LOC120560140 (LOC103357464,LOC100710522,LOC102203382,LOC101474823,LOC102301779)


Basic Information

Item Value
gene id LOC120560140
gene name LOC103357464,LOC100710522,LOC102203382,LOC101474823,LOC102301779
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 18564189 ~ 18572337 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802329.1
TACAATAGGCTGCCATTATGCAAGTGCTTCGACTGAAGTGGAACATCTATTATAAGTAGTCCATTCAAACATTATTTTACGACAGCTTCCAAAATGAGCATCTATGAGGAGTCTACGCAATCAAAGAAAGAGTTTCCCAACAAATCACTTCTGCTGGCTGCGTGTGCTGCGTGTATAGGGGGAACCTTTCAGTATGGATATAATATATCTATCATCAATGCTCCCACAATGCATGTGCAGAATTTCATCAACCAAACCTGGAGGGAGCGTTACCAAACTGACATATCAGCAGATGTTCTCACCCTGCTTTGGTCCACTATTGTGTCTATATTCACCATAGGAGGACTTCTAGGAGTGACAGTCGGTGGGACATTATCTGTGAAGCTGGGGAGGAAAGGGACGCTGTTGGCCAATAATATATTTGCATCAATGGCTGCTCTGCTAATGGGTCTAAGTTACCCTACAGGATTATTTGAATTACTCATCATTGGACGTCTTCTCACTGGAATTAATGCAGgCATTGGCCTTTGTGTTCAACCTCTGTATTTGGGTGAAATAGCTCCAACTGCATTTCGTGGTGCCATGGGAATGGGAACTTCTATTTTCATCACTGGTGGGATCTTGACTGGACAAGTGATTGGCCTCAAAGAGCTCCTGGGTAAAGAAGAGCACTGGCCCATCCTGCTCTCCACCACATGTATCCcagcattgctgcagctcctgatCCTACCCTGGTTCCCAGAGAGCCCGCGCTACCTGCTCATTGACAAAGGAGATGATGAGGGATGTAAGAAAGCCCTGAAGCAACTTCATGGTATAGCTGGCTGTGATGGCGAATGGGCGGATATCGAGAAGGAGAAAAATAATTTTGTGGATTTCCAAGCCAAGAAACCCTGGGAGCTCTTGACTGATCGTAGTGTCCGCAGGCAGCTTCTCACCATCTTGCTGCTCAACGCTGCACAACAGCTGAATGGCATCAATGCTATTTACTTCTACGCAAATTACTTGTTCAGACAATCTGGTATCCCCGCTGATAAAATACCATATGTGACCGTTGGCACTGGTGCCTGTGAATGCATCACAGCTTTAACATGTGGTATGCTCATTGATCGTCTGGGAAGGAAAGTGCTCATTACGGGAGGATACACACTGATGAGTATCTGCTGCATTTTATTCACGCTGACGCTCTCTTTCCAGgATGCCAGCCCAGTATTTCCATACATGAGCatggtgtgtgtatttgctttTATCCTGAGTTTTGGCTTAGGACCAGGTGGCGTGACAAACATTTTGACCACTGAGCTATTCACACAAACGGCACGGCCTGCAGCGCACATAATTGCAGGATCATTGAACTGGTTGAGCTTCTTCTTTATCGGCCTGGGCTTCCCTTTTATTGTGATTGGGCTGCAGCAGTACTGTTTCCTGGTGTTCCTGGCCGTCTGCTCCTTAATGGCGATatacattttcctttttgttcCTGAAACCAAGAACAAAACCTTCGTGGAAATCCAGAATGAGTTTCAGTCCAGAAAGGCCCGCAGTGCTGATGGGGCAGGGACGACACTGTTATCCACTTTTATAtgaaatccatccatccatcttcgtccgcttatccggtgtcaggtcgcggggggagcagctcaaGCAGGGGACctcaaacttccctttcccgagcaacattaaccagctccgactagGGGATCCCGAGTCGTTCTTTTATAGGaaatcaattaaaaaatgttatgTCTCACAATATTTACATTATGTCACAAAGATGAGTAACTAAAAATGAGGATTTATAGTCCACATACGCACAACAAAATAGATGAGATACTGTGAATTTCAGAGATGTAGGCTTTACCGGGTAGCCATAATTACGTCTTTTTAGTTCACTTACAGATATAGCCGCATAAATCAAAGTTATCttaatttgtaatattttgGTATGATCAATGTTGGTTTGTATAACTTTTATAAAGAGTGCTCTATTGAGACTTTTCAATAAAGATCAATTTATTAAAAGCAAGCTTATGCTGTATTAGTGAACTTACAACTA
