ubl4a (ubl4a,LOC101469798,LOC102296658)


Basic Information

Item Value
gene id ubl4a
gene name ubl4a,LOC101469798,LOC102296658
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 37700498 ~ 37708136 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802389.1
ccaatcacatgACCAAGACAGTGGAGAGACCATCCGGGAAGATGTAATGAGAAATGGTCTGGATCCCAATTGGGTCAGACGGTCTTTGGGGTGTTTCCGAGCCCATGGGGGATAGCCATACAACCCTCCGGCCAGTAGGTGGCAGTAGTGACGTacgagagcagcagcagccccgcGCATCTGCGGTAGAAGAAGATGGGCCGTTGACAAGGGAAGAACTCCTGAGGCTATCTTGAGCTAGCAAAAATAACGTTACTTGAGTGTATTTAGTTGCTTAGCATTTGaacgtgttgtttttttattcgcATCGAAAATGATCCTTACCGTGAAACCGCTTCAAGGAAAAGAATGCAGTGTACAGGTGACTGAAGATGAAAAGGTCTCCTCAGTGAAGGAACTTGTGTCAGAACGTCTCAACATACCAGCGAACCAGCAGCGGTTGCTCTATAAAGGGAAAGCGCTTGCAGATGAGCACAGACTGAGTGATTACTCCATTGGGCCAGAGGCTAAATTGAATCTGGTTATCCGTCCAGTGGGGGAGAGGACTGGAGCGTCAGGGATggctgccagcagcagcagcagcagcagcagcgggagCAGCACCACGCACGGAAGAGTGTGGCAGACGGTGTCCACTATTCTTGCTCGACACTTTAGTCCATCAGATGCTGCAAAAGTCCATGAACAGCTTATTAAGgACTATGAACGCTCCCTTAGACAACTTAGTCTTGATGACATTGAGCGCTTGGCGGGACGACTGCTTCACCCCGACGCCGAGGGCATGGACACCTCCTACATGGACTAAGAATGCCTAGCTGGAAGtttcttttttgtgattgtCTTTTGAGAGATGCTCAGTGCTCGGAGGTGCATACAGCGTTTAGAGTGTGAGGCATGGAAAATATTTCATCAGTTTTCTTGCAGAGCGCCCCAGCTGTGTGTGCCTAATCGGTGGCTGAGTGAACACAGATAAAACTGACTGTTGGTTATCTCAGCAATAGGGCTTTCTTATCCACGACCACAGGACTTGGATAAGAAAACTTGGCATTTGGTTCCAGTCATTGATGTTGCAGTAACAGTAATGACACAAGGCCTGATCACATAATATTTGAATACAAAGTAATCCATTTATGCTGTTGGTTTCGCATGATCTCTGGCTGCTACAACTCCCAGGGGGCACTAACTTCTACTGAAGGGTATTTTTTAGCAATGTCTGTGTTGGATGAtgactgtgtgtttttctgttaatCATTCGTGAGACGGTAATACATGTTTTATTCCATAACTAACTGATGTTCATTGTATGATTTGTAAATATCATGTTTATATATACAGACATTAAaccacagaaaaaaagacaaaaaaaagacaaatgt

Function

symbol description
ubl4a Enables chaperone binding activity. Involved in tail-anchored membrane protein insertion into ER membrane. Located in cytosol; membrane; and nucleoplasm. Part of BAT3 complex.

NR:

description
ubiquitin-like protein 4A-B

GO:

id name namespace
GO:0071816 tail-anchored membrane protein insertion into ER membrane biological_process
GO:0006810 transport biological_process
GO:0071818 BAT3 complex cellular_component

KEGG:

id description
K23388 UBL4; ubiquitin-like protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802389.1 True 1376 mRNA 0.46 5 37700498 37708136

Neighbor

gene id symbol gene type direction distance location
si:dkey-32e23.4 LOC103362318 coding downstream 210 37685932 ~ 37700288 (-)
disp3 disp3,LOC102795715 coding downstream 16319 37655023 ~ 37684179 (-)
LOC120561226 NA coding downstream 145303 37552066 ~ 37555195 (-)
LOC120561222 NA coding downstream 158896 37539184 ~ 37541602 (-)
LOC120561221 LOC103362313,LOC100704182 coding downstream 164521 37478088 ~ 37535977 (-)
bin3 bin3 coding upstream 54410 37762546 ~ 37807680 (-)
egr3 egr3 coding upstream 104786 37812922 ~ 37817376 (-)
LOC120559987 NA coding upstream 118754 37826890 ~ 37911235 (-)
LOC120561264 rhobtb2 coding upstream 212056 37920192 ~ 37934852 (-)
slc25a37 slc25a37,LOC103371456,LOC107093885,LOC102799379 coding upstream 409002 38117138 ~ 38159292 (-)
G67550 nfu1,LOC101170349,LOC101072203,LOC100703913,LOC103362311,LOC107393744 non-coding downstream 255960 37439315 ~ 37444538 (-)
G67521 NA non-coding downstream 369378 37330638 ~ 37331120 (-)
G67486 NA non-coding downstream 593039 37102992 ~ 37107459 (-)
G67475 NA non-coding downstream 601967 37058238 ~ 37098531 (-)
G67409 NA non-coding downstream 922363 36777625 ~ 36778135 (-)
G67681 NA non-coding upstream 231745 37939881 ~ 37940295 (-)
G67687 NA non-coding upstream 281096 37989232 ~ 37989542 (-)
G67861 NA non-coding upstream 407110 38115246 ~ 38116233 (-)
G67882 NA non-coding upstream 437860 38145996 ~ 38146799 (-)
G67883 NA non-coding upstream 467589 38175725 ~ 38175961 (-)
G67577 NA other downstream 145731 37535859 ~ 37554767 (-)
G67523 NA other downstream 355415 37344461 ~ 37345083 (-)
adrb3a adgra2,LOC104963277 other downstream 374097 37229742 ~ 37326401 (-)
G67483 pdlim2,LOC104963286,LOC103470528,LOC100702294 other downstream 548852 37098792 ~ 37151646 (-)
arrdc3a arrdc3 other downstream 672705 36971161 ~ 37027793 (-)
LOC120560036 NA other upstream 627952 38336088 ~ 38344796 (-)
LOC120560826 pitpnb,LOC104952320 other upstream 1702103 39410239 ~ 39461568 (-)
G68717 NA other upstream 2227236 39935372 ~ 39935846 (-)
LOC120560061 NA other upstream 2291870 40000006 ~ 40026743 (-)
ppp2r2aa LOC104921711,LOC103356615,LOC108236503,LOC104961741,LOC106520125 other upstream 2605233 40313369 ~ 40330695 (-)

Expression


Co-expression Network