LOC120560454


Basic Information

Item Value
gene id LOC120560454
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2551428 ~ 2552694 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802997.1
CTCCCTCATGAGCTGAGGTTTCTGATGCCAAAAACAAACATCATGGATGGTGAGGCAGGAAAGTATGACCTAAGAACCATCACTCAGTTCATAAGACAGGAAACCAAGCCAGTTCCCTTTGGAGAGTATGGGGATTCAGATGGCTGGAACGGGATCTCTGTGTCTGCACACTACCTAACTGACTGCCTACTGCATGAGTACAAACACCAGGAGGGTGCTATCACAAAGCTTCTTCAGGGCACCTTTGGACAGGCTTTCCGCTCAGACCACACACGGAAAGTTGCTAGGAAGGTCACCTTTTCATCTGGGACCATGTCATCATATGCAGTCATGAATGAGAACTGGATGATCCTTTCATGGGTGATGGTGCAGTCTGAGACAGAAAAGTCACTGAAGCCCATGTATGAAGGTGTAGCACACCGCTACAACACTGCAGGCATAGAGAAGGCACACTACCAGCGGGTAGACAGggATTGCTGCGCAGCATTTAAGGTTGCAGAATCTTACACAGGAGAGCACATGAACTGGGATGCTTGGACAACTACTAATGGCATTGTTGCTGATGCCACTACTGGTGACCTGCTGAACACCTGTGCATCAAGATCCCActacaataaaaacataattatcaAGCTGGACTTGTTCCACTGTTTGAGATGGTTCCTCCGTGAGTGTGTGTCAGAGCATCATCCCCTGTACAGTTCCTTTGCTCAGTTCCTGTCGGCAGCCTTTTCAGTGGTGGATCAGGAAGACCTGCAGAGGCTTAAAGAGGCAAATGCCTTCTGTGGCATTCAGCCTGCCAACCCAACAAAGGCACACATTTATGAGCACTGCAGGACCAGAATTCCACAGCCGGAGGAGCTCGCCAAGAGAGTCAAGGGAGTTTTCCAGCACTTTTACCTCGCAACTGATCAAAACGGCGTTCCTCTCTTCAAGCCCTCTATGCTGAAGACATTCAGCGCATACACATCTTGCGCGGGTGCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802997.1 True 987 mRNA 0.49 3 2551428 2552694

Neighbor

gene id symbol gene type direction distance location
LOC120560452 LOC104959125 coding downstream 13869 2537218 ~ 2537559 (-)
LOC120560021 NA coding downstream 42614 2504472 ~ 2508814 (-)
lrrtm4l2 LOC104959582,LOC103353626 coding downstream 195158 2353073 ~ 2356270 (-)
vsig8b NA coding downstream 220605 2324986 ~ 2330823 (-)
LOC120560449 NA coding downstream 232152 2318287 ~ 2319276 (-)
ggt5a ggt5 coding upstream 66521 2619215 ~ 2627761 (-)
si:ch211-170d8.2 NA coding upstream 114568 2667262 ~ 2671095 (-)
hps4 hps4,LOC102793116 coding upstream 117540 2670234 ~ 2683703 (-)
LOC120561357 NA coding upstream 300614 2853308 ~ 2855703 (-)
zgc:162952 LOC103356462,LOC104930869,LOC101468259,LOC102311328,LOC100693656 coding upstream 462915 3015609 ~ 3042256 (-)
G58596 NA non-coding downstream 33227 2517955 ~ 2518201 (-)
LOC120561196 NA non-coding downstream 59634 2491267 ~ 2491794 (-)
G58588 NA non-coding downstream 71820 2476272 ~ 2479608 (-)
G58560 NA non-coding downstream 216406 2334746 ~ 2335022 (-)
G58559 NA non-coding downstream 217239 2333979 ~ 2334189 (-)
G58625 NA non-coding upstream 3951 2556645 ~ 2556863 (-)
G58678 NA non-coding upstream 163207 2715901 ~ 2716316 (-)
G58716 NA non-coding upstream 249048 2801742 ~ 2801971 (-)
G58725 NA non-coding upstream 260677 2813371 ~ 2813695 (-)
G58748 NA non-coding upstream 320661 2873355 ~ 2873629 (-)
LOC120560995 NA other downstream 62 2550046 ~ 2551366 (-)
ankrd39 LOC103353637,LOC100700369 other downstream 411785 2137796 ~ 2139643 (-)
rimbp2 rimbp2,LOC107081823,LOC108247306,LOC103353655 other downstream 893380 1532053 ~ 1658048 (-)
LOC120560045 NA other downstream 2526479 17589 ~ 24949 (-)
ggt1a ggt1,LOC102775580,LOC108234964 other upstream 25181 2577875 ~ 2592746 (-)
si:ch211-107p11.3 LOC103353652,LOC102075650,LOC108234931,LOC104950460 other upstream 133197 2685891 ~ 2689087 (-)
LOC120561394 LOC107097799,LOC103353613,LOC101077666 other upstream 137916 2690610 ~ 2692543 (-)
LOC120561349 donson,LOC102310661 other upstream 281494 2834188 ~ 2846607 (-)
tnc tnc,LOC104930867,LOC103356464 other upstream 496975 3049669 ~ 3134549 (-)

Expression


Co-expression Network