LOC120560453


Basic Information

Item Value
gene id LOC120560453
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2537954 ~ 2539133 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802996.1
ATGTTGAGCCTGCCGCCCAGTTCCTCTAGGCACAGGAGCAAGACAGACTTAACACCTGCCCTGAATCCCCCTCCTCAAAGCAGGCCACCCACTGCCCAGGCTGAGCTTCCTCAGTCATCTTCCAGCTCACCAGCCAAGCTGTTTCAGTTTGCTGCATGCCCTCCTGCTGTTAAACCAGACGTGACTCCAAGTTCAACTCCTGAGCCTCAGACACGGCCAGAAACCAGAAGTCCGCTGTCTCTCCCCTTGCTTTCCTCACCATCTGGTGCTCGCACTGGACCTGTGAAGACAGGTAGGAGGGTGTTTGTGTTGGACCACAAGCGCTGGCCAACCCCTATGAAAAAGGCTATTGACGACCTGCTTAATAAACACCGTGGCCAGAAGGACGTGCTCAAGCTTGTAGACCAGGACTATGCTGGTCTAGTTCACAACTCCTGTAAAGACCCAAACAGCATGCTCCACCCAACAGCCAAACTACATATTGCACAGTATTTAAAGCACCTCAGCAAACTGTTAAACACCAGCTCCTCTTTAAACACCAGCCCGGAAAAACTGCAAGAGAGGCAGGAACTCTTGCACTCTCTGACCAAGGGGAGTACGACTACCAGTGTCTATTGAGAAAAtagttaaaaacataatggacaagcagcagcaacaacagccgGAACAAAAAAAGGCACAGACAAAAACGTGTCTTTCCTGTGGCCAGCCAAAGTCGAAGTATGAGAATGATGGTTCTTCCATCCACTTCTTTTACCAGCAAGGCCCTGTCAGGTATTTCTACTGCTCCACTAAGGTTTTTAAAGCCTATGGTGCTGAAGGTCTGACAAACCCAAAAATACCCTTTAATGACTCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802996.1 True 858 mRNA 0.50 2 2537954 2539133

Neighbor

gene id symbol gene type direction distance location
LOC120561412 lrrtm4,LOC104959581,LOC103353625,LOC101488074,LOC100703069,LOC102799547 coding upstream 103012 2365750 ~ 2434942 (+)
LOC120560154 nefl,LOC102797482,LOC104959585 coding upstream 271211 2262909 ~ 2266743 (+)
klhl22 klhl22 coding upstream 334888 2192912 ~ 2203066 (+)
LOC120560792 gnrh1 coding upstream 377327 2157612 ~ 2160627 (+)
kctd9a kctd9 coding upstream 381365 2140097 ~ 2156589 (+)
anapc5 anapc5,LOC102800026 coding downstream 21616 2560749 ~ 2577050 (+)
lrrc75ba lrrc75b,LOC104956515,LOC102775864 coding downstream 61757 2600890 ~ 2616973 (+)
asphd2 asphd2 coding downstream 91371 2630504 ~ 2634683 (+)
cabp1a cabp1,LOC100709699,LOC102206763,LOC102781601,LOC104946293 coding downstream 101019 2640152 ~ 2654597 (+)
mlec mlec coding downstream 117378 2656511 ~ 2662450 (+)
G58603 NA non-coding upstream 7231 2530492 ~ 2530723 (+)
G58601 NA non-coding upstream 11684 2526052 ~ 2526270 (+)
G58599 NA non-coding upstream 13387 2524207 ~ 2524567 (+)
G58598 NA non-coding upstream 14020 2523641 ~ 2523934 (+)
G58597 NA non-coding upstream 14316 2523439 ~ 2523638 (+)
G58618 ggt5,LOC104956559 non-coding downstream 84984 2624117 ~ 2625352 (+)
G58650 NA non-coding downstream 124270 2663403 ~ 2665691 (+)
G58651 NA non-coding downstream 126685 2665818 ~ 2667041 (+)
G58652 NA non-coding downstream 128125 2667258 ~ 2667835 (+)
G58653 NA non-coding downstream 128953 2668086 ~ 2668677 (+)
dock5 dock5 other upstream 225289 2273678 ~ 2312665 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 1700093 789405 ~ 837861 (+)
LOC120560799 NA other upstream 2325571 210742 ~ 212383 (+)
lman2lb NA other downstream 339241 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 896032 3435165 ~ 3522756 (+)
G59086 NA other downstream 1578146 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 1885008 4424141 ~ 4429981 (+)
trnal-aag_1 NA other downstream 1893038 4432171 ~ 4432253 (+)

Expression


Co-expression Network