>XM_039802330.1
ACAATAGGCTGCCATTATGCAAGTGCTTCGACTGAAGTGGAACATCTATTATAAGTAGTCCATTCAAACATTATTTTACGACAGCTTCCAAAATGAGCATCTATGAGGAGTCTACGCAATCAAAGAAAGAGGATTAACTCATCCGCCCGTCATGATTTAATTTGAGAGCAAACTCTATACATGGATACAAGGATAGACCTACTCAACGACAAACTACAAACAATATTGGACTTTAAACAAAACATCAGcaacaaaatgttaaaagaatTTGCGGATGAATATCAACCTTTGCTTATTAAAGAAACCAAAGATTAAAAGCAACCCAAGTTTCCCAACAAATCACTTCTGCTGGCTGCGTGTGCTGCGTGTATAGGGGGAACCTTTCAGTATGGATATAATATATCTATCATCAATGCTCCCACAATGCATGTGCAGAATTTCATCAACCAAACCTGGAGGGAGCGTTACCAAACTGACATATCAGCAGATGTTCTCACCCTGCTTTGGTCCACTATTGTGTCTATATTCACCATAGGAGGACTTCTAGGAGTGACAGTCGGTGGGACATTATCTGTGAAGCTGGGGAGGAAAGGGACGCTGTTGGCCAATAATATATTTGCATCAATGGCTGCTCTGCTAATGGGTCTAAGTTACCCTACAGGATTATTTGAATTACTCATCATTGGACGTCTTCTCACTGGAATTAATGCAGgCATTGGCCTTTGTGTTCAACCTCTGTATTTGGGTGAAATAGCTCCAACTGCATTTCGTGGTGCCATGGGAATGGGAACTTCTATTTTCATCACTGGTGGGATCTTGACTGGACAAGTGATTGGCCTCAAAGAGCTCCTGGGTAAAGAAGAGCACTGGCCCATCCTGCTCTCCACCACATGTATCCcagcattgctgcagctcctgatCCTACCCTGGTTCCCAGAGAGCCCGCGCTACCTGCTCATTGACAAAGGAGATGATGAGGGATGTAAGAAAGCCCTGAAGCAACTTCATGGTATAGCTGGCTGTGATGGCGAATGGGCGGATATCGAGAAGGAGAAAAATAATTTTGTGGATTTCCAAGCCAAGAAACCCTGGGAGCTCTTGACTGATCGTAGTGTCCGCAGGCAGCTTCTCACCATCTTGCTGCTCAACGCTGCACAACAGCTGAATGGCATCAATGCTATTTACTTCTACGCAAATTACTTGTTCAGACAATCTGGTATCCCCGCTGATAAAATACCATATGTGACCGTTGGCACTGGTGCCTGTGAATGCATCACAGCTTTAACATGTGGTATGCTCATTGATCGTCTGGGAAGGAAAGTGCTCATTACGGGAGGATACACACTGATGAGTATCTGCTGCATTTTATTCACGCTGACGCTCTCTTTCCAGgATGCCAGCCCAGTATTTCCATACATGAGCatggtgtgtgtatttgctttTATCCTGAGTTTTGGCTTAGGACCAGGTGGCGTGACAAACATTTTGACCACTGAGCTATTCACACAAACGGCACGGCCTGCAGCGCACATAATTGCAGGATCATTGAACTGGTTGAGCTTCTTCTTTATCGGCCTGGGCTTCCCTTTTATTGTGATTGGGCTGCAGCAGTACTGTTTCCTGGTGTTCCTGGCCGTCTGCTCCTTAATGGCGATatacattttcctttttgttcCTGAAACCAAGAACAAAACCTTCGTGGAAATCCAGAATGAGTTTCAGTCCAGAAAGGCCCGCAGTGCTGATGGGGCAGGGACGACACTGTTATCCACTTTTATAtgaaatccatccatccatcttcgtccgcttatccggtgtcaggtcgcggggggagcagctcaaGCAGGGGACctcaaacttccctttcccgagcaacattaaccagctccgactagGGGATCCCGAGTCGTTCTTTTATAGGaaatcaattaaaaaatgttatgTCTCACAATATTTACATTATGTCACAAAGATGAGTAACTAAAAATGAGGATTTATAGTCCACATACGCACAACAAAATAGATGAGATACTGTGAATTTCAGAGATGTAGGCTTTACCGGGTAGCCATAATTACGTCTTTTTAGTTCACTTACAGATATAGCCGCATAAATCAAAGTTATCttaatttgtaatattttgGTATGATCAATGTTGGTTTGTATAACTTTTATAAAGAGTGCTCTATTGAGACTTTTCAATAAAGATCAATTTATTAAAAGCAAGCTTATGCTGTATTAGTGAACTTACAACTA

