ppm1f (ppm1f)


Basic Information

Item Value
gene id ppm1f
gene name ppm1f
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 10807831 ~ 10968204 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802346.1
GCTTCACGTGACGCTTCaaaggaaattacatttttttttattaaaaacaattcagtacaTTACAATTTCTCGTAGAAATATTGAGTTTGCATTCCTCAACAACAATATAAACAGCTTTATTGACAATGCATAAAGATACATACATCAATAGatcaaaattaaattaaagaaaatctcatccctctaaaagcactcgtttcctctctccctgcATGAAAGGAAGCACGTTAGGGAAACGTATGCACGGAATGAAGAGACTTGGATGTACCTATGTGAATGACTAACAGAAGTTCTACTCTTTGAACCATCAGGTCTACCAGCGcagTCTCCACTTGAGACCTGTGAGCCCTGACCCGCTGTTAACTTGAGAGCTTACTGCAGCCAGAATCAgcgagatggaggaggaggccaGGTGCTTCTTGGGGAGGTTTGTGGAGGAGTTCCCGGCAGCTCTGGAGGAAGGCAGTCCACTGCCTGTCAGACCCATGAGCCGCAAAGTGTCCCTGGAGGAGCTACATGGAGAGAGTCTGGAGCTGGGCCTGAGGCTACTTGCTGCCAGGGGTGCTCCTGCAGGCCTCAGTGCGCTCCTGTGCCAGACCGCACTGTCCCAACTGCTGCAGAACGACCTTTTACCTTTCCACTGCCCCCACGAAGCTGATGACAACCAGGAAGAGGAACAGCAAGTAGTCTTGCTTCAGTCAGAGGCAGTCCAACGTCTCTTCCTTAACGAGCTGATAGATGGGGCACTAGCATGGCATCAAAACTTCCCCAAGGCCTCGCCCTCCCCCTCTCGGTTCCTCCTCTGCTCCATTCATGCCATCAAGAACACAAGAAGGAAGATGGAGGACAAACACTTGGCCCTGGCTGAGTTTAACCAGCTCTTTGGAATCCAGGATGGAGTCGAGCGTGCCTACTATGCTGTGTTTGATGGCCATGGAGGGGTGGATGCTGCCACCTTCGCTGCCACACACCTCCATGTTGCTCTGAGTAAACAGGAGACACTGCGGAGTGACACAGCCACAGCCTTTAAAACTGCTCTCAAACACACTGATGACATTTTCAAGAGCAAAGCCAAGAGAGAGcgtcTCCGGAGTGGCACAACAGCTGTGGCGGTGTTGATTCAAGGACAGGAGCTGACTGTGGCATGGCTGGGAGACTCTCAAGCAATGCTGGTCAGAAAGGGACAAGCTGTTACACTCATGGACCCCCATAAACCAGACAGAGAGGATGAGAAACAGAGAATTGAGGATCTTGGTGGCTGTATCACCTTCATGGGTTGTTGGCGTGTTAATGGCACCTATGCTGTCTCCAGAGCAATTGAGACCTGGCTGACGGAGAATGATCAGGACAACGATTTATCAATTGATGGATTTGGGGCACCTTATCGACTtgatcgagagagagagagaggtaacaGGGAAATCTCAAGGTGGCGGGGTATGTTTATATTTCAACAAACGATACTGCACTTCTGTGACTGTAAGAGAACGTATCTGTACATCAGATGTTGAACTTTTATCAGTATCGCTACGACCTTTCTATCTACCCCGTGAATTTCCACAACTTTTTATAGTCAACAATTATAAGGGCGAACGCTGCGTCGGCTTCTAACACCATCTTTGAAACCGTGCAGGAAATGCAATCACTCTCACCCGAGGCGCCAAATTTCATACTGGGTgattttaatcatgtactgtatgtctcaaGAAAACACTGACAAATTTTTACCAGTATGTTTCCTGTC
>XM_039802347.1
