LOC120560167


Basic Information

Item Value
gene id LOC120560167
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 4461429 ~ 4471480 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802390.1
TATgttgagaaagaggaagtgagacGGAGGCACTGAACGCCCCACACGGTGCTGAACGCCCCACAGCAGCATGAGAAGGGGAAGTGTGAACAACAGCAAAGTTCACATTTAACACTGAAAAACAAAGACGAGCAGGTTATTCTCCCAGAGCAGGTCAGATCCGAAGTGTCCCAGGATGGCTCAAGGCTGCCTCAAGTGTTTGAAGTACACCATGTGTTTCGCCAACTTCCTCATTTTTATGTCTGGCGTGGCGGTGCTGGGCATCGGTGTGTACATGACGGTGAATTTCAAGATGACCGCACTCACCCCGACCTTGGCCAGCTTCAACTTAGCCAACATGCTGCTGGTAAGCGGCATCATCGTCACCTGCGTGTCCTTCCTGGGCTTCTTGGGTGCTCTGAAGGAGAACCGCTGTATCCTTCTGACGTTCTTCCTGCTGCTGTTCATCCTGATGCTGGTGGAGCTGACTGCAGCATGCCTGCTACTCATGTATGAGGGAGAGATTGGTGAAAGGGTGAAAGATGATCTCACCAAGGGTTTGGAAAAGGCAAAAGGGTCAAACTCAACGAGTGATTGGGATATTATTCAGAAGACGATGGAGTGCTGTGGAGTCAATAATGTGACAGACTGGGGATCCGTCGTGCCTGCCTCTTGTACACCTGATTACAGCTCACAGGGTTGTTTGGCAAAGTTGAAGAACTGGTTTGAGGAGAACTTCCTAACCATTGGGATATCTGTCATTGTCCTCTGCATCATCGAGGTCTTGGGAATGTGTTTCGCCATGACGCTCTTCTGCCACATCAGCAGATCTGGCCTGGGCTACAAGTTGTAGACAGTACTATATGTCAAACAATGTCTTTTTATCTACGTATTTCACAGTTGATTTGCTGTACAGTTTTCAGTTTTTAGAAGGCAAGAATGGAATGAAAAGGATGTTTCTGGAAAAACATTTAAGATCAAAAGATTGGTTGAAGTCTAaatcgcacacacacaaaaatgtttcAGACATGGCCTTCTATAATTGTGAGCGAAAACAAACTATGTCGAATGCTATTTCAGTCCGAGCTGTGTGGCATAAAAGCCGCTTGTTTCCGGGTTCCACTCAACTTTTCTACATTGTACATCTTTTGAAGGGAATAAATATGAAAATCTATTTTCATGTACAATATTacatatctacagtatattttttttccccacaaactTAACTTTTGGGAAGTCCTGATACACCAATAAGTATTGTTTACAGTATTAAGAACTGTATCCTCCATTTTGACTAAGCTCATGTTAAGATGATCAGCATTTCCTGTTGCTAGCTTGCAGTGCTCTGATCTGTGGTGAAGCCAAACCTGTAACCACTTCCTCTTTTGACCCTGTTCAACCATCAGTTGGTTCCTCTAGAAACTGACAGCTGACACTTGTTTCTCTaaattttataaattaaaaggCAGGGAAAAAACCCTTCTATATAAATGTTGAAGACTTCCAATTTTAAAGGAACAAttatttcccaaaaagcccaagatgacgtcctcaaatgtcttgtttgatATTCAGtctactgtcccagaggagagaagaaactagaatatattcacatttaacaagctggaatcctAAGATGATTTTTCTGCACCTGTATCCAACAAATCTAAATTTGAAACCCCAAACatataaatgtattcatgttgtATATACTACAGGCAAAAAGGACTATAGCTCTCATCTGGAAGAACATGGAGGCACCTACAATCTGTGCTTGGACCGAAAATATGCCACAATGTATGTTCATGGAGACATTGACGTAtatactaaaaaaataaattggatGTGTATGAAAA

Function

GO: NA

KEGG:

id description
K06489 CD53, MOX44, TSPAN25; CD53 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802390.1 True 1841 mRNA 0.42 8 4461429 4471480

Neighbor

gene id symbol gene type direction distance location
isl1a isl1,LOC103469637,LOC107374027,LOC107661270,LOC103141950,LOC102231175 coding downstream 352206 4103017 ~ 4109223 (-)
ak6 ak6 coding downstream 612919 3844642 ~ 3848510 (-)
ydjc ydjc coding downstream 617389 3830346 ~ 3844040 (-)
pias2 pias2 coding downstream 644609 3799032 ~ 3816820 (-)
ptar1 ptar1 coding downstream 839949 3606395 ~ 3621480 (-)
pnpla7b pnpla7 coding upstream 5795 4477275 ~ 4529746 (-)
dph7 dph7 coding upstream 60488 4531968 ~ 4543886 (-)
LOC120559971 NA coding upstream 167624 4639104 ~ 4642738 (-)
si:ch211-158d24.2 megf9,LOC102787576 coding upstream 173124 4644604 ~ 4695210 (-)
galnt9 galnt9 coding upstream 288636 4760116 ~ 4866975 (-)
G59207 NA non-coding downstream 358 4454690 ~ 4461071 (-)
G59197 NA non-coding downstream 47448 4413759 ~ 4413981 (-)
G59101 NA non-coding downstream 273957 4187261 ~ 4187472 (-)
G59098 NA non-coding downstream 277512 4183353 ~ 4183917 (-)
LOC120560054 NA non-coding downstream 358515 4099798 ~ 4102914 (-)
LOC120560046 LOC103358197 non-coding upstream 77245 4548725 ~ 4557613 (-)
G59241 NA non-coding upstream 153558 4625038 ~ 4625307 (-)
G59268 NA non-coding upstream 164428 4635908 ~ 4704273 (-)
G59287 NA non-coding upstream 261150 4732630 ~ 4842143 (-)
G59290 NA non-coding upstream 266569 4738049 ~ 4741131 (-)
LOC120560375 NA other downstream 25113 4432844 ~ 4436316 (-)
sub1b sub1 other downstream 31339 4424149 ~ 4430090 (-)
golph3a golph3,LOC103397487,LOC108249570 other downstream 236861 4209748 ~ 4224568 (-)
G58994 NA other downstream 772091 3688629 ~ 3689338 (-)
G58920 LOC106099046,LOC107687292,LOC107712180,LOC107663003 other downstream 1044575 3415627 ~ 3416854 (-)
LOC120561493 NA other upstream 994743 5466223 ~ 5466437 (-)
LOC120561494 NA other upstream 1118093 5589573 ~ 5591810 (-)
G59521 NA other upstream 1954726 6426206 ~ 6426811 (-)
G59563 NA other upstream 2051279 6522759 ~ 6523674 (-)
G59739 LOC102786375,LOC102210956 other upstream 2519723 6991203 ~ 6996856 (-)

Expression


Co-expression Network