si:ch211-102c2.8


Basic Information

Item Value
gene id si:ch211-102c2.8
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 19518176 ~ 19532323 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802953.1
ACCAGAAGCTCCTGTCAATCAAGCACCGCAGCTCAGCACGGAAGAGTCAAGTTCAGCATCGAAGTCTCCGCGTTTAAACCCTGAAATCAGCCTTAACCAGTGGACACTGAGGATTTTGTGTCTGTATGGTACTGCTGAGTGGATACTGGATACTTGTCTTCAGCAACAGGCAATGGCTGACAGAGGCCATGGCAGAGCAGACAAAGATGAGCTTCTTTACCCAGATCTTCACAGCAGTGTGTCTGGACTGGACTCTCCTCCTCTCAAACTGGACCACTGTGACCTTCTCCTAGATGCTATTGATGCTCAGCTTGGTCAGCTGCAGGTCCAGCCCCAGAAACATCAGGCAATTTCTAGAGAGCATGATTGCAGTGATGCAGCTCCTCTCAACTGGAGTCAATCTCTGAGCAAAGACACAGGGCTTGGGAGTACTACTCAAACAAATGACATTCCTATTTCTTGTCTTGATTTGATAAACACTCTGACAATGGAGCAAACATCagAGAGTAGCACAGGTTGCCAGGACGGTCCCATTACTCATGAGGAAAATAAACTGAAATTGGACAGAAGGACAAGAGACAAAGAGGAAATAGAGACTCAGAGGGAGCAGGTGATGTGGAGGCTCCAGAGGCTGCTTGGAGAAACCTGTAACGAGGGAAGCATGACAGGAGTAACCCACCCTCCTTCAGACAGCATCTGCACTGAGGACTTTGTCCGATGCTTCAGAGATGAAATGGTTGAATTGGCATTGCCAGTGAATAATGTGCAGCAACTTGACAAAGAGGAAGAGGCTGAGAGGACAGAGATACTTGACTGTGACACTTGCCAGAGTGAACAAAAAGGACACTGTATTCTTAATGTCGACAGAAGAGGAACAGCAATGACTGGGGAAAgcaacaaagacacagagacggCTCACTATTGTCAAAGAAAGGAACTGGAGAAATGTCTTTATGACGGCTATGGAGTTAATACATCATGTAGTGAGCAAGCAGGAGCTGGAGAGACATACAACACACCACAGAGGCTTGGTGATGATGGCAGTAGCAtcCACAGAACAGAGATTGTAACAGAACATGAAACCCTGTGGCAGAACAGCCGTTCTCCTAAGACCAGGAGCTTGGCAGGAGTACCTGTGTGGAGTTTTGACACCGTGTCCATTGACAGTGACCTTGACTCAGTCTGCACAGAGCAAGTCAGGCAGCATATTCACAGGCAAACAGGATGGcgctctctcactctgtctgtcaCGGGCATGGATGACTACTGTACCAACCAGAGTGACAacgacacacccacacaggaaGAAAGTGAACCTCAATCTACATCAGGCCAAAGATCCTCTTATGGAAATGTACATAACAGAAGTCCTTCTGTCAGTAAAGCACAGCGCAACAAGAGAGAAACTTACAGACTTGTGTGTTCTTTGGAGGAAAATGACAATGACACAGATGAGGAAATGAATCACTGGCCTGAGAGGACATCAGATAAGATGCACTCTGATTGGGCGAAGATGAAAGAGCGGCTCTCTACACTCCGACAAaaatgtgaaaaggaGGAGCAGACACTACAGAACAAGAAGACTCAGTTAAAAGATGTTGAGCTCTGCCTCTCTGAACTTCAACACAGAAGAAAGCATGCCTTGCAGGAATTAGAGCAACTGACTGTAGAGACAGCAAagatggagaaggagaggaggactCTGGAGTTTGTTCTGAGAGACAGAAGGGCAGGGAAAGACTCTAGTTGCCAGCTGCATGAGCTGCAGAGGCAGAGAGCGTCCTGTATCCTCGAGATGAGAGACATGAAAGAAGAACTCGCAACTCTGAGTCAAAGTAAACAGACTCTTAAGGATTCGGCCTTCACGGAGAGGCCCAGTGTCGTCATGTCAGTgctggagagagaggagatggaAAGACAGCTGGATAATGCcaaaacagaactgtttgcTGAACAGCGACGTGCAAGAGAGAAGCAAGAGTCCATGCAAGAAAAGTTGGAGGAGACTCGTGAGGAGCTCCAGAGGGtcacagaggcagagagtgtaCTGAGGAACAGCTGTACTTGTCTGGAGGAGAAACAGAGGCAGAAAAAGGATCACATCGAGGCGGTAGAGTTTCAAGTAAGCGAGCTGCAGGGTGAACTGGGAGAATGCAAGATCAGAGTGGGCACTCAGGAGAAGATGTTGGCTCAGAAGGAGCTGCAGCTACTAGATTTACAGGAGCAACGTGGGGCCTTACAAGCAGAAAGTGATAGAGTGAAGAGGGAGCTACAACACCTGAAAACCCAGCACCGCAATGCACGGAAAGAGGACCATGAGCAAGCTCATAGAATGATGgagGCAGCATTAAAGCAGCAAAAGAAAGAATTGGCATTGGCTCATGAGCAGCAAATCCAAAAGGTTAATAAACAGACTAAAGAGGAAAAGGCAAACGCTTTGAAAGAACAAGCTCTGTCTCTCACACGACACATTGAGGCCTTGAAAAGTTCCATTCAGCTAAAAGAAGAAGAGGCAAAGAAGCTGAGGGATTCTCTGGAGCAGCAGAAGCAGGAGGCAAAGAACCGTGAAGAAGAGCTGCATGTAGAAGCTTTGGAAAAGGTGCACAAAGCaatagaggaggagaggaggaagtgggaGGCAGAAAAAGTGGAAGCAGTGCAGGTGCACTGTGGGATACTGGAAGAGCAGAATAGAAAGAGGCTGAAAAGCATGAGGAGTGAGATGCAGCGAGAGAAGAGTAAAGCACTGGCTCTTCAACATAAAATGATGGAACTAAAAACTAGAGTACAGGAGATGGAGAGTGAAAGCTGTGCAcagcagagagagcaggagTCTTTGCTGGCTGTTATTTGCAAATCACTGAAAGAGGAGCATCAGGAGAGTCAGAGGGCAGCGCTGCGGCTCGAGGAGGCTGCTCAGCTGGCAGAGAAAGAGGCTGACAGGCTCCGGGTGATGCTtgaagaaagggagaggagcCATAACCAAATCACAGCTGAACTGGACCAGCAGCTCAGGCTCTGGGCCAAGGAGCTGGGAGCAGAGTGCCAGCATCTACACCTCTTAGTGGAGCAGAGTGGAGCCAAACAAAGTTCTGTGCACCTAACTCCCAGTCCTACAGCAGCGGAGGCTCTAACAAACCTGAGAACACTAAGAGAGCAGTTGAAGCAATTGATAAACCATCTACAACAGGAGCTTGATTCACAGAAACAAACCACTGCGCAGCTGAGAAAAGACAAGgAGTGCGAATTGAGCATCcagaggcaacagctgaggatGAACAGAGACCAAGCCTTGGATTCTCTAAAGGAGCGTCTCATTCAGGAGCACATTGAGGAGTTAAGCAGTCTGAACTGGCCTCATATGTGTGATGGAGGGGCTGAGGGAGGAGGAGTGGCAGCATCACTTCGCAAACAGCTGAAGGCCAAAGACCTGGAACTCAGGCAGGTTCAGAGGAGCATGGGTCAGTGGAAGGAACAGACTGCAGCTCGTCTGGCAtgcaagtttgaagaagagtTGACAGCGGAACTAGAAAGGTGCAAGACAAAGTTGTTAAGGTGCAGAATACCATCAAAGACTCGAGAGGAGAGTCAGAGAAAGTGTGAGAGGCCTGAAGGACAGATGATGTTTAGTGCAAAGGAAGCTCAGAATTCGGTttgctctccctccctccatgtTGTGGCCTCTGCTGCCTCCCACAGCCCCTCAGACGTGGCTTCATTTAAGCTTCTACGTTACCTCCAGAGCAGAGTCAAGCAGCTCCGTGTAGAAAACCAGGCCTACACCCAGAGCCCATCGCCTTCAAACACAATCCCTTTAGATTTGGCAGGATCCTATCTTACAACAAAGCACCACAAGAAACAAGACACATCATCCCAAACTAGCTGCTTGTCCTCGATCACTCAAGGTCAAGCCGTTCCTGGGATTCAGAGTCACTCATCCATCAGGACAGTCTCAAGTTAAGGACATGAAACCTATGTGTGTTGCAAACACCAGTGATATAATGGAATGCATTTCAAGCTATTTCCTGTGGCCAGAGAAATGAATCATTTACGGTTACATGTACTTAAGACTGCAGGTTAACGAGCAGGTCACAGTGACAAATTACACAACCCAAGATTTGGTCATTAAGTTCCCATTTTTCTGTGTTAAGGAAGTTCAGTTTTATGGCTTCAGGTTACAGTAAACTCTGAATAAGCGATGAGCTGACATTTCACCAAAGATCATGTGAGTTATGTCAGAGAACCTCATAAAGCTGACAGGTCTTTATGGGAACCCTTTGTATGATCATAAATGTTACAAGATGTTAAATTGTacacaaaaacagttttgtaGATTGCTGGCAAGTTCAAACAAAATGATGTCGTCAGCATTTAATATAAtgacttaaccctcctgttatcctCAAATTTACTAACATCTGTTATCCTTGGGGTGAATTTGACCTCCAGAAAatgttggtaattaaaaaacTTTTACCAAATATTTATGTTGATAGCCTAAACTGGCAACTAGAAAATGTTGAATGTTATCTTCCCTCCCTCACAGAGgatgggtgcgtgtgtgtgtggggtgggggtagGGGAATTGAAGATTGTGAAATTGCAACAACCTGCATGTGAAAGTGACCTCAATAACAGCCAAAACAATCTCAGcaaatttgtgtaaaatgttcatATTTTCTATGTATTTTACAGCTAAAACAGcctggggtcaaattgaccccaaggaACACCGATGtgtacaaaatgcatacagaacATTGAAAATATATCATCATGTTAATTTTATGTTTACCCAGTTGTCCCCATTAAATTAGGAAAAGTCATTCaatatgaagcaaaaaaaaatgatgtcaaGCACTTTTTTAGAGATGTTAAACATTGaatggggtcaaattgaccccaaggataacaggagggttaattaactttgttttgtttcatcttAATGTAAAATAATCCGCTGGGACTGACTTCACATATTTTAAGGATGGTTTCCCTATAATCACTTCTGCTATCACACATGCAATCTGTTATTTTCAATTTGTTAGCCATGCTCCGGTTTTACAAGGCGTTTCAGCAGGCTGGAGTAGTTGTGTTGTTGGTTCTCCCTCTGAgatcaaaaatgtttaaaaaggagAATGTAGGACCAGCGCCTATTTATAAAACTACTATTTGCCAAAACATAATTGTCAGCATAAGTCTTGTTATCAGAGCTGGCCCCAACTGAACTGATCAATAAAAATC

