myo1ha (myo1h,LOC104945027,LOC102796924)


Basic Information

Item Value
gene id myo1ha
gene name myo1h,LOC104945027,LOC102796924
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 18704132 ~ 18715310 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802308.1
tttggaTCCTCATTTAAATTCTGTATCTGACAGCAGAACAATACAACTTCAGAAATGCAgGGTCAGCTGGACATGGAGGGCGCCCTGACTGCCAGGGACCGGGTTGGAATCCAGGATTTTGTCCTCCTGGATGAAACCACAGAGGCAGCCTTCCTCAGTAACCTCAAGAAACGTTTCAGCAAAGATCTCATCTATACCTATATTGGCACATTGCTAGTGTCTGTGAATCCATACAAAGAGCTGGACATCTACAATATGAAACAGATGGATCTCTACATGGGTGTCAACTTCTTTGAGCTTCCACCACACATCTATGCCTTGGCAGACAACGCCTACCACACCATGCTGACAGAGTTCAACAATCACTTCATCCTCATCTCTGGAGAGAGTGGAGCAGGGAAGACGGAGGCCTCCAAAAAGATTCTGCAGTATTACGCTGTCAGCTGTCCGAGCACCACTCTGCTAAACACCGTCAGGGACAAAATGCTCATGTCTAACCCTGTCCTCGAGGCTTTCGGCAATGCCAAAACACTGAAAAATTACAACTCAAGTCGGTTTGGGAAGTATATGGACAttcagtttgacagccagGGGGATGCTGTCGGAGGCCATATCCTGAACTACATGCTGGAGAAGTCGAGGGTTGTGCATCAAAATCACGGGGAGAGAAACTTCCACATCTTCTACCAGCtagtggagggaggagaggaggacctACTGCACCAGCTGGGCCTGGAGAGAGACAGCCAGCATTACAATTACCTAACccaaGGAGAGTGTGCCATTGTGTCTTCCATTAATGACAGAAATGACTGGAAAACGGTCAAAAACGCACTTCAAATCATCAACATTGATGAGATTAACACTAATCACTTGTTTGGGACCGTTGCAAGCGTTCTCCACTTGGGGAATGTGCAGTTTGACTCCGACAGTAAAGGCCATGCCCTCTTGAACAGCAACAATTCAGAGCTGCGCTGGGTCTCAAATttaCTAGGAGTTGATGCTCACCGTCTCCAAGAGGGACTCACATACAGGAAGATTGAAGCCCAAAAAGATCAGATCCTTAGCCCATTCACAATCGATCATGCCATCTATGCCAGGGATGCCCTGGCCAAAGCCATATATGGACAGACCTTCACCTGGCTGGTCAACAGGATCAACGAGTCCATAGAGAACAAGGACTCTTCAAGGAAGACTGTAATAGGGCTTTTGGACATATATGGATTTGAGGTTTTCTATGTTAACAGTTTTGAGCAGTTCTGTATAAACTACTGCAAGAAGCTGCAGCAGCTTTTTATCCAGTTGACACTTAAGGCTGAGCAGGAGGAATATCAAGCAGAAGATATTGAGtgGGAGCCAGTCCAATTCTTCAATAACAAGATCATCTGTGACCTGGTTGAGGAGAAACACAGAGGGATCATATCAATATTGGATGAGGAGTGTCTCAGGCCGGGAGATGTCACAGACCTCACCTtcctggagagactggaagaaaAGATGGGAAATCATCCTCACTTTGTCACGCACAAACTGGCTGACAAAATGACACGCAAGACTCTGGAGAGGGGAGATTTCCGTCTCTTGCATTATGCCGGGGAGGTCACCTACTGCGTTGTGGGTTTCGTGGACAAAAACAATGACCTGTTATATAAAAGCATTAAAGATCTGATTTGTCAGTCTAAAAATGCTATTGTCCGAGAGTGCTTCTCCACAATGGATCCAGACAGCAGGCGAAGACCAGAAACAGTGGCGACCCAGTTTAAGAGCAGCCTGCTGAAGCTGACAGAGATCCTCATGGCTAAAGAGGCCTGGTACATACGCTGTCTAAAATCCAATGAGTCCAAGCAGCCAGGTCAATTTGACGAAGCTCTGATCAGGCACCAGGTGAAATACCTGGGCCTGATGGAGCACCTCAGAGTCAGACGAGCTGGTTTTGCATACAGACGCAAATTTGAGGTATTCTTAAAGAGATATAAACCCCTGTGCCCAGCCACCTGGCCTCACTGGAGAGGAGTGCCTGCTGATGGAGTAGAAGTGCTGGTTCAACATCTGGGCTACCTGCCAGATGAGTACAAAATGGGACGTACCAAAATATTCATCCGTCATCCAAGGACACTTTTTGCCACAGAGGATGCTTTTGagaaatgtaaacatgaacTGGCGACGAAGCTCCAAGCCAAATACAAAGGATACAAAGCAAAGGGAGAAttcaaaaaacagaaagaagctGCCACTAAGATTGAAACCTGCTGGAGAGGAGCGCAGGCTAGAAAGGAGAGAGATAAGAGAGCCTGGGCTGTAAAAGTCATCAAGAAATTCATCAAAGGTTACATGACCAGAGGGCAAGCAAAAAGCACAGATAACTCGGAGTACCTGGCCTTTGTGAGACAAAATTACTTAAACAGGCTCAAAGGCAACCTGCCAAAGACAGTTTTGGATAAAACCACCTGGCAAACTCCACCAGCTGTGCTGACAGAGACATCAGAGATACTGCGTAAGCTTTACTACCGTCTTATGGTGCGGAAGTATGTGAGAGGAATCACACCCCAGAAAAAAGCTCAGTTTCAACTGAAGCTTCTTACCAGCTCTATCTTCAAGGCCAAAAAGGATAGTTATCCACAGAGTGTCGCTCAGCCTTTTGTGGACACCAGAATCAGTGAACAAGACATAAACATGAAGGTTCTCCAGATGATACGCAATGAGCACATTAAGTACAGTGTCCcggtgattaaatatgataggAATGGTTTCAAACCAAGACCACGACAGCTCATCCTCACCAAGACAGCTGCCTATGTGATAGAGGAAGCCAAGATCAAACAGAAAGTTCTGTATACCTCTCTTAACGGGATTTCGGTCAGTAACTTGACTGATGGCATGATTGTATTCCACATAACATGCGAGGACCGTAAACAGAAGGGGGACCTTGTAATTCAGTGTGACCACTTGTTTGAGTCTTTGACCAAACTCGCTGTCATTGCTAACAAACAGAATGCAATTAAAGTGGTTCAGGGCAGCATCAAGATTGAAATCCAGGCAGGTAAAGAGAGTGCGGTGGACTTCAGCACTGGACAGGAACCCATGGTTTACAAGGCCAAGAACGGACATCTCATGGTGGTTGCCACTCGGGCTCGGACACGGTAACGTGTGTGGGGTTGAGAAGACACACAAGAAGCCCCTGCATATTTCATCAGGAGACCCCTAAGGGAAGATCAACGTGTATACAGGAAACCCAACTGACAAGAAGAGAACCCCAGGATGAGCTTGCTTTGTTGTACAGCAACACATTTCTCATGTATGCATTAGTCAATGATGAATTTTACTTTTCCACCAAAGAATATTAACCTCTCATGAGAGGCTAAGGTTTTAACATAATTCTGTGTTTGAGGATTTGCATCTGCTGTTTTGAGCACTAAAGTTCAAAGCAAAGCCTTAAATTGCACTGCATATCTACAAAACTATTCTAATGTACAGAACACTTTAAC

