arid5a


Basic Information

Item Value
gene id arid5a
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 38600352 ~ 38620463 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802699.1
tcaAGTTGAAGAGGGCGCCGCATGAACTGCTGTCACCAAACACTGTCACGCCGGAGACTAGAAGACACACCGCTTCTGGAGATGGCTCAAGAGGACCAGAGTGAGACGTCCCAACAAACTGCGACCAGTGACGAGGACAAGGGGACAGGAACGCAGGCTTCTCCCTCCGTCATCGAGATTCACGACTCCATGACCGAATGCGAGGAAGACGCGGCGCCCAGCCCGGTGCAGATGGAGGAGAAGGCTTTTATATCGAGGCTGCACGCGTTCATGAAGGACAGAGGAACGCCCATAGAAAGGATCCCACATCTGGGCTTCAAACAGATTAATCTTTGGAGGATCTACAAAGCTGTTGATAAACTAGGGGGCTATGATTCGGTGACCGCACGGCGTCTTTGGAAGAAAGTGTACGACGAGCTGGGAGGAAGTccaggcagcaccagcgctgCTACGTGCACTCGCAGACACTACGAGAAGCTGGTGCTGCCCTTTGAACGACACCTAAAGGGGGAGGACGACAGGCCGCTGCCCCCGAGCAAACCGCGAAAGCCATATAAGAGGAATTTGGATGCCAAGGTCGCCAAGgctgagaggaagaggaagaggactcCGTCGGACATGGAGATGGATTCAGAGATGGAGATTCTCAGCCAGAGAAGTCCGGAGGCTGCCTGCCAGAGTGAAGCGCCGATGCATCCTCACTCCGCTCTCTGGGCCGGCCCCTCTGACAGACTCCCCCCCGACTGCTCTCAGCCAAACCGAGTCGccaccgccgccgccgccgccgccgccgccgccctTTGCACGTCCGTCTACGCCCACCTCGTCCCGGTCCCCGCGTCCAGTCCTTGGACCGCTCATGTCCCGCCCGCTGTTCCCGGAGAGGTCATCTCTCCCCTGGAGAAGAAGAAGCGAGTGGCTCAGGCGAGCCTGAACTTGCCGCCGAGTCCTCACGGCGAGGACCGAGAGCGGCCGTCCGTCATCCACTGCTCCCAGTCTCCGGCGCGGGCTTCTTCCAGCCGAAACTGCAACTCCTCCGACAGCTCCCCGCTGCCTTCGTCCCCTTCGTCTTCCCGCAGCCCGTCCCCTTACTCGGTTTCATCAGAGGACGGTCCGGAGGAGACGAAAGATAAACCTGCGTCAGACTCTGAACTTTCCCAAAACTGCTCCAGTTCTGGGAAAAATACATCCAGCTGCAGCGAGGAACGCAAGTCTGCGAGCTGTAGTCACAAACCCAAAGACCCTGCGGGACAGAATAACGACGTGCGCTCCCAATCCGCAGATTCCATCGAAATCCAGATTAAAGGCCCCGCCTGGATGCCAATCCACAACGGGAGCGTCAAATACCATCCCTTCcacccttcctcctccttcgcGGTGAGATCTGACTGGGCTCCAACATCTACCTCTAGTTTCAGCAAAGTAGTTCCCAGATCGGTGCAGCTTCTGCGGCCCGCTCCCATTCGGCCGTCTTATAAAACCCCCCAGGGCAGGCTGATGCAGCAGGACGACTCTGTGGCTTGCGCGAAGAAGCTGAACAACATGTCTACGTGGCTTTATCAGACAGAGAAGAGGGAGAAATCCAGGACAATGCTACAAAAAGTTCCTtccatgcagcagcagcagagtctGGCCCACTCCGGCGCCAACCTGCCGACGTCGTGCGTCCTTCAGAGCTGCGACAAATCCGGGAGAGACTTACGGCACCAGCCTTTCTTACACCCTGCTTTTATCCCCAACAGAACGAGACTACCTCAGTCTCAGCTAGTGTACCGTCACGTCCCGATGAGCCCGGCTCACTCTGCTCTCATTGGGTCTGCCGTTTACCCCTATCAGTACTCCATTCCTCTGTTAAACCCCCAAACCTGCTACACCCTACCTGCCATGCATCCCATTTACTCTCACAAGCTGTGATTTCTTTTGCTTTTTAATCTCCAGGACTTTCATAAACACAAGAAGCATCACAGTTGAGCTTTAAACTGAAGAAGGCAGACATTGATATTTGTTGGTacacttttctgtttttgtgattaatGCCTACCGTACACTctgaaaacactgaaaagaCGTTGAAAAGATTAAAGtgtgacaccatctcacatctaaagac
>XM_039802700.1