Function

NR:

description
PREDICTED: solute carrier family 2, facilitated glucose transporter member 11-like isoform X1

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802329.1 False 2059 mRNA 0.44 12 18564189 18572337
XM_039802330.1 True 2254 mRNA 0.43 13 18564189 18572336

Neighbor

gene id symbol gene type direction distance location
LOC120560142 NA coding downstream 6168 18536431 ~ 18558021 (-)
LOC120560138 LOC100710522,LOC103357464,LOC102301779,LOC101474823,LOC102203382,LOC106521717 coding downstream 9625 18549347 ~ 18554564 (-)
LOC120560136 rbm19 coding downstream 59292 18497963 ~ 18504897 (-)
plbd2 plbd2 coding downstream 66328 18492742 ~ 18497861 (-)
morc2 morc2 coding downstream 76809 18470155 ~ 18487380 (-)
cldn26 LOC103357467,LOC104947832 coding upstream 38368 18610705 ~ 18611694 (-)
lztr1 lztr1 coding upstream 41133 18613470 ~ 18621154 (-)
gal3st1a gal3st1 coding upstream 50484 18622821 ~ 18628475 (-)
pes pes1,LOC101476782,LOC102794482 coding upstream 57630 18629967 ~ 18637041 (-)
pole pole,LOC102794752 coding upstream 70534 18642871 ~ 18659829 (-)
G62625 NA non-coding downstream 24174 18539126 ~ 18540015 (-)
G62630 NA non-coding downstream 28908 18534933 ~ 18535281 (-)
G62629 NA non-coding downstream 42314 18521564 ~ 18521875 (-)
G62586 plekha2 non-coding downstream 166243 18394836 ~ 18397946 (-)
G62571 NA non-coding downstream 206436 18355242 ~ 18357753 (-)
G62733 NA non-coding upstream 174856 18747193 ~ 18748609 (-)
G62771 NA non-coding upstream 264637 18836974 ~ 18845777 (-)
G62772 NA non-coding upstream 332982 18905319 ~ 18906567 (-)
G62817 NA non-coding upstream 384920 18957257 ~ 18961477 (-)
G62872 NA non-coding upstream 515426 19087763 ~ 19088373 (-)
G62626 LOC103357464 other downstream 51928 18510155 ~ 18512261 (-)
zgc:158398 NA other downstream 71782 18488162 ~ 18492407 (-)
iqcd NA other downstream 121171 18437676 ~ 18443018 (-)
G62582 LOC106098714,LOC103357453,LOC102788116 other downstream 177920 18383005 ~ 18386269 (-)
G62580 tacc1,LOC101470878,LOC102206806 other downstream 183687 18377602 ~ 18380502 (-)
mmab mmab other upstream 162571 18734908 ~ 18737406 (-)
ficd ficd other upstream 527907 19100244 ~ 19102474 (-)
si:ch211-225b11.1 LOC103353539,LOC101465611,LOC100705171 other upstream 607168 19179505 ~ 19237086 (-)
LOC120560442 LOC104920315,LOC103374896,LOC100704901 other upstream 977114 19549451 ~ 19554908 (-)
LOC120561342 NA other upstream 1139111 19711448 ~ 19731573 (-)

Expression


Co-expression Network