mtmr3 (mtmr3)


Basic Information

Item Value
gene id mtmr3
gene name mtmr3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 8055365 ~ 8078168 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803082.1
agccgtcagacagcgttacagcacgcacggagatgagaaggGCTGCTCCAGGCCGGACTCTCTTGTCGGGTGACCCGCACTCCTTCCCAGGGGCCATGgaGGAGGAAGGGCAGCAGAGCTTGGAATGTATCCAGGCCAATCAAATCTTCCCCAAGAAGTCCCCCGTTCTTGAGGAGGAAAACATGCAGGTGCCCTTTCCTGAGCTGCATGGCGAGTTCACAGAGTATGTGGGGAGAGCAGAGGATGCCATCATCGCAATATCTAACTACCGCCTACACATCAAGTTCAAAGAGTCCGTTGTCAACAGTTGTTGTTGTGAGGTGTCAGTTCCTCTTCAGCTCATAGAGAACTCGGAGTGTCGGGATATGTTCCAGCTTCATGTCACCTGCAAGGACTGTAAAGTCGTCAGGTGCCAGTTCTCCACCTTTGAGCAGTGTCAGGAATGGCTAAAACGCCTGAACGCAGTAGTGCGCCCTCCCTCCCGCCTGGAGGACCTCTTCTCCTTCGCCTTCCACGCCTGGTGCATGGAGGTATATGCCGGCGAGAAGGAGCAGCACGGCGAGCTATGCAGACCAGGCGAACACGTGACCTCCTGGTTCAAGAACGAGGTGGAGAGGATGTGCTTTGACACTCAAAACGCCTGGAGGATATCGGACATCAACAGCAAGTTCAGGCTTTGCCCCAGCTATCCCCAGCAGCTCCTGGTGCCAGCCTGGATCACTGACAAGGAGCTGGAAAATGTGGCAGCCTTCCGCTCCTGGAAGAGGTTTCCTGCTGTGGTTTATAGGCACCAGACCACGGGAGCTGTGATTGCCCGCTGCGGCCAGCCAGAGGTCAGCTGGTGGGGCTGGAGGAACGCAGATGATGAGCACCTGGTCCAGTCCATCGCCAAGGCCTGCGCCGTGGACAGCAGCTCCCGCAAACACCTTTCCAACGGCAGCTACACCAACGGCAACGACCTGCCTGATACTGACTTTGaaTCCTCCATGACCAACAGCGCAGAGGTGGAGACGTTGGCTACCCAGCCCCACAAGTTACTGATTCTGGATGCCAGGTCCTACGCTGCTGCCGTAGCTAACAGGGCCAAGGGGGGAGGCTGTGAATGCCCAGAGTACTATCCCAACTGTGAGGTGGTGTTTATGGGCATGGCCAACATCCACTCCATCCGCAAGAGTTTCCAGTCTCTGCGTTTCCTCTGCACTCAGATGCCTGATCCGGCCAACTGGCTGTCTGCACTGGAGAGCACCAAGTGGCTGCAGCACCTGTCCCTGCTGCTGAAGGCGGCGCTGCTGGTGGTGAACGCTGTGGACCGAGACCACAGGCCTGTCCTGGTGCACTGCTCTGACGGCTGGGACCGCACACCTCAGATCGTAGCTTTGTCCAAGCTGCTGCTGGACCCTTACTACCGCACTGTGGAGGGCTTCCAGGTTTTGGTGGAGACTGATTGGCTGGACTTCGGCCATAAGTTTGCCGACCGCTGCGGCCATGGAGAAAACTCTGAGGACCTGAACGAGCGCTGCCCCGTCTTCCTGCAGTGGCTGGACTGTGTTCACCAGCTGCAGAGGCAGTTCCCATGCTCCTTTGAGTTTAACGAGGCCTTCCTGgtGAAACTGGTGCAGCACACCTACTCCTGTCTTTTCGGCACCTTCCTGTGTAACAGCGGCAAGGAGAGGGAGGACCGTCACGTTCAGGAGAGGACCTGCTCAGTCTGGTCACTGCTGAGACCGGCCAACCGCACTCTGAGGAACATGCTGTACTCCACACACTCCGAGATAGTTCTTCACCCAGTGTGTCATGTACGCAACCTGATGCTGTGGACGGCTGTCTACCTGCCCAGTtcctcccccaccaccccctCCGATGAATCCTGCGCCCCCTACCCTGTGCCGGGTTGCAACCCTGAGGACGCGCCCTTGGGCAGACGTACGAAGACTCGCTCCTTCGACAACTTGCCCAGTGCATGTGAGCTGGGAAGCTCGCTGGCTCCTAACCGCCGCTCCAGTGACCCGAGTCTCAATGAGAAGTGGCAGGACCACCGGCGCTCTCTGGAGCTCAACATGGCAGTGGGGCCTGAGGGAGGGGGAAACCAGGATCAGGAGGTGCGGCCTAACGGAGTGGGGCCTTACCCAGACGGAGTGGACTCTGAGCTGGAAGACAGCCCACAGCCCCAGGGCTCGCATGCTGAGCTCGGACAGGAAGCCTCTGCGAGCACCGCTGAAACCGGGGCGGACGCTGAGAAGGCGGAGCTCTCTGTGGCGGTGGGCGTGGCTGAGGGCCAGATGGAGAACATTCTTAAGGAAGCCACTAAGGAGGAGGCGGGAGCAGATGTTCAGAGAGAGGGAAGTGCTGCTGTCACACATGTCATCAACACTGTTGACACAGAATTCCAGAAGGAAGCAAAAGTTCAAGAGGATGACGAGTGTGCTAAGGTCAATGGGACTGAGATGCAGAGAGAAGCGTTTACCAATGGTCACCATCTAGAAAATGGCGTAATGGAGGCAGAGGAGGTTGATGAGTCTCCCCCTCTGCCCACACAGAAGGCAGAGGAGCTGGATCAACAGGCAGCTGAGGTGACTCAGTCACCAGAGGACCTGGTGAAGCAGGACGCAGAGAACTGTTCTGTACCAGAGGAGCTTGCACATGGACCCAGCGAGTCCAGCTCAGGTGAGCCCGAGCAGCCTGCAGCCCATAGAACTATAACAAACGGCTTTGTGGACAGGTCACCTGAAGAGCCAGGAGTGGATGAGGAGACCAGCCCTGACTCTGAATCTGACAACGGTGTCTCCGAGCCAGTGGAGCAGGGGGATAAGAGGGCCTCCCTGATGGAAAGCTCCACAGAGACTTTAACTGAAGAAGCCTGTAGCAGGTTGGAGCTACCAGCACAGCCGCCGGTTTGTCCCAGTCATCAGCCCTGCAGTGATGGCAGGAACCAACCGCCCTGCTCCAGGAAGGAGAAAGGACTGGAGACAGGCGAACAAGgctttatcagaactttaaacGGGGGCAGCAAGCGGCCCTCTGTCAGTGCCTTTCAGTCTGTGAGTGCTGACCTCAACAGGGAAGGGCTTTGTAACGGCGAGAGGCCCTGA

