dusp2 (dusp2,LOC106948589,LOC103145864,LOC102224120,LOC103470063)


Basic Information

Item Value
gene id dusp2
gene name dusp2,LOC106948589,LOC103145864,LOC102224120,LOC103470063
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 25949454 ~ 25952579 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802774.1
TTAACAGACCTGACGGAGAATTCAACACGTGCTCtctaaatatatttacagtagaTTTTAAAATCATCTCCAAAAGTTCTTTATTATCTTAAAATTCGCACAGAAAAACACTTAACACggatttatctttttattttttgagagCCTATTTTAGTTGTTAAAAACAAATAGGTCTTGCTTATTATTTATTAGTTTTAACTTGTTTTAAATAGACTTTTTTTCAGCCATGACTTCAAGCAGTGAGCCTTTGGAAATAAGTGGCAATGAGCTGGTTCACATACTCAGGACCCCCCGGGAACAGTACACCTCTGCTGGCTGTGTGGTGCTCGACTGCAGACCTTTCCTCGATTTTTCTTTAACGCACATTTGCGAGTCCCGAAACGTCAACTGGAACTCAATGCTGCGTCGTAGATCCAAGAGCTCGGTGGTGGCTCTGGAGTGGCTCATCCCGGACAAGGCGCTGCTGGGCCGGCTGCGCCGCGGGGAGTTCTCcccggtggtggtggtggtggatgaGAGCAGCCGCTCCGTGGCCGAGCTGAAGGCAGAGAGCGTGGCCCAGATGCTGCTCACCGCCCTGCAAAACGAAGTTCAGACGCAGATCTGCTTTCTGCAAGGTGGATTTGAGGGATTTTCAGAGGCCTATCCAGAGTTCTGTTACAGCTCAGCCAGCAATCCCCTCTATGCAGTGGAACCAGAGCAAACAGTGACAGGTCGGAGGACCCCAGCATATGATCAGGGTggtccagtggagctgctgcccTTCCTGTTTTTGGGCAGTGCCATCCACTCCTCACGCAGAGAGACCCTCGCAGCTGCGGGCATCACAGCTGTGCTCAACGTTTCCTCCACATGCCCTAACTTCTATGAGGGGGAGTTTCAGTACCTGCGGCTCACTGTGGAGGACAGCCTAGCTGCTGACATCAGAGCCTGCTTCTCCACAGCCATTGCCTTCATCGACTCGGTGAAGCAGAGTGGTGGTCGGGTGCTGGTGCATTGCCAGGCGGGTATCTCCCGCTCTGCCACCATATGTCTGGCCTACCTCATGCACACGCAGCGTGTCAAGCTGGATGAGGCCTTTGACTTTGTGAAGCAGCGGCGTCAGGTCATCTCCCCCAACCTGGCCTTCATGGGACAGCTGCTGCAGTTTGAGACTGATGTGCTCTGCCATGGATGAAGACCACAGGTCGCATTCTTTTCAATTCATTCTCCTGCCTCTTGCAGGCGTTGACTTTATCAGCCGTTATCAGCACTTGTATGTACTGTTTGTACTATTGAAACTAGTATATTTCAGAAGTATATGCTTTGTACATTCAGAGAAAAGCTAATTGTGCTGCTGGCATCACATGGCCAGTGGATCTGAACTCCTACTTTTTAGGAGAAACTGACAAACGGCATTTAGCAATATAAACTTGTTATGAACAATTGTGATTCTGAGCCAGCAAGTTGGAGCAGCTATGAGGTaatttccctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttttgtttaacttATGTGCCTGATCTTTTGCAAGGACTGTCTTATATTTCTTCACATTTACGACCACTGTGACATGACAGATCTTTTTATGAGACAACACTGTGTTAACTACTTAAGGCAATACTGGATGAATCTCAAGTTGTATTGTctactttataaaaaaaaatgcactaaCCACTGTTTGTGTCATTGCATTCTGTTTCCTGAGATGGATTACACTTGGTAAACTCAAGCtggaagatgttttttttttattttttttattatgtatgtaatagaatttttgtttttatttatttcaacagtTGTTATGACAGTGTAGCATTATTACTGTCCATTACTGCACTTTAAAGTTTGGCTGATTCCTGCTGTTTTTTccactaaaataaaaacatgctgGAGAACACA

Function

symbol description
dusp2 Predicted to enable MAP kinase tyrosine/serine/threonine phosphatase activity; mitogen-activated protein kinase binding activity; and protein tyrosine/threonine phosphatase activity. Predicted to be involved in endoderm formation; peptidyl-threonine dephosphorylation; and peptidyl-tyrosine dephosphorylation. Predicted to act upstream of or within dephosphorylation. Predicted to be active in cytoplasm and nucleus. Is expressed in hindbrain neural plate; mucus secreting cell; nervous system; and presumptive rhombomere 4. Orthologous to human DUSP2 (dual specificity phosphatase 2).

