ankrd13a (ankrd13a)


Basic Information

Item Value
gene id ankrd13a
gene name ankrd13a
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 18896623 ~ 18904773 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802369.1
GACATTCTTGTTATTACACATAAATTAAGTTCCGTTTAAAAAGTTACGGACATCGATCTTAATTAGATTGTATTAATTCAGTTGTGATTCTATTTATATATAGGACACCCCTGTCATCATTGGGTACTGCTTCTGGCACTTCCTTGTTCAAAAGTTTTATTTAGGGAAAGGCTTGGGTGAAAAGTTGGGCACTGGTTTACATATCTCGACGTTGTTATTGTCAAATATAAAAGGCATGGGTCATATTTTTCGTACATTTTGGCAGAACTAGCGTGCTGCTGTCGCAGTTATCCCCATGGCTGTTGTTAGAAGCTGGCTAACGTTGCACTGAGCGGCTCCACAAAGAGGAAGATGTCCacggctaacgttagcgaagATGTCCGAGTGAAGTTCCCCCTGCATTCCGCAGTGTGGGAGAACGACTACAGGACACTAGAAGAGCAAATACAGTCACCACAGAATGACATTGAGGCCGTGGATCCCAGAGGTAAGACACCTCTACACCTGGCTGTGTCGCTCGGGCACCTGGAGTCAGTGAGAGTCCTTCTGAGACACGGTGCTGAAGTGACTAAAGAAAACGGCATGAATTGGACAGtgCTTCAAGAGGCAGTCAGCACGGGAGATCCAGAGATGGTTCAGTTAGTGCTTCAGCGCAGAGACTACCTCAAAGCCTCCACTGCTCTCGGAGGAGTGCCTGAGCTGCTGGCAAAGATCCGAGAGTCTCCAGACTTCTATATGGAAATGAAGTGGGAATTCACCAGTtggaTCCCTCTTCTGTCCCGGGTTTGTCCAAGTGATGTTTGTCGCATTTGGAAAAGTGGCGCCAGTCTGCGAGTAGATGCCACTCTTCTAGGCTTTGAAAACATGACTTGGATCAGAGGGCGCAGAAGCTACATCTTCAGAGGGGATGATTCATATGCAGAGTTGATGGAGGTGAACCATGAAGATGAAGTTGTGGACACGGAGCGCTTCAACATATCCCAAGAAATCGAGGATGTCACGCTAGAGTCAATGCAGCCAGCTGAACAGGAAGTTGCCAAAAGATTGACCACTCCTATTGTCAACACCTACTTGGACACCAAGGATATTGCTTTCGAGAGGATCAAGTCTGGGATTTGGGGCTGGAGAGCTGACAAAACTGAAATGGTCAATGGATTTGAAGCAAAGGTTTTCAGTGTGAACAATGTGAGTGTGGTAATCAGGACAAGGACCGAACATCTCACAGACGAAGAGAAAACCAGGATAAAAAgtgAAAGGAACATCCTGGAGTCTCTGCTTGGGACTGTGGAGCAGCACATTAGTGCACAAGGGGACCTGACTCTTGAGTATGCAACAGCCACCAATCCCACTGCCATCACTCCAGAGGAATACTTTGACCCTGACTTTGACCTGGGGAACAGAGACATCGGCCGACCCATTGAACTGAGCATTCGAACACAGAAGTTCAAAGGTACATTGTGGATGAGTGAGGAGCATCCTCTGTCCCTGGTGGAGCAGGTGACCCCCATTATCGACCTCATGGCTCGGACCAGTTCCCATTTTGCACGGCTACGAGACTTCGTAACTCTAAAGTTTCCTCCTGGATTTCCTGTTAAAATAGAGATTCCCCTGTTTCATGTGCTGAATGCCAGGATTACATTTGGTAATGTCAATAAATGCAGTACTGAAGAGGAGGCACACATAACTCCAGCAGCTACACCAACATCCtcaggagaagaggaagaagctgCAGCTCTGCCTCCGTTTCAGGTGTGTCCTTCAGTGTTTGAGGTGCCCGCCAGTTACCATCGGCGGGGAGGCAGCCGACACACACCCATATCCAACAACGACGAGGAGCTTTTGCAGTACGCCATCCATCAGAGTCTCCTGGAGTCTCGCAGAGTCCCAGGCCAGGAGGGGATTTGGGATGATGCTGATGGGGAattcactgatgtaatgcccaGTAGCCCGAGTGACAGGAGTATCCCAGAGGGGGTGCTAGTGGAATATGGAGACACCCCCAGCTCGGTCAGCTCCCCCTCTGCCTCAAGCCCCGACTCAGAGCTCTGCCTGGCCATGGAGCTCTCTGCACGGGCTCAAGAGGAAGAGGATAGGCTGAGgaagcaggaggaagaggatctgGAGAGGATCTTGCAGCTATCACTCActgagaagtaaaaaaaaaaaaataagagggAATAATAATGCAACTTTTCCAGATCCAGAAGCAACTACCACACCTCAATTGTCCTTCCTTACCACTGTAGTCATCTATGCAACTGCAAGTTTCTTTCTTTAGCAGATCATTCTTGCACAGGCAATATCAGATTCTCGCTATCCAATATTTTCCAAAAGGTATTTTTGGTAAGACCATACTCCTTTATATATTTCTATCTTAGCATAGTGTGTCTCCATCCTCAACTCATGGACAGATCAGATAATTTTGGCTCAgttcttctttttatttattttctatccaAATGAGAGTCACAGCAGCAACCCGTGCGTGTTAATCACATTGTTGCCCAGAGTGGGGTCACAACGGTGTAGTTGGGGTTCTAGGAACAAAATGACTATTGAAAGGGGACACTCAAATGTGGCACTTAAGGTCCAGAGCACTGTTGTTTCCCCAGGTACATGTTTTCTCAGTTCCTGAATTTTAGATGGCTAGATTAAAAACAGCTTAGCCTAATAGAAGGCTACCAGTACTGTGGACCTAAAGGGACAGATGTATAGTTTTCACTGTGAGGTCTTCCTGCAGAGTCACTTTGTTGAGGACCCTGGTCTCACGGAGTAACGGAAATCTCAGGGTTCCAATTTTACAAATTGTCCTATCACTTTGGAATTAGTTTGTAAATCTATGGGAAATTGTAGCCTGGTAAATGTTTCTTTGGTGCAAAATGGTATCACTCGTGCATATCTGCCATATCAATATTAATTCAGAAAGTTGGGTTCATTGAGTCAAAGGTTCACAAGTAAATGAATGTTCTCGTACGTTGTGAACATACACTTTACTGATGGCTAAACAGAAGCATGTTAATGTGAGATCAGCTGCATGGTAACGCAATATCTTTGCTGCAACAAGGACAGGGCTCTAACTTTCCCGGATTGATTTTTATTGAACATTTTCTCAGATTTCATGGTGAGAAAGGACATATTGTTAACGGTCACTGAGCGACTTCAAGCATTATCACCTCAGTTCAAAAACGCAAATGCAGGGACCAGTATGTCTGGATTTACAGCCGTCATGCAGTTATAAAGCAGTCACATAACCAATGCTGCAGAGATTATTCAGATTCCTAAAGGCAGTCTGTTAGCCTTTTGTAGCCACAAACAACTCTAGACCTCTGAGCAGAAGAAAGACAGCACAGACTTTTAAGATTAAGCACGCCTGccatactgtatgtaggattAGTTTCATCAGCATGTGCCAAGGGATTCCTTTGCTCTGACAACGCTTGGAGGGGGCAAGAGGTAGTGAAGATTTGATGTGCCACTTAGACTAAAGTTTTGAAcagatctttttattttattttttattttgtaacttAAAAACCAGATGAACCGATTTCAGTTGTACCAGGGCGATGCTGAGTAACATGCATTAACCACTATAGTTGATTTCACTGACAACCAACCACTTATCCAAGGTCTCTCTGCGTAGCTGCGTCTGACTTTCAGGGGCTGCAGCTTTAACACTTCTTATTTCATAAAGCTCCAACTTTCCAAAACTGCTAAACTGTCAATTTAAAAAGGCAAGCTTTGGTTAATTTAATGCAGGTCTTTGTAATGCACCGTTCCAGCTgcaaggttttttttatttgttaaaattttaagaaaatgtgtctgtttcaaaatgtttgtaaaataaaagcactttatTTCCTTGA