Function

symbol description
myo1h Predicted to enable actin filament binding activity and microfilament motor activity. Predicted to be involved in actin filament organization and vesicle transport along actin filament. Predicted to be part of myosin complex. Predicted to be active in several cellular components, including actin cytoskeleton; microvillus; and vesicle.

NR:

description
PREDICTED: unconventional myosin-Ih-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0003774 motor activity molecular_function

KEGG:

id description
K10356 MYO1; myosin I

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802308.1 True 3485 mRNA 0.46 33 18704132 18715310

Neighbor

gene id symbol gene type direction distance location
p2rx2 p2rx2 coding upstream 61695 18637694 ~ 18642437 (+)
si:dkey-98f17.5 LOC103357465,LOC102303189,LOC102202618,LOC102793122,LOC101475617 coding upstream 116417 18574988 ~ 18587715 (+)
cfap73 NA coding upstream 266942 18432817 ~ 18437190 (+)
si:ch211-204d2.4 plekha2 coding upstream 303391 18389111 ~ 18400741 (+)
si:ch211-113d22.2 LOC106098714,LOC103357453,LOC102788116 coding upstream 317879 18382949 ~ 18386253 (+)
ube3b ube3b coding downstream 5424 18720734 ~ 18729940 (+)
aldh3b2 LOC103470338,LOC103357480,LOC106944551,LOC103142889,LOC106918406,LOC107097252,LOC101157544,LOC100709454,LOC102306236,LOC104945033,LOC105926931,LOC108234466 coding downstream 14906 18730216 ~ 18736475 (+)
fam222a fam222a coding downstream 78940 18794250 ~ 18841202 (+)
LOC120560157 tchp,LOC102799482 coding downstream 156972 18872282 ~ 18878090 (+)
ankrd13a ankrd13a coding downstream 181313 18896623 ~ 18904773 (+)
G62667 NA non-coding upstream 66911 18636726 ~ 18637221 (+)
G62656 lztr1 non-coding upstream 86563 18617074 ~ 18617569 (+)
G62613 NA non-coding upstream 172821 18531010 ~ 18531311 (+)
G62560 NA non-coding upstream 201757 18501762 ~ 18502375 (+)
G62559 NA non-coding upstream 203626 18500125 ~ 18500506 (+)
G62732 NA non-coding downstream 32180 18747490 ~ 18748496 (+)
G62741 NA non-coding downstream 57445 18772755 ~ 18773108 (+)
G62755 NA non-coding downstream 149265 18864575 ~ 18864807 (+)
G62796 NA non-coding downstream 250773 18966083 ~ 18982623 (+)
G62836 NA non-coding downstream 369624 19084934 ~ 19086862 (+)
acacb acacb other upstream 18669 18661157 ~ 18685463 (+)
tpcn1 tpcn1 other upstream 229401 18441347 ~ 18474731 (+)
tbx5b tbx5,LOC103470367 other upstream 284542 18407348 ~ 18419590 (+)
G62513 NA other upstream 372902 18330705 ~ 18331230 (+)
setbp1 setbp1,LOC102781608 other upstream 575063 18074768 ~ 18129069 (+)
mvk mvk,LOC102798305 other downstream 22208 18737518 ~ 18742399 (+)
tmem119a LOC103353570,LOC104946818 other downstream 361251 19076561 ~ 19081654 (+)
rasl10a rasl10a other downstream 715091 19430401 ~ 19448950 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 1044286 19759596 ~ 19763524 (+)
vps13a vps13a other downstream 1685637 20400947 ~ 20442093 (+)

Expression


Co-expression Network