NR:

description
dual specificity protein phosphatase 2-like

GO:

id name namespace
GO:0035335 peptidyl-tyrosine dephosphorylation biological_process
GO:0000188 inactivation of MAPK activity biological_process
GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG:

id description
K04459 DUSP, MKP; dual specificity MAP kinase phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802774.1 True 2009 mRNA 0.46 4 25949454 25952579

Neighbor

gene id symbol gene type direction distance location
LOC120560362 izumo1 coding upstream 117 25939776 ~ 25949337 (+)
LOC120559963 LOC100704176,LOC102304428,LOC102794704,LOC102195896,LOC101487439 coding upstream 165417 25774378 ~ 25784037 (+)
LOC120560092 LOC101464110,LOC102227132,LOC106956827,LOC106513657,LOC105931341,LOC103374419,LOC101075487 coding upstream 186548 25757088 ~ 25762906 (+)
LOC120560772 pdxp,LOC102792570 coding upstream 289993 25655685 ~ 25659461 (+)
LOC120560771 ugt3a2,LOC108233592 coding upstream 296298 25647115 ~ 25653156 (+)
adra2b LOC104943288,LOC102796455,LOC102308546,LOC103357149,LOC102212827,LOC100694621,LOC101484392,LOC105931407 coding downstream 6220 25958799 ~ 25964487 (+)
gpat2 LOC101483931,LOC102796756,LOC102305881,LOC102195621 coding downstream 28329 25980908 ~ 26161608 (+)
zgc:152830 LOC103357146 coding downstream 221645 26174224 ~ 26180116 (+)
pcna pcna coding downstream 228432 26181011 ~ 26184360 (+)
kcnip3b kcnip3,LOC102307840,LOC102210345,LOC104951840,LOC103397788,LOC101482209 coding downstream 244661 26197240 ~ 26245476 (+)
G64677 NA non-coding upstream 20296 25928924 ~ 25929158 (+)
G64663 NA non-coding upstream 27066 25922163 ~ 25922388 (+)
G64658 NA non-coding upstream 31361 25917765 ~ 25918093 (+)
G64657 NA non-coding upstream 31978 25917187 ~ 25917476 (+)
G64643 NA non-coding upstream 32562 25915944 ~ 25916892 (+)
G64764 NA non-coding downstream 351271 26303850 ~ 26321956 (+)
G64834 NA non-coding downstream 559886 26512465 ~ 26514759 (+)
G64836 polb non-coding downstream 579173 26531752 ~ 26533420 (+)
G64838 polb non-coding downstream 582433 26535012 ~ 26537695 (+)
G64839 NA non-coding downstream 585689 26538268 ~ 26538541 (+)
LOC120560359 NA other upstream 20858 25926087 ~ 25928596 (+)
LOC120560031 LOC104941040,LOC103357154,LOC102795853 other upstream 33877 25914279 ~ 25915577 (+)
LOC120561182 LOC104948667,LOC104930137,LOC103397628,LOC103366370,LOC107092578,LOC102226292,LOC106956829,LOC106919698,LOC103470079,LOC103141747 other upstream 252878 25684964 ~ 25696576 (+)
cdc14b cdc14b,LOC102776968,LOC103141798,LOC106948523 other upstream 1112006 24823718 ~ 24837448 (+)
prxl2c aaed1 other upstream 1126388 24821314 ~ 24823066 (+)
nsd3 whsc1l1 other downstream 406541 26359120 ~ 26383843 (+)
G64814 cldn5,LOC103357131 other downstream 460290 26412869 ~ 26414597 (+)
c6h22orf39 clg12h22orf39 other downstream 541705 26494284 ~ 26496987 (+)
cltcl1 LOC100691387,LOC103359525 other downstream 661658 26614237 ~ 26644167 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other downstream 692082 26644661 ~ 26661895 (+)

Expression


Co-expression Network