niban2b (LOC106585213,LOC107560233,LOC107715759)


Basic Information

Item Value
gene id niban2b
gene name LOC106585213,LOC107560233,LOC107715759
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 11641802 ~ 11715948 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802867.1
AGGGTGTGTCTCTCCGAGAAAGTCAGTAGTGTGTCACTCGGCTAACATTTTTTCTTCCCCCTACCTAGGCTACTTGTTTGCTACCGCCCGTCTCTTTGCCAAACTTCAGTCAGttcaggttatgttggagaggAGGTGAAAGGGCTTCTTTAGGAGTCTGCATTACTCTGAACTGATTTCCCTGCGTTTGTCTTAATAACGTTAGTTATAGATCAGTGGAGCCAATCGGGGATTTTGAGTTTCATCCACCATGGGGGACGTGATTTCCAGTCACCTGGATGAAGCCAAGCGTGAGATTATCACAGctcggaccagcgaggtgatggtGGAGTTTGGGCACCTGTATGAGAAGCAGTATGCTGTGGCTCTCTTTAACAAAGTTCGCTTTGACATAGAAGGAGGAGGTGGCCCACAACCCCAGCTACTACACCGCAAGATTCCTCTGGAGAACAAAGCCATCTTCTCTGGCTCGCTCTTTCAGTATCTGGAGGAGAACAAGAAATGGAGGAACCGCTTCATCTTCGTTCCAGACTCCTACAACATCAACTATTACGACAGCAAAGcgGCCCATGAGAGACACCTTCATCCCAAAGGAACCATCAACTGTGCCGGCTACAAGGTGCTGACATCTATGGAGCAATACCTCGATCTGTTCAGCAACATCCTACCTGGTATAAAAGCTAAGGTGGGAAGTTCCCCTTTCCTTAAGTGTGCCACCCAGTTCCCTCTGATCCTTTGGCACCCTTACGCCCGCCACTACTACTTCTGTGTGGTGACGGAGAAAGAGCAGCAGAAGTGGCTCGCTGTCCTCCAGGACTGTGTCAGACATGCTAATGATGGTTTGTCAGAGGAGAATAAAGTCCAAACACCTGCCTTCACTGATGCTGTACGACTCTACCGCCAAGCTAAAGGGCACTATGGCACCTGGGACATGATGTGTGGTGTACTATCACAGATTCTGTCAAATCTGGTGATGGAGGAGGCCCTCCCTGAGCTGAGGGAGCTCATCTCCCCACGCCTTAAAGGTAAACTACACGAGAGGCAGAGAAACTGGATGCTGattagTGATGCGGTGTATAGCCTGGTGCAGGGGCAGTGCCAGGCCCAGTATGAGGCAGTGTTGCAGAAGTGTGAGGCGGCCTGCTCCTCTCTGGAGGCCTCCATACGAACAGACATGGACCAGATCATCACCTCCAAGGAGCACGTCACCAACAAGATCAGAGAGGTGGTTCTTCCCAAAGCTGAGAAGCTTCTGAAGGTGAGCATCCAGCCCTACATCAGCTCCATCCTGGATGCCCTGATGGAGCCAACCAGCCGAGGTTTCTCTGAGGTCCGCAATGTATTCTTCAGAGAGCTGGTGGACATGAGCAAGAACACCCTCAATGAGGGCACCAAGGAGAATGTGGCACAgcaCATGGAGAAGATCTCCATGCTGGCCTTCCATCCGGTGAAGATGCAGAGCTGCTACGAAAAGATGGAGCCACTGAGTCTGGAGGGTCTGCAGCAGAGGTTTGATGTCTCCAGCCCCTCAGTGTTCGTCCAGAGGGCTCAGATCCTCATGAGAGAGCAAATGGATCATGCAGTGTATACATTTGAGCAGATCCTTCACCAGAGTCTGGAGTCTCAGTGCACAGAGGAGCTCTGTAAGTCCATCCAGCGCTGCCAGGACAGAGTCCTTAAGAAATTTGACTATGACAGCAGCACAGTGAGGAAGCGTTTCTTCCGTGAGGCTCTTCTCCAGATCTTCATCCCCTACATGCTGAAACAGCTTAGCCCCTCCTGTGCATCGGAGCTGCCACACTTCCAGGAGCTGATCTTTGAGGACTTTTCCAGATTCATTCTGGTGGAGAACATTTTTGAAGAGGTGGTGCTGCACTCTATGATGAAGGACATCACGATGGCTGTGAAGGAGGCGGCGGTCCAGAGGAGACACAACCTGTACAGAGACAGCATTGTCCTCAGCAACAGTGACCCCAGCCTGCACTTACTTGGAGAAAACCCCTCCATCGACTGGGCCGGGGAGTACGGAGAAGCCCAGGAAGAGGCGGATGGAGCAGGGAAGGACACGGAGTGTGGCGGTGAGGGTGAGGTTGGGGCGGCCCAGAAGAGAAGGAGGATGAAGCAGGTGGTGTCCATGATCCAGGTGGAAAGCTCCCCAGTCCTGCCCAACGAGTCATGCATGGAGGTGCCTAGTGTCAACGACATCCCAGAagaggatggagaggaggaggaggaagaggaggaggagaaggatggAGATTGGGAGGAGAACTCTGATGATAAAGCTTCTGCTGACCAAAATGGATCTGCAAGTCCCAGAGCTTCAGAGAACCCTCCAGACTTGTCAAATGGTTCGGTCTTGAAGGAAGATGAAGCCAAGTCAGAGGAGCAGGGTAAAGTCCCACAAAAGGTTGAATCTGCTCAAGAAAGTGCTTCAGTCGTGGAAGAGAAGGGTAAGGGAGGGGACAACCTGCCGATGTTGGAGGAACAACCGCACTCCGACCAGGAGGTGTCAGAGGAGACATTGCCACCGCCACCTGAGGAAATCCTATCTGGAGCTACAGAAACTGCTCCAGAGAGCCTCCCAGAGGCAACATCTGACTTCCCTTTGCCTCCACATGACGATAGTGGCTTCCAGTCTCCCACCAATGAAGGGGGAGAGGCAGAGAACGACGAGGAGGATGTGGCCCCTAGCACAGCGGCCCCACAGCCCTCAGAGGAGCACCCTGAGGTGAGGGAGACTAGTGTTGCTACAGCGCCAGGAGCAGAGACCAAAACCGGTGACCAAAACCAGTGATTCTGAGACAAGTAATGAAATTATTTCCATTTGTTAGACCTAAACGGACTTCTGctctggttttatttttattatttttctttatttttttgaccGAGATTAAAACGCTTGACACATGCTGTTTTAaccatatcatttttttttttcagttttaggCACAGTAATCATTtatatcagatttttttttcaccgaGCAGGGCTCAGGTGCACATGCACATATCGTTACATGCTGTTTTTCTgtatcattttcacaaatttgCATCCGACAGAAAATCCTCAGCAAATTCTGAGCTTTCAATCCACatatgtttcatgttttattttctcttcacCTAGTATTAATGTAAGCACAGTGGACGGCCTCGGGTAAGGAGTGGTGAGTTTTCAGCATGACAAGTTGCAAGAACACCCCGGTTTGATTTAGGTCTTAATTCTATCTTGTTTAACTACTGTGATGCCTTCAATAACCTTCAGCAATTCGTtttttagttgttgttttttttacatttgttggTCTATACACAGTTATTAGAAACTTACTTATTGGTTAACAGAAAATACTTTTAAGAATGTGGAAAAGTCTCAAAGttcattttcttttccatctCAAACTTGCATTACACTTCATTAAATTGCCTCAATGTACACATTGACATCTTAAGACTTGACTATTTCTTTTGTGTTGGTAAAATAACACTATTTTATAAAAGTTTATCACTTAACAAAGTAAGCTtgtgtatattatgtataaATACTTATATGGACCAGTGAACTATACCAGACTGTCATTTTACATAATTTTATATAATTGTATAAGTGCCTTAGCTGATCTCTCCAaccctattttatttattattttgtaacCCCCCTTCTTTTTTGACCAGTGTActtttagatttattttactCTTGGGTGATGCAAATGACTGTTATTGAGAATAAATAATTATCCATAAATGATCA

