pebp1 (pebp1)


Basic Information

Item Value
gene id pebp1
gene name pebp1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 30555013 ~ 30557814 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802559.1
CCTCAATGTGGGCGGAGAATTAATTAACAGCTAGTGGTTAGCTAGCTGTTacctaaactaacgttagcttgcctgtggaggccttttatatatgtcaatggtggaGGCTAACCGCTACAATGTTTGAGAGTGGGCGGGGTTAAACGTTTAACTCCGCCCACATTGAGGTCTGCGGGTCTGACTCTGCAGTCAGGGGCTTCTCACAGCTAACAACGTCTGCAACCGGGTTACGAGTCTAAAAATGCCCGTAGATTTGAGCCAGTGGACCGGGCCTCTTGCCCTGCCGGAGGTCGAGGAGAAGCCTGCGCAGCCTCTGACCGTTAAATACGACTCTGTGGAAATCGACGAGCTTGGCAAAGTGCTCACGCCAACACAGGTGCAGAATCGACCCACCTGCGTGGAGTGGGAAGGATGTGACTCCAGTAAGTTGTACACTTTGGCCCTGACCGACCCTGACGCTCCCAGCAGGAAAAACCCGAAATTCAGGGAGTGGCACCACTTTCTGGTTGTCAATATGAAAGGTAATGATGTGTCGTCTGGCTGCGTCTTATCGGACTACGTGGGCTCTGGTCCTCCCAAGGGCACAGGTCTCCACAGGTATGTGTGGTTGGTGTATGAGCAGCCAGGCAGCCTGTCCTGCACTGAGACCGTCCTAACTAACCGCTCTGGAGACGGCCGCGGCACATTCAAGATCCAGAGTTTCAGGCAGAAATACAACCTGGGAGCCCCGGTGGCGGGAACCTGCTACCAGGCCGAGTGGGACGACTACGTCCCCAAACTCTACGAGCAGCTGGCCGGAAAATAAATGGAAAGACTTGACTCGAGCGTTCAGCACTAGGAATTCCCACAGAGGCTGGTGGTCTATAGGAAATTCCCATTCGTGAAAGAAGCAAAAACCCCAACAGAAACaaagcatttttctttttgtacgTGTGCCACTGaatagtttagtttattgaaactgaatattttttttttccccctgttgccTACCTGTGACAAAAATAACTGCTCCTCTCAATGACGTCACCTGCACTCATCTGCAATAAATCTAGTAAACACTGAAATAGTTGCATTTTCTATTGAAATGTTTTCTGATCCTGCAGTGGCTGTTTAATGTTTGGAGACCCATTTGGCCAACTTGGATCCTCCATAACATCTTAGTATTAAGCATTAGTATTAAGTATCATAATAAATAATCCTAAATGTGAGGAATGATCTGAGAAATTTTTTCCATGGATATCTAAATAAATAGAACCATTGAA

Function

symbol description
pebp1 Predicted to be involved in negative regulation of MAPK cascade. Is expressed in retina. Human ortholog(s) of this gene implicated in prostate cancer. Orthologous to human PEBP1 (phosphatidylethanolamine binding protein 1).

NR:

description
phosphatidylethanolamine-binding protein 1

GO: NA

KEGG:

id description
K06910 PEBP, TFS1; phosphatidylethanolamine-binding protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802559.1 True 1265 mRNA 0.48 4 30555013 30557814

Neighbor

gene id symbol gene type direction distance location
rfc5 rfc5 coding upstream 24630 30524069 ~ 30530383 (+)
spring1 clg12h12orf49,c21h12orf49,LOC101487986,LOC104923683,LOC102233336 coding upstream 287940 30263603 ~ 30267073 (+)
tesca tesc coding upstream 332488 30197629 ~ 30222525 (+)
zgc:112294 LOC104923678,LOC103369777,LOC100697282 coding upstream 480416 30071764 ~ 30074597 (+)
selenoe LOC104961905,LOC101066385,LOC105931211,LOC108246935,LOC103369776 coding upstream 483458 30069411 ~ 30071555 (+)
suds3 suds3 coding downstream 90559 30648373 ~ 30657730 (+)
srrm4 srrm4 coding downstream 211611 30769425 ~ 30835681 (+)
hspb8 hspb8 coding downstream 280412 30838226 ~ 30849481 (+)
znrf3 znrf3 coding downstream 370932 30928746 ~ 31007297 (+)
si:dkey-174n20.1 LOC104959464,LOC104920648,LOC101478912,LOC102310039,LOC100693286 coding downstream 560011 31117825 ~ 31121911 (+)
G65890 vsig10 non-coding upstream 14174 30539817 ~ 30540839 (+)
G65883 ksr2 non-coding upstream 123272 30431386 ~ 30431741 (+)
G65881 NA non-coding upstream 133567 30417513 ~ 30421446 (+)
LOC120559990 NA non-coding upstream 167194 30387164 ~ 30387819 (+)
G65792 NA non-coding upstream 331937 30206616 ~ 30223076 (+)
G65951 NA non-coding downstream 196545 30754359 ~ 30837774 (+)
G65958 xbp1 non-coding downstream 348542 30906356 ~ 30909470 (+)
G66015 NA non-coding downstream 572227 31130041 ~ 31154168 (+)
G66072 NA non-coding downstream 743696 31301510 ~ 31301746 (+)
G66071 NA non-coding downstream 753129 31310943 ~ 31311447 (+)
LOC120560820 NA other upstream 303494 30246887 ~ 30251519 (+)
fbxo21 fbxo21 other upstream 342905 30186848 ~ 30212108 (+)
ubac1 ubac1 other upstream 1203257 29344580 ~ 29351756 (+)
mboat4 NA other upstream 1705542 28845626 ~ 28849471 (+)
G65084 lipg other upstream 3184054 27205234 ~ 27370959 (+)
G65899 taok3 other downstream 16272 30574086 ~ 30578159 (+)
LOC120561064 NA other downstream 299766 30857580 ~ 30893280 (+)
dmrt3a dmrt3 other downstream 1249981 31807795 ~ 31811553 (+)
adamts3 adamts3,LOC100699019,LOC101479253,LOC102313231 other downstream 1474762 32032576 ~ 32209534 (+)
G66231 NA other downstream 1568479 32126293 ~ 32136966 (+)

Expression


Co-expression Network