CCCCacaaagatgtgtgtgtgtgtgtgtgtgtgtgtctctgtcaaGACCGCCAAAATCACCATGaacctgggtgttttattttgaaatgtgcttAATTTTTGTAAAGTATCCAGCTGCTctgtggtcttcctgtatgtgattacctgcctATCTTGACACATACGCTCGCCTATCGCGCAGTACATAGAGGAGACGCCAAATCTATCGCTGCAGCGTGCGGGGCTGacggacagattggataacatggaCGCCGAAATAAAAATAGCTGCGCTACGCTGCTCAAGAGGACCAGAGTGAGACGTCCCAACAAACTGCGACCAGTGACGAGGACAAGGGGACAGGAACGCAGGCTTCTCCCTCCGTCATCGAGATTCACGACTCCATGACCGAATGCGAGGAAGACGCGGCGCCCAGCCCGGTGCAGATGGAGGAGAAGGCTTTTATATCGAGGCTGCACGCGTTCATGAAGGACAGAGGAACGCCCATAGAAAGGATCCCACATCTGGGCTTCAAACAGATTAATCTTTGGAGGATCTACAAAGCTGTTGATAAACTAGGGGGCTATGATTCGGTGACCGCACGGCGTCTTTGGAAGAAAGTGTACGACGAGCTGGGAGGAAGTccaggcagcaccagcgctgCTACGTGCACTCGCAGACACTACGAGAAGCTGGTGCTGCCCTTTGAACGACACCTAAAGGGGGAGGACGACAGGCCGCTGCCCCCGAGCAAACCGCGAAAGCCATATAAGAGGAATTTGGATGCCAAGGTCGCCAAGgctgagaggaagaggaagaggactcCGTCGGACATGGAGATGGATTCAGAGATGGAGATTCTCAGCCAGAGAAGTCCGGAGGCTGCCTGCCAGAGTGAAGCGCCGATGCATCCTCACTCCGCTCTCTGGGCCGGCCCCTCTGACAGACTCCCCCCCGACTGCTCTCAGCCAAACCGAGTCGccaccgccgccgccgccgccgccgccgccgccctTTGCACGTCCGTCTACGCCCACCTCGTCCCGGTCCCCGCGTCCAGTCCTTGGACCGCTCATGTCCCGCCCGCTGTTCCCGGAGAGGTCATCTCTCCCCTGGAGAAGAAGAAGCGAGTGGCTCAGGCGAGCCTGAACTTGCCGCCGAGTCCTCACGGCGAGGACCGAGAGCGGCCGTCCGTCATCCACTGCTCCCAGTCTCCGGCGCGGGCTTCTTCCAGCCGAAACTGCAACTCCTCCGACAGCTCCCCGCTGCCTTCGTCCCCTTCGTCTTCCCGCAGCCCGTCCCCTTACTCGGTTTCATCAGAGGACGGTCCGGAGGAGACGAAAGATAAACCTGCGTCAGACTCTGAACTTTCCCAAAACTGCTCCAGTTCTGGGAAAAATACATCCAGCTGCAGCGAGGAACGCAAGTCTGCGAGCTGTAGTCACAAACCCAAAGACCCTGCGGGACAGAATAACGACGTGCGCTCCCAATCCGCAGATTCCATCGAAATCCAGATTAAAGGCCCCGCCTGGATGCCAATCCACAACGGGAGCGTCAAATACCATCCCTTCcacccttcctcctccttcgcGGTGAGATCTGACTGGGCTCCAACATCTACCTCTAGTTTCAGCAAAGTAGTTCCCAGATCGGTGCAGCTTCTGCGGCCCGCTCCCATTCGGCCGTCTTATAAAACCCCCCAGGGCAGGCTGATGCAGCAGGACGACTCTGTGGCTTGCGCGAAGAAGCTGAACAACATGTCTACGTGGCTTTATCAGACAGAGAAGAGGGAGAAATCCAGGACAATGCTACAAAAAGTTCCTtccatgcagcagcagcagagtctGGCCCACTCCGGCGCCAACCTGCCGACGTCGTGCGTCCTTCAGAGCTGCGACAAATCCGGGAGAGACTTACGGCACCAGCCTTTCTTACACCCTGCTTTTATCCCCAACAGAACGAGACTACCTCAGTCTCAGCTAGTGTACCGTCACGTCCCGATGAGCCCGGCTCACTCTGCTCTCATTGGGTCTGCCGTTTACCCCTATCAGTACTCCATTCCTCTGTTAAACCCCCAAACCTGCTACACCCTACCTGCCATGCATCCCATTTACTCTCACAAGCTGTGATTTCTTTTGCTTTTTAATCTCCAGGACTTTCATAAACACAAGAAGCATCACAGTTGAGCTTTAAACTGAAGAAGGCAGACATTGATATTTGTTGGTacacttttctgtttttgtgattaatGCCTACCGTACACTctgaaaacactgaaaagaCGTTGAAAAGATTAAAGtgtgacaccatctcacatctaaagac