Function

NR:

description
PREDICTED: niban-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802867.1 True 3759 mRNA 0.47 14 11641802 11715948

Neighbor

gene id symbol gene type direction distance location
npdc1b npdc1 coding downstream 2364 11608619 ~ 11639438 (-)
LOC120561251 NA coding downstream 286896 11351854 ~ 11354906 (-)
sdf2l1 sdf2l1,LOC106531766,LOC106570867 coding downstream 472475 11160449 ~ 11169327 (-)
top3b top3b coding downstream 549840 10986105 ~ 11091962 (-)
ppm1f ppm1f coding downstream 673598 10807831 ~ 10968204 (-)
noxa1 LOC103359690 coding upstream 365551 12081499 ~ 12116241 (-)
man1b1b LOC103359688 coding upstream 442685 12158633 ~ 12220357 (-)
LOC120560512 NA coding upstream 537219 12253167 ~ 12293788 (-)
ehmt1a NA coding upstream 841619 12557567 ~ 12600992 (-)
arrdc1a LOC103353853,LOC104923796 coding upstream 894468 12610416 ~ 12635123 (-)
G60817 fut7,LOC103353858 non-coding downstream 65086 11571952 ~ 11576716 (-)
G60813 NA non-coding downstream 91055 11548060 ~ 11550747 (-)
G60805 NA non-coding downstream 149645 11491321 ~ 11492157 (-)
G60721 NA non-coding downstream 433889 11207608 ~ 11207913 (-)
LOC120560099 NA non-coding downstream 518894 11122553 ~ 11122908 (-)
G60857 NA non-coding upstream 7901 11723849 ~ 11724069 (-)
G60858 LOC103141940,LOC106938081,LOC103353854 non-coding upstream 12583 11728531 ~ 11766055 (-)
G60861 LOC102216235,LOC100712335,LOC107102274 non-coding upstream 53744 11769692 ~ 11779622 (-)
G60862 LOC103353854,LOC100712335 non-coding upstream 63991 11779939 ~ 11790338 (-)
G60866 NA non-coding upstream 94362 11810310 ~ 11810640 (-)
abca2 abca2 other downstream 48142 11285385 ~ 11593660 (-)
G60715 NA other downstream 452061 11189142 ~ 11189741 (-)
unc5db unc5d other downstream 1122835 10122152 ~ 10518967 (-)
tacr1a tacr1,LOC102799894,LOC100703444,LOC102196095 other downstream 2914359 8643403 ~ 8727443 (-)
G60145 NA other downstream 3239236 8401022 ~ 8402566 (-)
LOC120561001 whrn,LOC102797690 other upstream 185702 11901650 ~ 12061646 (-)
LOC120561038 LOC102778062,LOC101486272,LOC102199534,LOC108245630 other upstream 577759 12293707 ~ 12555285 (-)
G61264 NA other upstream 1873091 13589039 ~ 13589332 (-)
si:ch73-138n13.1 LOC102794857,LOC107084631 other upstream 2612203 14328151 ~ 14364326 (-)
trnaa-agc_14 NA other upstream 3223027 14938975 ~ 14939047 (-)

Expression


Co-expression Network