tcn2


Basic Information

Item Value
gene id tcn2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 19536302 ~ 19540034 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802955.1
TTGCTTTTCTCATGGCTTTGTCATCTCACATGACGagtcatgtgacagagaaataCTAGAAGCTGTTGGCTCTGACTCTGTTcttaccatagacagtatataaggttcTTACTCAGCTCGGATTCTTCACACTGGAGTCACTCTCTAACGAGGTTGCCCAGAATGCTGTCTTTGATCTTAATCACAGGCCTACTTGCCTTTACCTCTGGTAAACCATGTGATACTGAAGCCAACCGTGAGCCGTACCTGTCACTCAATAAGAATCTCCTTCGCTCTCTGGAGACGCCGGAAGGACTCCCCAATCCTAGTGTCCACTTGGCATTACGGCTTTCTAATTACCACAACCTCGCCAAAGAGAGCGAACACCTGAATAGACTGAACAATTATTTGCACAATAACCTTCAAAGCTCTCTCTCTAACTGCCAACCTGTGGTCGGCCTCATGGCGCTGTACAGTTTGGCTTTGAAGTCCTCCTGCTACGACCAGAACACAATCACCTTCACCGTCAGTGAGAAGAGTGAAACGCTGTTGACCCACCTGAAGAAGCAGATGGAACAAGAAAAAGAGCATATTGTCTTCACCCATCGCCCTTTGACCAACTATTACCAGTACTCTCTGGGTGTGCTCGCTCTTTGCGTGAACGGCATCAGGGTCAACAACCATGTCAGCAACAAGCTCATCAAGGCAGTAGAAAATGAGGACTTCAAACATGGAGACTCTGAGAGTATTGATACCTATGCCATGGCTGGAATGGCACTCCAGTGTGTGAAGAACGCTGGTTCTCATGTGCAGAACGCTGCTGAGCTCAACACAGCCCTTAGCAAGATCAAGCAGAAGATCTTGGCATCTAGAAGGACAGACGGTCACCTTGGCAATGAGTTCAGCACAGGCCTCGCAGTTCAAGCCTTATTGGCGATGGGCAGCCCATTTGCAGAGTATGCCACCTCAATGGAGGCCATGAGGATAAGCGCCAGAAACAACATATACCACAACCCCATGGCCATATCTCAGATCCTGCCAGCTCTCCAGCTGAAATCCTACCTAGCGGTTGAAAGCATGGGCTGCCTCAATGAGAGTGACACTCTAGTGCTGGAGCCCATTGATCCTGTGGTGGTTGTAACTAGCCAGACCAAAGTGACTGTGATAGTGGAGGTGGTAACGTCCAGCGGGGCAGCTGCTGTTTACTCTGTGGATGTGCCAAAGGATAGCTCTCTGTTGGACGCCCTTGAACTTCTCAAGACAACATATGTTGGCTTTACGTTTGAGACTGAGCCCAGCCTGTGGGGACCTTTCCTAAGTGTGGTGAACGGAGAGCAGGCCAGACAGAGCGACCGCAGATACTGGCACCTCTCCTCTGATGGCACTCCACTCAGTCAGgGTGTCAGTGATTTCAAGATCGAGGCGGCTCAAAAGATCACCATCAAAAACACAAGCTACTGAGAGTCAGTCACTGCAGATGCAACAGTGATTGAGGATCACAAGCAGTTCATTCCTTTGTCTATTCTTTGTTGTTTTAACCAGTGATTATACTTAAATTGTCTGATGCTATAAATGGTCATAGTGATTTCACtgaatttttttcatttcaagtAGGTTTGAAGCTTAAATAAAAGTCTAATTTAGAACTAATTGAACATACTTTGCAATGTAAATTAAAAAGctttggattttaaaa

Function

NR:

description
PREDICTED: transcobalamin-2-like

GO: NA

KEGG:

id description
K14619 TCN2; transcobalamin-2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802955.1 True 1675 mRNA 0.47 10 19536302 19540034

Neighbor

gene id symbol gene type direction distance location
si:ch211-102c2.8 NA coding upstream 3979 19518176 ~ 19532323 (+)
osbp2b LOC104966002,LOC107394196,LOC103353525 coding upstream 31758 19454248 ~ 19504544 (+)
ap1b1 ap1b1,LOC102786025 coding upstream 108585 19399883 ~ 19427717 (+)
gas2l1 gas2l1 coding upstream 137049 19376194 ~ 19399253 (+)
ewsr1b ewsr1,LOC102785556 coding upstream 163693 19364006 ~ 19372609 (+)
dguok LOC104941578,LOC108234509,LOC102204634,LOC103375338 coding downstream 216 19540250 ~ 19544265 (+)
spaw NA coding downstream 4295 19544329 ~ 19547286 (+)
sftpbb sftpb coding downstream 209167 19749201 ~ 19753977 (+)
selenom selenom,LOC100701119,LOC101070319,LOC101478641 coding downstream 260088 19800122 ~ 19806542 (+)
mthfd2 mthfd2,LOC103363193 coding downstream 343176 19883210 ~ 19887470 (+)
LOC120560789 NA non-coding upstream 382718 19151533 ~ 19153584 (+)
G62836 NA non-coding upstream 449440 19084934 ~ 19086862 (+)
G62796 NA non-coding upstream 553679 18966083 ~ 18982623 (+)
G62755 NA non-coding upstream 671495 18864575 ~ 18864807 (+)
G62741 NA non-coding upstream 763194 18772755 ~ 18773108 (+)
G63005 LOC104920315,LOC103374896,LOC100704901 non-coding downstream 9376 19549410 ~ 19554906 (+)
G63007 NA non-coding downstream 15349 19555383 ~ 19562350 (+)
G63015 LOC107394186,LOC104941583 non-coding downstream 35527 19575561 ~ 19633642 (+)
G63016 NA non-coding downstream 41938 19581972 ~ 19584473 (+)
G63029 NA non-coding downstream 116198 19656232 ~ 19656496 (+)
rasl10a rasl10a other upstream 87352 19430401 ~ 19448950 (+)
tmem119a LOC103353570,LOC104946818 other upstream 454648 19076561 ~ 19081654 (+)
mvk mvk,LOC102798305 other upstream 793903 18737518 ~ 18742399 (+)
acacb acacb other upstream 850839 18661157 ~ 18685463 (+)
tpcn1 tpcn1 other upstream 1061571 18441347 ~ 18474731 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 219562 19759596 ~ 19763524 (+)
vps13a vps13a other downstream 860913 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 933617 20473651 ~ 20490586 (+)
G63480 rbm19 other downstream 1136383 20676417 ~ 20677916 (+)
LOC120560787 NA other downstream 2048842 21588876 ~ 21599289 (+)

Expression


Co-expression Network