Function

NR:

description
AT-rich interactive domain-containing protein 5A-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802699.1 False 2110 mRNA 0.56 7 38600352 38620463
XM_039802700.1 True 2304 mRNA 0.55 7 38600352 38617135

Neighbor

gene id symbol gene type direction distance location
gins4 gins4 coding downstream 21004 38560362 ~ 38579348 (-)
zgc:77112 NA coding downstream 47175 38549620 ~ 38553177 (-)
polr3d polr3d,LOC102786318 coding downstream 83066 38495608 ~ 38517286 (-)
LOC120560824 gpat4 coding downstream 106344 38457568 ~ 38494008 (-)
trnaf-gaa_7 NA coding downstream 164862 38435418 ~ 38435490 (-)
dbnlb dbnl,LOC102783933 coding upstream 16553 38637016 ~ 38657534 (-)
ube2d4 LOC104946535,LOC101482088,LOC101172587,LOC101069170,LOC108236573,LOC107393720,LOC103397347,LOC104935329 coding upstream 41606 38662069 ~ 38673892 (-)
zgc:153044 LOC104946530 coding upstream 225224 38845687 ~ 38847953 (-)
mn1b mn1,LOC102781903 coding upstream 746214 39366677 ~ 39394822 (-)
LOC120560407 ttc28 coding upstream 829470 39449933 ~ 39841426 (-)
G67926 NA non-coding downstream 153566 38445979 ~ 38446786 (-)
G67920 NA non-coding downstream 185816 38414205 ~ 38414536 (-)
G67897 NA non-coding downstream 201260 38300289 ~ 38399092 (-)
G67911 NA non-coding downstream 214291 38362050 ~ 38386061 (-)
G67870 NA non-coding downstream 395587 38203059 ~ 38204765 (-)
G67954 NA non-coding upstream 13297 38633760 ~ 38655974 (-)
G67964 NA non-coding upstream 97775 38718238 ~ 38718758 (-)
G67969 NA non-coding upstream 162376 38782839 ~ 38785317 (-)
G67972 NA non-coding upstream 204828 38825291 ~ 38825971 (-)
G67976 NA non-coding upstream 206207 38826670 ~ 38917447 (-)
LOC120560036 NA other downstream 255556 38336088 ~ 38344796 (-)
G67577 NA other downstream 1045585 37535859 ~ 37554767 (-)
G67523 NA other downstream 1255269 37344461 ~ 37345083 (-)
adrb3a adgra2,LOC104963277 other downstream 1273951 37229742 ~ 37326401 (-)
G67483 pdlim2,LOC104963286,LOC103470528,LOC100702294 other downstream 1448706 37098792 ~ 37151646 (-)
LOC120560826 pitpnb,LOC104952320 other upstream 789776 39410239 ~ 39461568 (-)
G68717 NA other upstream 1314909 39935372 ~ 39935846 (-)
LOC120560061 NA other upstream 1379543 40000006 ~ 40026743 (-)
ppp2r2aa LOC104921711,LOC103356615,LOC108236503,LOC104961741,LOC106520125 other upstream 1692906 40313369 ~ 40330695 (-)
G68952 NA other upstream 2303611 40924074 ~ 40950607 (-)

Expression


Co-expression Network