

gene id symbol gene type direction distance location
grid2 grid2,LOC102784241 coding upstream 3361 22123035 ~ 22754750 (+)
ccser1 ccser1,LOC102783788 coding upstream 636796 21991353 ~ 22121315 (+)
trim36 trim36 coding upstream 768529 21955578 ~ 21989582 (+)
pggt1b pggt1b coding upstream 806198 21937000 ~ 21951913 (+)
LOC120560655 ccdc112 coding upstream 821331 21930173 ~ 21936780 (+)
smarcad1a smarcad1 coding downstream 30701 22791538 ~ 22811392 (+)
tspan36 LOC104956296 coding downstream 65789 22826626 ~ 22835070 (+)
mapk4 mapk4 coding downstream 79665 22840502 ~ 22861873 (+)
me2 me2 coding downstream 101747 22862584 ~ 22883874 (+)
elac1 elac1 coding downstream 123751 22884588 ~ 22891019 (+)
G63792 NA non-coding upstream 607987 22131884 ~ 22150124 (+)
G63715 NA non-coding upstream 882424 21875445 ~ 21875687 (+)
G63714 NA non-coding upstream 912973 21844832 ~ 21845138 (+)
LOC120560273 NA non-coding upstream 1137400 21608823 ~ 21620711 (+)
G63641 rmi1,LOC102777824,LOC104967280 non-coding upstream 1139509 21616223 ~ 21618602 (+)
G63872 NA non-coding downstream 143198 22904035 ~ 22905966 (+)
G63914 NA non-coding downstream 226344 22987181 ~ 22988040 (+)
LOC120560300 NA non-coding downstream 459013 23219850 ~ 23245368 (+)
G63976 smim15,LOC106580593,LOC103398561 non-coding downstream 514083 23274920 ~ 23281109 (+)
G64026 NA non-coding downstream 669853 23430690 ~ 23432473 (+)
LOC120560787 NA other upstream 1158822 21588876 ~ 21599289 (+)
G63480 rbm19 other upstream 2080195 20676417 ~ 20677916 (+)
wdr31 wdr31,LOC102796061 other upstream 2267525 20473651 ~ 20490586 (+)
vps13a vps13a other upstream 2316018 20400947 ~ 20442093 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other upstream 2994587 19759596 ~ 19763524 (+)
G63905 NA other downstream 169062 22929899 ~ 22930205 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other downstream 727130 23487967 ~ 23562285 (+)
G64108 NA other downstream 931825 23692662 ~ 23693291 (+)
prxl2c aaed1 other downstream 2060477 24821314 ~ 24823066 (+)
cdc14b cdc14b,LOC102776968,LOC103141798,LOC106948523 other downstream 2062881 24823718 ~ 24837448 (+)

Expression


Co-expression Network