CTTCACGTGACGCTTCaaaggaaattacatttttttttattaaaaacaattcagtacaTTACAATTTCTCGTAGAAATATTGAGTTTGCATTCCTCAACAACAATATAAACAGCTTTATTGACAATGCATAAAGATACATACATCAATAGatcaaaattaaattaaagaaaatctcatccctctaaaagcactcgtttcctctctccctgcATGAAAGGAAGCACGTTAGGGAAACGTATGCACGGAATGAAGAGACTTGGATGTACCTATGTGAATGACTAACAGAAGTTCTACTCTTTGAACCATCAGGTCTACCAGCGcagTCTCCACTTGAGACCTGTGAGCCCTGACCCGCTGTTAACTTGAGAGCTTACTGCAGCCAGAATCAgcgagatggaggaggaggccaGGTGCTTCTTGGGGAGGTTTGTGGAGGAGTTCCCGGCAGCTCTGGAGGAAGGCAGTCCACTGCCTGTCAGACCCATGAGCCGCAAAGTGTCCCTGGAGGAGCTACATGGAGAGAGTCTGGAGCTGGGCCTGAGGCTACTTGCTGCCAGGGGTGCTCCTGCAGGCCTCAGTGCGCTCCTGTGCCAGACCGCACTGTCCCAACTGCTGCAGAACGACCTTTTACCTTTCCACTGCCCCCACGAAGCTGATGACAACCAGGAAGAGGAACAGCAAGTAGTCTTGCTTCAGTCAGAGGCAGTCCAACGTCTCTTCCTTAACGAGCTGATAGATGGGGCACTAGCATGGCATCAAAACTTCCCCAAGGCCTCGCCCTCCCCCTCTCGGTTCCTCCTCTGCTCCATTCATGCCATCAAGAACACAAGAAGGAAGATGGAGGACAAACACTTGGCCCTGGCTGAGTTTAACCAGCTCTTTGGAATCCAGGATGGAGTCGAGCGTGCCTACTATGCTGTGTTTGATGGCCATGGAGGGGTGGATGCTGCCACCTTCGCTGCCACACACCTCCATGTTGCTCTGAGTAAACAGGAGACACTGCGGAGTGACACAGCCACAGCCTTTAAAACTGCTCTCAAACACACTGATGACATTTTCAAGAGCAAAGCCAAGAGAGAGcgtcTCCGGAGTGGCACAACAGCTGTGGCGGTGTTGATTCAAGGACAGGAGCTGACTGTGGCATGGCTGGGAGACTCTCAAGCAATGCTGGTCAGAAAGGGACAAGCTGTTACACTCATGGACCCCCATAAACCAGACAGAGAGGATGAGAAACAGAGAATTGAGGATCTTGGTGGCTGTATCACCTTCATGGGTTGTTGGCGTGTTAATGGCACCTATGCTGTCTCCAGAGCAATTGAGACCTGGCTGACGGAGAATGATCAGGACAACGATTTATCAATTGATGGATTTGGGGCACCTTATCGACTtgatcgagagagagagagagACGGGAtaaaaccctggacctctgctaTGGATCTATAAAAGACGCTTACAAATCACTGCCTTTATCGCCGCTGGGTTCAGCTGACCATAACTGTGTGCATTTGCTGCCAACATATAAAACTGTCCTAAAAACACATAAAGCTCaaattaaagtaattaaagaTTGGACTGATGAATCCGTACTATGCTTACAAGATTGCTTTGATTGCACAGACTGGGAAATGTTTCAAAAGTCCTCTGGGGATGACCTAAATGAATGGACTCATGTGACATGCTCATATATTGCTTTTTGTAGAGACATGATTGTTCCATGTAAACTGGTGAAAATCTATCCTAACAACAAACCATGGATAACTAAAACTGTCAAAGATAgcttacagaaaaaaaactcatgttTTTGCTGAACTACAAATGGCAAAAAAGGATCTAAAAATAGGAATTCTCAAAGCAAAACGAGACTATAAATATAAACTGGAGAAAAAGATGGCAACAAACAACCTTGGGTCAGCCTGGGACCGTATGAAAACCATAGCAGGCCTCCAGAATCTAAAGAGCAGTAGCCCAGTCACCCTGGATGGTTTCAGCTCAGACACTGAGCTGGCTAGTGCTCTTATTCAATTTTAcaattgttttaatatttttgattttagcaatgAGATTGACAATTTGAGTAACTAGCTCGTAGACGttcaacattttaatataacGCAAACAGAAGTGCACAAAGCATTCCTCTCTATAAGAGTTAATAAAATCCACGGTCCAGATAACATCTGTGGGCGCATACTCATAACCTGTGCAAAGCAATTGagtactccttacatttttaacaagTGTTTAGAGGCACAATTAGTACCTGAGGTCTGGAAGGATGCTGTGGTTATCCCTGTTCCTAAATCACACACCACTAAAACCCTTAATGATTTTAGACCAGTGGCACTCACATCAATAGTGATGAAAGTATTTGAAAAATTGGTGAGGTCTGAAATATTAAGAAAAACGGAGCATTTACTTGACCCTCTGCAATTTGCTTATAGACCCCGTGGGGGGTGGAAGATGCCACAGTCACTTTACTAAATTTACTCTTTAAGCATTTAGATAACAATGGCTCCCATGCcagacttttatttattgacTTCTCCTCAGCTTTTAATACAATTCAACCTCATATTTTAACCACAAGGCTGCTAGAACAGTTTGATCTGAGCAATAACCTGGTAGGCTGGATCCTCAACTTTTTAACAAACAGGACGCAAAGAGTGAGAGTGAATGGCAATTTTTCTGAAAAAGTCTGTTCATCAACAGGCTCCCCACAAGGATGCGTACTCTCACCTCTGCTTTATATCCTGTACACAAATATGTGCTAGAGCAGGTGGGAAAACAGGACTATAATTAAATACGCAGATGACTCAGTAATTGTCAGCCTGCTCCAAGACAGTGAAATAGGTCACGGTCCAGTCGTCATTGACTTTGTTGAATGGTGTGAGGCGTCTCACCTTCAACTAAATgtagttaaaacaaatgacaTGCTCATTgattttaggaaaaaaaaaatccaaacacaAGAAATTACATCAATCAATGGTCAAACTGTTGAATGTGTCGATTCGTATAAATACCTGGGGATGATAATAGACTGTGAAGTGGTATGTAAAAAAGGGCATCAGCGCCTGTTATGTTTGAGGAAGCTGAGTAAATTCCATGTTGATAAATCCATCATGACCCTTTTTTATCACGCTTTTATTGAATCCGTTTTATCATTTGCGCTAGCAGCCTGGTTTGGGAACCTcactttgaaaaataaaaactcactCAACCAAATAGTAAAGTGGTCTAGCAGGCTGATTGGTGAGCCTAACGTGGAGACCCTGTACACAAAACAGGTACAGCGCATAACTAGTTCAATTTTAAACAACATTTCTCATTCACTGCACACAGAGTTCCAGCTTCTACCCTCTGGGCGTAGGTTTATGATCCCCAGGTGtaaaacaaaaagacacaaaaacagttaTGTTCCTGCAGCCATTACATTGAGGAATAAGTTATAGCTATATTTTGCACAAGTGTTtactcttgttttttttgtttttttttgttttttatgtatgtaCTCTTTTACTCTTCATGTAGACCTATGCATTATCTTATTCTGGACCGATAAGAACTTTTTTGATGTGTGATAATGTGAGGATGTGTGataatgtgatgatgtgtgactCTACTGCAAACAAAATCTACCTATGGGtataaataaagtaacttgaactttga
>XM_039802348.1
GCTTCACGTGACGCTTCaaaggaaattacatttttttttattaaaaacaattcagtacaTTACAATTTCTCGTAGAAATATTGAGTTTGCATTCCTCAACAACAATATAAACAGCTTTATTGACAATGCATAAAGATACATACATCAATAGatcaaaattaaattaaagaaaatctcatccctctaaaagcactcgtttcctctctccctgcATGAAAGGAAGCACGTTAGGGAAACGTATGCACGGAATGAAGAGACTTGGATGTACCTATGTGAATGACTAACAGAAGTTCTACTCTTTGAACCATCAGGTCTACCAGCGcagTCTCCACTTGAGACCTGTGAGCCCTGACCCGCTGTTAACTTGAGAGCTTACTGCAGCCAGAATCAgcgagatggaggaggaggccaGGTGCTTCTTGGGGAGGTTTGTGGAGGAGTTCCCGGCAGCTCTGGAGGAAGGCAGTCCACTGCCTGTCAGACCCATGAGCCGCAAAGTGTCCCTGGAGGAGCTACATGGAGAGAGTCTGGAGCTGGGCCTGAGGCTACTTGCTGCCAGGGGTGCTCCTGCAGGCCTCAGTGCGCTCCTGTGCCAGACCGCACTGTCCCAACTGCTGCAGAACGACCTTTTACCTTTCCACTGCCCCCACGAAGCTGATGACAACCAGGAAGAGGAACAGCAAGTAGTCTTGCTTCAGTCAGAGGCAGTCCAACGTCTCTTCCTTAACGAGCTGATAGATGGGGCACTAGCATGGCATCAAAACTTCCCCAAGGCCTCGCCCTCCCCCTCTCGGTTCCTCCTCTGCTCCATTCATGCCATCAAGAACACAAGAAGGAAGATGGAGGACAAACACTTGGCCCTGGCTGAGTTTAACCAGCTCTTTGGAATCCAGGATGGAGTCGAGCGTGCCTACTATGCTGTGTTTGATGGCCATGGAGGGGTGGATGCTGCCACCTTCGCTGCCACACACCTCCATGTTGCTCTGAGTAAACAGGAGACACTGCGGAGTGACACAGCCACAGCCTTTAAAACTGCTCTCAAACACACTGATGACATTTTCAAGAGCAAAGCCAAGAGAGAGcgtcTCCGGAGTGGCACAACAGCTGTGGCGGTGTTGATTCAAGGACAGGAGCTGACTGTGGCATGGCTGGGAGACTCTCAAGCAATGCTGGTCAGAAAGGGACAAGCTGTTACACTCATGGACCCCCATAAACCAGACAGAGAGGATGAGAAACAGAGAATTGAGGATCTTGGTGGCTGTATCACCTTCATGGGTTGTTGGCGTGTTAATGGCACCTATGCTGTCTCCAGAGCAATTGGTGACTTTGACCAGAAGCCCTATGTCTCTGGAGATGCAGACTGCTCAACAACCCAGCTGTGCGGAGACGAGGACTATTTGCTGCTAGCGTGTGATGGCTTTTTTGATGCAGTCAAACCTTCAGAGGTCCCTCATATGGTCTTGGATGCACTCCATCTGTCTTacGGGGgaggtgacaaaaTCGCTCAACAGTTGGTAGGTCACGCTGAGGCAGCCGGTTCAGGTGATAACATCACAGTGATGCTGGTGTTTCTGCGACCACCGCAGCAGCTGCTGGCTCAAAACTCCAGTACAGGACCTGCACGAGCTACTCAGGACTCCTCGCAAGATGCACCACAGCAGTAAAGAAGGAGGTTTGCTGCCCCAACACTACTGTGCCAAGCTACTGCctgacttttctttttcattcccAAGCTGTCAGATATCCTGCAGACTGTGTCAATTAGTTTGGGATTATTTGAATGTTAAAGGATACACACCATTGTAGATATGTGTTTAAGTTTTCTCCCACCTCGAAAATGCCtttttctgtgctgtgtttcaGTGGACTTTCAGTTTTCCCAGATGAAAATTAAATATTTCTAGTAGCTATTGTCAACTTTAGTTTACAAAATGCCTATAAGCCTTCAAGAACTGATATCAGTAATGCCAAGCAGAATGACTATTGAGAGCATTTTACACTGTGTACCGTGCATGAAATGATTTGGTAAGTCACTACATTTTGCAACCAATATGAAATGATACAGTTTGTTGAATCTCTAATTCCAATTTGTTGAATCTCTAATTCTGCACTTTATTCATGAACAAAGTTACATAGGGATCACCGAGAGGCATCAGTGTTTTTAAAGGAGCACTAATGTGACAAAACTAACTACATAAGCTTGGCATGTAAATGGTAAAAGTGTTAATGTGGAACATGTTGCTTgacagtatttttatttattttttaacagttcTTAATCACATCTTATATTATAGATATGTCTGTTGTAATGATTTTGTAATATTCTGTATCACTGATAAGGTAATAATTGGTATCAACGGCCGAATTAAAAGCAATGAGaatgaaaacagaaaagaatGTGTTATTTAAAACCAATGTCAATAGATTTTAAAAAACGTTTGTTTGTACAGGTTATGGGGTAAGTAGGTTACCAATATATAACACAACTAATATTGTTGTATTACAAGAACAAACATTGATATCATAAATTGTAAAGTTTGATGAAACAAAGGACCTGATTGGGTGCAAGGATGTTTTTGGGGAGGTACATTTTGGAgatatactcgttctaaacaCTTTTATCTGGGCCAGTAGGCTATTCTAA

