LOC120560449


Basic Information

Item Value
gene id LOC120560449
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2318287 ~ 2319276 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802993.1
AGCATTGTCATTATGTATGAATTGAATAAATTGACCCTCTGGGTAATGACAGGTCTGGTTGCTGTCACGACCGTCTTCTTTAATGGATACATCTTCTTGGTGAGTCTGTGGAACTACAGGCAGAACAAGAAGTGGAGTCCGTGTGAGACCATCATCCTGGCTCTGTCGATGGCCGACGTGGCTCACCAGCTGCTATGTTACTTCTGGATGACCATGGACGAGCTGGACAGTCAGTGCCACATGTCTGCGATGCCCTACACCGTCATGATGCTGTTAATCCACAGCCTCAAGTTCACCATCATGTGGGACACAGGCTTTCTCACTTTTTACTACAGCACCAAGCTGGTGCACACCCCCAATCACTGCTACACACAGATCCAGGCCGCCATCCTCAGGCACGTCACCTTAGCTGTTTGTCTCATCCCTCTGTGCGGCCTGGGCACCTGCATGCCCATGCTCTTGTTGTTTAACTCTGGCAACTTCACCTTAGCCAACAGAGCCTGTGGGGTTTTAATGCCCAACACGTCCTCTGGCCAGATCTACCAAGCCATGTTTCTGATCCTGGCTGATGTGCTGCCAGGGGTGCTCATGGTGAAATGCTgcatctccatctccatccacctGGCCATCCATCTCCGTCACATGAAAGCCAGCACCAACGCGGCGCACGGGCCCAAGCTGGGCACCCAGATGAGGGTGATCAAGATGGCTTTATCTCTAGTGCTCATCTTCATCCTCTGCCTCGCGGGCGACCTGTACGTCAACTACCAGATAATGGTGGACAGCGAGAACATCATCGTGCTCATGTTCTTCTTCACGTCCATCTACACGACTGTCACCGCCACGGTGCTGATCTACGGGAAAAAGACGTTCTGGAAAGCTCTGATACATGAATTGAACGTCTGCCTGGATATATATCCGTGTTTGGCTCGTCTGGAGGTCCCTGAACAAAAGGTGAAACCCAGCGCTCCTGCAAAAGTTCACACCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802993.1 True 990 mRNA 0.52 1 2318287 2319276

Neighbor

gene id symbol gene type direction distance location
cabin1 cabin1 coding downstream 55473 2217592 ~ 2262814 (-)
tbx16 LOC104928806,LOC103353632 coding downstream 101576 2207405 ~ 2216711 (-)
npy8br LOC104958550,LOC104939448 coding downstream 138400 2178275 ~ 2179887 (-)
fgfr1a LOC104936599,LOC103353638 coding downstream 195721 2088440 ~ 2122566 (-)
lgi3 lgi3 coding downstream 231743 2067890 ~ 2086544 (-)
vsig8b NA coding upstream 5710 2324986 ~ 2330823 (-)
lrrtm4l2 LOC104959582,LOC103353626 coding upstream 33797 2353073 ~ 2356270 (-)
LOC120560021 NA coding upstream 185196 2504472 ~ 2508814 (-)
LOC120560452 LOC104959125 coding upstream 217942 2537218 ~ 2537559 (-)
LOC120560454 NA coding upstream 232152 2551428 ~ 2552694 (-)
LOC120561446 NA non-coding downstream 135559 2179896 ~ 2182728 (-)
G58529 NA non-coding downstream 144967 2172439 ~ 2173320 (-)
G58521 NA non-coding downstream 171735 2146122 ~ 2146552 (-)
G58460 NA non-coding downstream 255348 2062670 ~ 2062939 (-)
G58472 NA non-coding downstream 255752 2062106 ~ 2062535 (-)
G58559 NA non-coding upstream 14703 2333979 ~ 2334189 (-)
G58560 NA non-coding upstream 15470 2334746 ~ 2335022 (-)
G58588 NA non-coding upstream 156996 2476272 ~ 2479608 (-)
LOC120561196 NA non-coding upstream 171991 2491267 ~ 2491794 (-)
G58596 NA non-coding upstream 198679 2517955 ~ 2518201 (-)
ankrd39 LOC103353637,LOC100700369 other downstream 178644 2137796 ~ 2139643 (-)
rimbp2 rimbp2,LOC107081823,LOC108247306,LOC103353655 other downstream 660239 1532053 ~ 1658048 (-)
LOC120560045 NA other downstream 2293338 17589 ~ 24949 (-)
LOC120560995 NA other upstream 230770 2550046 ~ 2551366 (-)
ggt1a ggt1,LOC102775580,LOC108234964 other upstream 258599 2577875 ~ 2592746 (-)
si:ch211-107p11.3 LOC103353652,LOC102075650,LOC108234931,LOC104950460 other upstream 366615 2685891 ~ 2689087 (-)
LOC120561394 LOC107097799,LOC103353613,LOC101077666 other upstream 371334 2690610 ~ 2692543 (-)
LOC120561349 donson,LOC102310661 other upstream 514912 2834188 ~ 2846607 (-)

Expression


Co-expression Network