ndufaf2 (ndufaf2)



Basic Information


Item Value
gene id ndufaf2
gene name ndufaf2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 23257261 ~ 23273702 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039802625.1
ATGAACAGAATTGCTGGAGTTCTGCGGCGTACGTTCGGAATAGCACGCGACCACGTCGGGACAGATACTTTGGGGAATAAATATTACTTAATCCCAGAACAGAAGACATGGACAGGAAGGCTCGTCCGTGCCAAGCGGATGGTAGTGGCAGCCAATCCTAACGAATATGAATATATAGAAGGCAGCATACCGATGGAGTGGGACGcttgGATCCGAGGCAGACGGAAGGAGCCCCCCTCCGTCGAGGAGCTGCTGAAGAATGATTCTTACAGGGAGCACATTAAACTGAAGGCCAAGGAAGTGGAGGAGAAAGAACTGGCCCTACAGGCCAAGGAgtatgaggagggtctggtggCGACTCCTGCAAAGACTGTGGCCAAGGGCCACGCAGCCACGACCAGCTTCGGCAAGCAGGAGATCAGCGAAGACCCCACCAGCACTGCAAACACGTTCCAGCCTGGCTCCTGGATGCCCAATCCCAAGAAATAGACTCAGACATCCACATATATGGAGACCGCTGTACAAAGTAATACAATCCAATAGAAAAGCCCTGCAATGAATACTACCTTTGTGAAACTGATATTCACCTTACGTTAAGACTTTGAAATTTAATTTTAGAAGCAACTTTCAGTATAATGCAATCCAAGTCAACAACACCACAAACTATGACTCCAGAAAATTACCAGTTTAATCATCTCCTCTCCATTTCACAGAGGAAGTATTTCTTTCAAGGCTGTTTTATTGGACTGTATTACATTGTATGAGTTCCTATTTTTCTAGTCCCTTTGTGTAGTCGATATTGTATATAAACAAGACAATAAGCATCGATCATCTTGAAGCTGACATATAAGTGACCGCAATGATTTAATGTAGCTGAAAGGTCTGTGAATAAAGCAAAGCAAAACTAAAATGGGTGTACTTCCAGTTAACAACTGCAAATACACTGTCATGTTGAAGatattgtaaaaaatgtaatctaatacattgtaaatattttaattaCACAGATATTGACTCCTTGCCATTATAATGAATCATATTAAATGTATAAAATCCAAGCTGATCAGAA

Function


symbol description
ndufaf2 Predicted to enable NADH dehydrogenase (ubiquinone) activity. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 10. Orthologous to human NDUFAF2 (NADH:ubiquinone oxidoreductase complex assembly factor 2).

NR:

description
mimitin, mitochondrial

GO: NA

KEGG:

id description
K18160 NDUFAF2; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039802625.1 True 1069 mRNA 0.42 4 23257261 23273702

Neighbor


gene id symbol gene type direction distance location
elac1 elac1 coding upstream 366242 22884588 ~ 22891019 (+)
me2 me2 coding upstream 373387 22862584 ~ 22883874 (+)
mapk4 mapk4 coding upstream 395388 22840502 ~ 22861873 (+)
tspan36 LOC104956296 coding upstream 422191 22826626 ~ 22835070 (+)
smarcad1a smarcad1 coding upstream 445869 22791538 ~ 22811392 (+)
LOC120560302 zswim6 coding downstream 9377 23283079 ~ 23330548 (+)
LOC120561043 NA coding downstream 79248 23352950 ~ 23354264 (+)
dock8 dock8 coding downstream 134514 23408216 ~ 23487506 (+)
ercc6l2 ercc6l2,LOC105014104 coding downstream 430700 23704402 ~ 23722529 (+)
ipo11 ipo11,LOC102795548 coding downstream 480623 23754325 ~ 23906456 (+)
LOC120560300 NA non-coding upstream 11893 23219850 ~ 23245368 (+)
G63914 NA non-coding upstream 269221 22987181 ~ 22988040 (+)
G63872 NA non-coding upstream 351295 22904035 ~ 22905966 (+)
G63792 NA non-coding upstream 1107137 22131884 ~ 22150124 (+)
G63715 NA non-coding upstream 1381574 21875445 ~ 21875687 (+)
G63976 smim15,LOC106580593,LOC103398561 non-coding downstream 1218 23274920 ~ 23281109 (+)
G64026 NA non-coding downstream 156988 23430690 ~ 23432473 (+)
LOC120560908 NA non-coding downstream 157779 23431481 ~ 23443313 (+)
G64127 NA non-coding downstream 461122 23734824 ~ 23735293 (+)
G64130 NA non-coding downstream 471237 23744939 ~ 23749835 (+)
G63905 NA other upstream 327056 22929899 ~ 22930205 (+)
LOC120560787 NA other upstream 1657972 21588876 ~ 21599289 (+)
G63480 rbm19 other upstream 2579345 20676417 ~ 20677916 (+)
wdr31 wdr31,LOC102796061 other upstream 2766675 20473651 ~ 20490586 (+)
vps13a vps13a other upstream 2815168 20400947 ~ 20442093 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other downstream 214265 23487967 ~ 23562285 (+)
G64108 NA other downstream 418960 23692662 ~ 23693291 (+)
prxl2c aaed1 other downstream 1547612 24821314 ~ 24823066 (+)
cdc14b cdc14b,LOC102776968,LOC103141798,LOC106948523 other downstream 1550016 24823718 ~ 24837448 (+)
LOC120561182 LOC104948667,LOC104930137,LOC103397628,LOC103366370,LOC107092578,LOC102226292,LOC106956829,LOC106919698,LOC103470079,LOC103141747 other downstream 2411262 25684964 ~ 25696576 (+)

Expression



Co-expression Network