akr1a1a (LOC103357443,LOC100534433)


Basic Information

Item Value
gene id akr1a1a
gene name LOC103357443,LOC100534433
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 18282370 ~ 18287282 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803088.1
CAGCTGATCACTGCTCCGTCTACCAGAGCGATCACGGATCATCAGGATTGAAACATGAGTGCCTTCGTGACTCTCTCAACAGGCCAGAGGATGCCCGTGGTCGGACTCGGCACATGGAAGAGCGGCCCAGGACAGGTGAAGCAGGCAGTGCTGGCAGCTTTAGACTGTGGCTACAGACACATTGACTGTGCTGCAGCATACAGCAATGAACAGGAGGTGGGAGAGGCTCTGTCTACCAGGCTCGGCCCAGGGAAGGCTCTGCGTCGCGAGGAGGTGTTTGTAACATCCAAACTGTGGAACACCAAACATGACCCGGAGGATGTTGAGGAAGCGTGCAGGACCAGTCTGGCCCACCTGGGTCTCTCCTATTTGGACCTGTACCTTATGCACTGGCCCATGGCATTTCAGCGGGGGAAGGAGCTGATGCCTCGACGAGAAGATGGAAGTGTTTGTTACTCTGACACACACTACAGAGATACTTGGGCAGCCATGGAGAGCCTAGTGGACAAAGGTCTGGTCAAAGCTATAGGACTGTCCAACTTCAATGCCAGGCAgactgatgacatcatcagcatGGCCAGACACACACCTGTGGTTAACCAGGTGGAATGCCATCCTTATTTGTCTCAAACAGATCTCCTGTCTCACTGTCGGTCCGTGGCGGTTTGTGTGACAGCCTACAGTCCTCTGGGCAGCGGGGACAGACCCTGGGCCTCTCCTGATGAACCAAGTCTGCTACAGGATCCTCAACTGGGAGCCATCGCCCAGAGATACCAGAAAACACCTGCCCAGCTCATTCTCAGGTGGCATGTTCAGAGGGGTGTCGTGTGTATTCCTAAAAGTGTGACGCCCGCAAGGATCCGGCAGAACTTGCAGGTGTTTGACTTTTCTCTGTCAGAAGACGACATGAAGCTGATCGAATCCTTCAACCGCAACGAGCGCTTCATTGTCCCAGCAGTCAAGagagaTGGCAAGAGTGTGTGGAGAGATGCAGAACATCCTCATTTCCCCTTCAATGATCCTTACTGAGTCTACACACAAAGAATGCAATACGGTCTTTAAAATTGACTGTCACACACACTGAAGAAACCAAGTATCTAAACTGAACTCAAATATGATCAAATGTATTTTCCCTTTGGgatgaatattaatatttaaatgacTTAATTTGTAAAAGAAAGTGCTTGAATCATGTTTTCCCAATCACTTCTTTAGTGTGATTATAGTGAAGAATAAAGTGACTGCCACTGCCAGAGTGACACTATGTGGTCAGTATAAGAACTGCCCAATGACCATAGCTTTGATCAACTGCATATTTTACAgtttagaccaggggtcaccaacctttttgaaacaGAGCTACTTCGTAaatattgagtcatacgaagggctaccagtttgatacactcttctgaaataacaaatttgctctgtttgcctttagttatacaTGATTCTTAACGATACTCCTCTATGTGAAGAAACTGATCATGTTATAATTATCAATCAATAATTatcaatgacttaacaaggtgggaaacggATATCaaaattcaattttcatttttagaacaggcctgagggctactcgtggtccttgggggctacctggtgcccgcgggcaccgtgttggtgaccccggTTTAGACTCTTTGAAGAGTAAATCACTGAACAGCAGCACTGCTCGGAGATTAAGCTTTTTATCCCTCTTTCGTGTCTGTCTCTACTGTAAAAACTatcaaatgtattattaaaaatgtacatgaactataaataaaagaagTTTCAAAACGGA

Function

NR:

description
alcohol dehydrogenase [NADP(+)] A-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K00011 AKR1B; aldehyde reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803088.1 True 1795 mRNA 0.46 9 18282370 18287282

Neighbor

gene id symbol gene type direction distance location
dnajb5 dnajb5,LOC102783367 coding upstream 2258 18270719 ~ 18280112 (+)
epg5 epg5 coding upstream 13789 18245501 ~ 18268581 (+)
LOC120560024 lix1 coding upstream 37597 18239308 ~ 18244773 (+)
riok2 riok2 coding upstream 44371 18232728 ~ 18237999 (+)
slc14a2 slc14a1,LOC100693008,LOC103357096 coding upstream 143036 18133647 ~ 18139334 (+)
LOC120560506 nefh,LOC102784691 coding downstream 19616 18306898 ~ 18311633 (+)
srrd srrd coding downstream 39682 18326964 ~ 18328537 (+)
ddhd2 ddhd2 coding downstream 58272 18345554 ~ 18357632 (+)
LOC120560725 NA coding downstream 78463 18365745 ~ 18382595 (+)
si:ch211-113d22.2 LOC106098714,LOC103357453,LOC102788116 coding downstream 95667 18382949 ~ 18386253 (+)
G62406 NA non-coding upstream 154625 18127536 ~ 18127745 (+)
G62372 NA non-coding upstream 226221 18054799 ~ 18056149 (+)
G62344 NA non-coding upstream 341524 17939027 ~ 17940846 (+)
G62294 NA non-coding upstream 468557 17813589 ~ 17813813 (+)
G62280 NA non-coding upstream 524313 17757855 ~ 17758057 (+)
G62484 vcp,LOC102783844,LOC103357444,LOC107746855,LOC107393925 non-coding downstream 5978 18293260 ~ 18296903 (+)
G62502 thoc5 non-coding downstream 25929 18313211 ~ 18314777 (+)
G62508 NA non-coding downstream 33361 18320643 ~ 18321158 (+)
G62533 NA non-coding downstream 77998 18365280 ~ 18388485 (+)
G62540 NA non-coding downstream 170216 18457498 ~ 18459249 (+)
setbp1 setbp1,LOC102781608 other upstream 153301 18074768 ~ 18129069 (+)
thbs4a thbs4,LOC104953147,LOC106958346 other upstream 252984 18015405 ~ 18029386 (+)
cmya5 cmya5,LOC106958347,LOC104953151 other upstream 271340 17998686 ~ 18011030 (+)
tmem167a tmem167a,LOC103397084 other upstream 709665 17568013 ~ 17572705 (+)
LOC120560947 edil3 other upstream 867775 17285648 ~ 17414595 (+)
G62513 NA other downstream 43423 18330705 ~ 18331230 (+)
tbx5b tbx5,LOC103470367 other downstream 120066 18407348 ~ 18419590 (+)
tpcn1 tpcn1 other downstream 154065 18441347 ~ 18474731 (+)
acacb acacb other downstream 373875 18661157 ~ 18685463 (+)
mvk mvk,LOC102798305 other downstream 450236 18737518 ~ 18742399 (+)

Expression


Co-expression Network