Function

symbol description
ppm1f Enables phosphoprotein phosphatase activity. Acts upstream of or within protein dephosphorylation. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including eye; fin; heart; skeletal muscle; and testis. Orthologous to human PPM1F (protein phosphatase, Mg2+/Mn2+ dependent 1F).

NR:

description
protein phosphatase 1F

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0046872 metal ion binding molecular_function
GO:0004722 protein serine/threonine phosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802346.1 False 1744 mRNA 0.48 8 10904223 10968204
XM_039802347.1 True 3679 mRNA 0.42 9 10901946 10968203
XM_039802348.1 False 2647 mRNA 0.44 10 10807831 10968204

Neighbor

gene id symbol gene type direction distance location
tm2d2 tm2d2 coding downstream 103138 10637048 ~ 10704693 (-)
hdr NA coding downstream 697362 10089296 ~ 10110469 (-)
LOC120559983 LOC104937676 coding downstream 732628 10069711 ~ 10075203 (-)
loxl2b loxl2,LOC104937675 coding downstream 754534 9996041 ~ 10053297 (-)
sfrp1a sfrp1,LOC104937559 coding downstream 919298 9875316 ~ 9888533 (-)
top3b top3b coding upstream 17901 10986105 ~ 11091962 (-)
sdf2l1 sdf2l1,LOC106531766,LOC106570867 coding upstream 192245 11160449 ~ 11169327 (-)
LOC120561251 NA coding upstream 383650 11351854 ~ 11354906 (-)
npdc1b npdc1 coding upstream 640415 11608619 ~ 11639438 (-)
niban2b LOC106585213,LOC107560233,LOC107715759 coding upstream 673598 11641802 ~ 11715948 (-)
G60634 NA non-coding downstream 10676 10796492 ~ 10797155 (-)
G60602 NA non-coding downstream 37046 10770519 ~ 10770785 (-)
G60601 NA non-coding downstream 38214 10769418 ~ 10769617 (-)
G60600 NA non-coding downstream 39444 10767983 ~ 10768387 (-)
G60598 NA non-coding downstream 40906 10766191 ~ 10766925 (-)
G60654 NA non-coding upstream 10771 10978975 ~ 10979330 (-)
G60655 NA non-coding upstream 12213 10980417 ~ 10980756 (-)
G60680 NA non-coding upstream 139347 11107551 ~ 11112659 (-)
G60683 NA non-coding upstream 151646 11119850 ~ 11120802 (-)
LOC120560099 NA non-coding upstream 154349 11122553 ~ 11122908 (-)
unc5db unc5d other downstream 288864 10122152 ~ 10518967 (-)
tacr1a tacr1,LOC102799894,LOC100703444,LOC102196095 other downstream 2080388 8643403 ~ 8727443 (-)
G60145 NA other downstream 2405265 8401022 ~ 8402566 (-)
anapc7 anapc7 other downstream 2920406 7877399 ~ 7887425 (-)
specc1la specc1l other downstream 3041819 7727560 ~ 7766012 (-)
G60715 NA other upstream 220938 11189142 ~ 11189741 (-)
abca2 abca2 other upstream 317181 11285385 ~ 11593660 (-)
LOC120561001 whrn,LOC102797690 other upstream 933446 11901650 ~ 12061646 (-)
LOC120561038 LOC102778062,LOC101486272,LOC102199534,LOC108245630 other upstream 1325503 12293707 ~ 12555285 (-)
G61264 NA other upstream 2620835 13589039 ~ 13589332 (-)

Expression


Co-expression Network