Function

symbol description
ankrd13a Predicted to be located in membrane. Predicted to be active in cytoplasm. Orthologous to human ANKRD13A (ankyrin repeat domain 13A).

NR:

description
ankyrin repeat domain-containing protein 13A-like isoform X3

GO: NA

KEGG:

id description
K21437 ANKRD13; ankyrin repeat domain-containing protein 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802369.1 True 3869 mRNA 0.45 15 18896623 18904773

Neighbor

gene id symbol gene type direction distance location
LOC120560157 tchp,LOC102799482 coding upstream 18533 18872282 ~ 18878090 (+)
fam222a fam222a coding upstream 55421 18794250 ~ 18841202 (+)
aldh3b2 LOC103470338,LOC103357480,LOC106944551,LOC103142889,LOC106918406,LOC107097252,LOC101157544,LOC100709454,LOC102306236,LOC104945033,LOC105926931,LOC108234466 coding upstream 160148 18730216 ~ 18736475 (+)
ube3b ube3b coding upstream 166683 18720734 ~ 18729940 (+)
myo1ha myo1h,LOC104945027,LOC102796924 coding upstream 181313 18704132 ~ 18715310 (+)
sgsm1a sgsm1 coding downstream 19542 18924315 ~ 18952142 (+)
gatc gatc coding downstream 49051 18953824 ~ 18961484 (+)
LOC120560962 NA coding downstream 53233 18958006 ~ 18958978 (+)
LOC120560963 NA coding downstream 57064 18961837 ~ 18962808 (+)
alkbh2 alkbh2 coding downstream 65511 18970284 ~ 18973314 (+)
G62755 NA non-coding upstream 31816 18864575 ~ 18864807 (+)
G62741 NA non-coding upstream 123515 18772755 ~ 18773108 (+)
G62732 NA non-coding upstream 148127 18747490 ~ 18748496 (+)
G62667 NA non-coding upstream 259402 18636726 ~ 18637221 (+)
G62656 lztr1 non-coding upstream 279054 18617074 ~ 18617569 (+)
G62796 NA non-coding downstream 61310 18966083 ~ 18982623 (+)
G62836 NA non-coding downstream 180161 19084934 ~ 19086862 (+)
LOC120560789 NA non-coding downstream 246760 19151533 ~ 19153584 (+)
G63005 LOC104920315,LOC103374896,LOC100704901 non-coding downstream 644637 19549410 ~ 19554906 (+)
G63007 NA non-coding downstream 650610 19555383 ~ 19562350 (+)
mvk mvk,LOC102798305 other upstream 154224 18737518 ~ 18742399 (+)
acacb acacb other upstream 211160 18661157 ~ 18685463 (+)
tpcn1 tpcn1 other upstream 421892 18441347 ~ 18474731 (+)
tbx5b tbx5,LOC103470367 other upstream 477033 18407348 ~ 18419590 (+)
G62513 NA other upstream 565393 18330705 ~ 18331230 (+)
tmem119a LOC103353570,LOC104946818 other downstream 171788 19076561 ~ 19081654 (+)
rasl10a rasl10a other downstream 525628 19430401 ~ 19448950 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 854823 19759596 ~ 19763524 (+)
vps13a vps13a other downstream 1496174 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 1568878 20473651 ~ 20490586 (+)

Expression


Co-expression Network