Function

NR:

description
PREDICTED: trichohyalin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802953.1 True 5247 mRNA 0.46 31 19518176 19532323

Neighbor

gene id symbol gene type direction distance location
osbp2b LOC104966002,LOC107394196,LOC103353525 coding upstream 13632 19454248 ~ 19504544 (+)
ap1b1 ap1b1,LOC102786025 coding upstream 90459 19399883 ~ 19427717 (+)
gas2l1 gas2l1 coding upstream 118923 19376194 ~ 19399253 (+)
ewsr1b ewsr1,LOC102785556 coding upstream 145567 19364006 ~ 19372609 (+)
emid1 emid1 coding upstream 161030 19298555 ~ 19357146 (+)
tcn2 NA coding downstream 3979 19536302 ~ 19540034 (+)
dguok LOC104941578,LOC108234509,LOC102204634,LOC103375338 coding downstream 7927 19540250 ~ 19544265 (+)
spaw NA coding downstream 12006 19544329 ~ 19547286 (+)
sftpbb sftpb coding downstream 216878 19749201 ~ 19753977 (+)
selenom selenom,LOC100701119,LOC101070319,LOC101478641 coding downstream 267799 19800122 ~ 19806542 (+)
LOC120560789 NA non-coding upstream 364592 19151533 ~ 19153584 (+)
G62836 NA non-coding upstream 431314 19084934 ~ 19086862 (+)
G62796 NA non-coding upstream 535553 18966083 ~ 18982623 (+)
G62755 NA non-coding upstream 653369 18864575 ~ 18864807 (+)
G62741 NA non-coding upstream 745068 18772755 ~ 18773108 (+)
G63005 LOC104920315,LOC103374896,LOC100704901 non-coding downstream 17087 19549410 ~ 19554906 (+)
G63007 NA non-coding downstream 23060 19555383 ~ 19562350 (+)
G63015 LOC107394186,LOC104941583 non-coding downstream 43238 19575561 ~ 19633642 (+)
G63016 NA non-coding downstream 49649 19581972 ~ 19584473 (+)
G63029 NA non-coding downstream 123909 19656232 ~ 19656496 (+)
rasl10a rasl10a other upstream 69226 19430401 ~ 19448950 (+)
tmem119a LOC103353570,LOC104946818 other upstream 436522 19076561 ~ 19081654 (+)
mvk mvk,LOC102798305 other upstream 775777 18737518 ~ 18742399 (+)
acacb acacb other upstream 832713 18661157 ~ 18685463 (+)
tpcn1 tpcn1 other upstream 1043445 18441347 ~ 18474731 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 227273 19759596 ~ 19763524 (+)
vps13a vps13a other downstream 868624 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 941328 20473651 ~ 20490586 (+)
G63480 rbm19 other downstream 1144094 20676417 ~ 20677916 (+)
LOC120560787 NA other downstream 2056553 21588876 ~ 21599289 (+)

Expression


Co-expression Network