Function

symbol description
mtmr3 Predicted to enable phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity; phosphatidylinositol-3-phosphatase activity; and protein phosphatase binding activity. Predicted to be involved in phosphatidylinositol dephosphorylation and regulation of autophagy. Predicted to act upstream of or within dephosphorylation and lipid metabolic process. Predicted to be active in cytoplasm and membrane. Orthologous to human MTMR3 (myotubularin related protein 3).

NR:

description
PREDICTED: myotubularin-related protein 3 isoform X1

GO: NA

KEGG:

id description
K18082 MTMR3_4, ZFYVE10_11; myotubularin-related protein 3/4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803082.1 True 3089 mRNA 0.58 17 8055365 8078168

Neighbor

gene id symbol gene type direction distance location
rad9b NA coding upstream 141845 7904789 ~ 7913520 (+)
LOC120560606 NA coding upstream 150771 7898563 ~ 7904594 (+)
LOC120560607 LOC106931442,LOC103152401,LOC103469522,LOC102221826,LOC101074150,LOC101161315,LOC105014186,LOC106579958,LOC103397036 coding upstream 154841 7888678 ~ 7900524 (+)
ift81 ift81 coding upstream 209560 7821305 ~ 7845805 (+)
LOC120561497 NA coding upstream 356114 7699133 ~ 7699251 (+)
LOC120560501 mtmr3,LOC103152423 coding downstream 134 8078302 ~ 8083374 (+)
bicdl1 bicdl1 coding downstream 94392 8172560 ~ 8204186 (+)
LOC120560868 NA coding downstream 253217 8331385 ~ 8402569 (+)
LOC120560867 NA coding downstream 309654 8387822 ~ 8389118 (+)
LOC120560486 LOC107690107 coding downstream 387003 8465171 ~ 8482178 (+)
G59931 pptc7,LOC106585473,LOC104951761 non-coding upstream 130809 7920777 ~ 7924556 (+)
G59839 NA non-coding upstream 408216 7646705 ~ 7647149 (+)
G59837 NA non-coding upstream 419311 7635595 ~ 7636054 (+)
G59826 NA non-coding upstream 424124 7630506 ~ 7631241 (+)
G59833 NA non-coding upstream 466735 7587795 ~ 7588630 (+)
G60082 NA non-coding downstream 148724 8226892 ~ 8227173 (+)
G60084 gcn1 non-coding downstream 153836 8232004 ~ 8238788 (+)
G60080 NA non-coding downstream 224090 8302258 ~ 8313113 (+)
G60109 NA non-coding downstream 246885 8325053 ~ 8326953 (+)
G60120 NA non-coding downstream 294098 8372266 ~ 8372551 (+)
cux2b cux2,LOC102795992 other upstream 4025 7947252 ~ 8051340 (+)
atp2a2a atp2a2,LOC102794349,LOC101476777,LOC102310403 other upstream 176994 7847671 ~ 7878371 (+)
zbtb26 LOC104940087,LOC100710858,LOC102306976,LOC102206222,LOC101473380,LOC102792103 other upstream 425185 7625736 ~ 7630180 (+)
susd1 susd1 other upstream 431650 7600092 ~ 7623715 (+)
LOC120560567 ier3ip1,yee9,LOC103361062,LOC100710589,LOC107393509,LOC105014506,LOC103152384 other upstream 479229 7574725 ~ 7576136 (+)
LOC120560006 NA other downstream 345021 8423189 ~ 8427745 (+)
LOC120560007 NA other downstream 353369 8431537 ~ 8434672 (+)
vps37ba vps37b,vps37c,LOC102776795 other downstream 913273 8991441 ~ 9014903 (+)
ppp3cca LOC104934810,LOC100705072,LOC105915415,LOC101486266,LOC102777092,LOC103366803,LOC102200614,LOC101072650,LOC106932221 other downstream 939723 9017891 ~ 9055765 (+)
LOC120560959 golga7,LOC104937560,LOC106585131 other downstream 1848782 9926950 ~ 9981054 (+)

Expression


Co-expression Network